RNA–Protein interactions for RNA: ENST00000370576.8

MCF2-203, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MCF2, Length 3,688 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-203ENST00000370576 WDR87Q6ZQQ6 2873 aa3.23□□□□□ -1.89
MCF2-203ENST00000370576 LAMA1P25391 3075 aa3.23□□□□□ -1.89
MCF2-203ENST00000370576 TRAV18A0A075B6X5 111 aa3.23□□□□□ -1.89
MCF2-203ENST00000370576 LOC101059948A0A1B0GTJ6 334 aa3.23□□□□□ -1.89
MCF2-203ENST00000370576 CPSF4LA6NMK7 179 aaKnown RBP3.23□□□□□ -1.89
MCF2-203ENST00000370576 PPP5D1E7EU14 171 aa3.23□□□□□ -1.89
MCF2-203ENST00000370576 S1PR2O95136 353 aa3.23□□□□□ -1.89
MCF2-203ENST00000370576 GADD45AP24522 165 aa3.23□□□□□ -1.89
MCF2-203ENST00000370576 RORCP51449 518 aa3.23□□□□□ -1.89
MCF2-203ENST00000370576 TDGF1P3P51864 188 aa3.23□□□□□ -1.89
MCF2-203ENST00000370576 CD164Q04900 197 aa3.23□□□□□ -1.89
MCF2-203ENST00000370576 RIGQ13278 110 aa3.23□□□□□ -1.89
MCF2-203ENST00000370576 TRIP6Q15654 476 aaKnown RBP3.23□□□□□ -1.89
MCF2-203ENST00000370576 OR10J3Q5JRS4 329 aa3.23□□□□□ -1.89
MCF2-203ENST00000370576 DCAF12Q5T6F0 453 aa3.23□□□□□ -1.89
MCF2-203ENST00000370576 PRAMEF17Q5VTA0 474 aa3.23□□□□□ -1.89
MCF2-203ENST00000370576 TRIQKQ629K1 86 aa3.23□□□□□ -1.89
MCF2-203ENST00000370576 MOB3BQ86TA1 216 aa3.23□□□□□ -1.89
MCF2-203ENST00000370576 IFNEQ86WN2 208 aa3.23□□□□□ -1.89
MCF2-203ENST00000370576 WFDC8Q8IUA0 241 aa3.23□□□□□ -1.89
MCF2-203ENST00000370576 Q8N9G6 341 aaPredicted RBP3.23□□□□□ -1.89
MCF2-203ENST00000370576 ATP6V1C2Q8NEY4 427 aa3.23□□□□□ -1.89
MCF2-203ENST00000370576 OR1S2Q8NGQ3 325 aa3.23□□□□□ -1.89
MCF2-203ENST00000370576 DUSP13Q9UII6 198 aa3.23□□□□□ -1.89
MCF2-203ENST00000370576 TRIOO75962 3097 aa3.23□□□□□ -1.89
MCF2-203ENST00000370576 VCANP13611 3396 aa3.23□□□□□ -1.89
MCF2-203ENST00000370576 NPIPA5A0A0B4J1W7 369 aa3.23□□□□□ -1.89
MCF2-203ENST00000370576 A0A0G2JN53 185 aa3.23□□□□□ -1.89
MCF2-203ENST00000370576 ZNF814B7Z6K7 855 aa3.23□□□□□ -1.89
MCF2-203ENST00000370576 NPIPA5E9PKD4 350 aa3.23□□□□□ -1.89
MCF2-203ENST00000370576 SLC2A10O95528 541 aa3.23□□□□□ -1.89
MCF2-203ENST00000370576 CCL4P13236 92 aa3.23□□□□□ -1.89
MCF2-203ENST00000370576 CXCR1P25024 350 aa3.23□□□□□ -1.89
MCF2-203ENST00000370576 RPL4P36578 427 aaKnown RBP3.23□□□□□ -1.89
MCF2-203ENST00000370576 AKR1C3P42330 323 aa3.23□□□□□ -1.89
MCF2-203ENST00000370576 OR1D4P47884 311 aa3.23□□□□□ -1.89
MCF2-203ENST00000370576 DLX1P56177 255 aa3.23□□□□□ -1.89
MCF2-203ENST00000370576 TMEM236Q5W0B7 351 aa3.23□□□□□ -1.89
MCF2-203ENST00000370576 HBMQ6B0K9 141 aa3.23□□□□□ -1.89
MCF2-203ENST00000370576 PAMR1Q6UXH9 720 aa3.23□□□□□ -1.89
MCF2-203ENST00000370576 DCDC5Q6ZRR9 648 aa3.23□□□□□ -1.89
MCF2-203ENST00000370576 CADM2Q8N3J6 435 aa3.23□□□□□ -1.89
MCF2-203ENST00000370576 OR4C13Q8NGP0 309 aa3.23□□□□□ -1.89
MCF2-203ENST00000370576 DUX3Q96PT4 197 aa3.23□□□□□ -1.89
MCF2-203ENST00000370576 MICU1Q9BPX6 476 aa3.23□□□□□ -1.89
MCF2-203ENST00000370576 TM2D1Q9BX74 207 aa3.23□□□□□ -1.89
MCF2-203ENST00000370576 CARHSP1Q9Y2V2 147 aaKnown RBP3.23□□□□□ -1.89
MCF2-203ENST00000370576 UFC1Q9Y3C8 167 aa3.23□□□□□ -1.89
MCF2-203ENST00000370576 ETV7Q9Y603 341 aa3.23□□□□□ -1.89
MCF2-203ENST00000370576 SPIN1Q9Y657 262 aaPredicted RBP3.23□□□□□ -1.89
MCF2-203ENST00000370576 MYO9BQ13459 2157 aa3.23□□□□□ -1.89
MCF2-203ENST00000370576 MYO15AQ9UKN7 3530 aa3.23□□□□□ -1.89
MCF2-203ENST00000370576 TRBV6-6A0A0A6YYG2 114 aa3.22□□□□□ -1.89
MCF2-203ENST00000370576 PINLYPA6NC86 204 aa3.22□□□□□ -1.89
MCF2-203ENST00000370576 F8W735 103 aaPredicted RBP3.22□□□□□ -1.89
MCF2-203ENST00000370576 TAAR5O14804 337 aa3.22□□□□□ -1.89
MCF2-203ENST00000370576 SLC22A5O76082 557 aa3.22□□□□□ -1.89
MCF2-203ENST00000370576 IGHG2P01859 326 aa3.22□□□□□ -1.89
MCF2-203ENST00000370576 OR10J4P0C629 311 aa3.22□□□□□ -1.89
MCF2-203ENST00000370576 TFPIP10646 304 aa3.22□□□□□ -1.89
MCF2-203ENST00000370576 PSMB1P20618 241 aaKnown RBP3.22□□□□□ -1.89
MCF2-203ENST00000370576 ADMP35318 185 aa3.22□□□□□ -1.89
MCF2-203ENST00000370576 RPS19P39019 145 aaKnown RBP3.22□□□□□ -1.89
MCF2-203ENST00000370576 NANOS3P60323 173 aaKnown RBP3.22□□□□□ -1.89
MCF2-203ENST00000370576 PIGFQ07326 219 aa3.22□□□□□ -1.89
MCF2-203ENST00000370576 ZNF415Q09FC8 603 aa3.22□□□□□ -1.89
MCF2-203ENST00000370576 SPDYE7PQ495Y7 208 aa3.22□□□□□ -1.89
MCF2-203ENST00000370576 FFAR4Q5NUL3 377 aa3.22□□□□□ -1.89
MCF2-203ENST00000370576 FAM27BQ5VT28 67 aa3.22□□□□□ -1.89
MCF2-203ENST00000370576 OR1B1Q8NGR6 318 aa3.22□□□□□ -1.89
MCF2-203ENST00000370576 C4orf45Q96LM5 186 aa3.22□□□□□ -1.89
MCF2-203ENST00000370576 OR51J1Q9H342 316 aa3.22□□□□□ -1.89
MCF2-203ENST00000370576 ZNF556Q9HAH1 456 aa3.22□□□□□ -1.89
MCF2-203ENST00000370576 ABRACLQ9P1F3 81 aa3.22□□□□□ -1.89
MCF2-203ENST00000370576 FBXL2Q9UKC9 423 aa3.22□□□□□ -1.89
MCF2-203ENST00000370576 FARSAQ9Y285 508 aaKnown RBP3.22□□□□□ -1.89
MCF2-203ENST00000370576 LHFPL6Q9Y693 200 aa3.22□□□□□ -1.89
MCF2-203ENST00000370576 ABCA7Q8IZY2 2146 aa3.22□□□□□ -1.89
MCF2-203ENST00000370576 ZC3H12DA2A288 527 aaKnown RBP3.22□□□□□ -1.89
MCF2-203ENST00000370576 MSTNO14793 375 aa3.22□□□□□ -1.89
MCF2-203ENST00000370576 FOXH1O75593 365 aa3.22□□□□□ -1.89
MCF2-203ENST00000370576 UPK1BO75841 260 aa3.22□□□□□ -1.89
MCF2-203ENST00000370576 PTTG1O95997 202 aa3.22□□□□□ -1.89
MCF2-203ENST00000370576 CA1P00915 261 aaPredicted RBP3.22□□□□□ -1.89
MCF2-203ENST00000370576 IGLV1-44P01699 117 aa3.22□□□□□ -1.89
MCF2-203ENST00000370576 FAM87AP0C7U9 286 aa3.22□□□□□ -1.89
MCF2-203ENST00000370576 GKN3PP0CG01 181 aa3.22□□□□□ -1.89
MCF2-203ENST00000370576 RFX2P48378 723 aa3.22□□□□□ -1.89
MCF2-203ENST00000370576 CFHR3Q02985 330 aa3.22□□□□□ -1.89
MCF2-203ENST00000370576 FOXF1Q12946 379 aa3.22□□□□□ -1.89
MCF2-203ENST00000370576 UNC119Q13432 240 aa3.22□□□□□ -1.89
MCF2-203ENST00000370576 ATP6V1FQ16864 119 aa3.22□□□□□ -1.89
MCF2-203ENST00000370576 MARCH3Q86UD3 253 aa3.22□□□□□ -1.89
MCF2-203ENST00000370576 RFLNBQ8N5W9 214 aa3.22□□□□□ -1.89
MCF2-203ENST00000370576 TCEANCQ8N8B7 351 aa3.22□□□□□ -1.89
MCF2-203ENST00000370576 KBTBD8Q8NFY9 601 aa3.22□□□□□ -1.89
MCF2-203ENST00000370576 OR10G9Q8NGN4 311 aa3.22□□□□□ -1.89
MCF2-203ENST00000370576 DOK4Q8TEW6 326 aa3.22□□□□□ -1.89
MCF2-203ENST00000370576 DDIT4LQ96D03 193 aa3.22□□□□□ -1.89
MCF2-203ENST00000370576 DSCAML1Q8TD84 2053 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms