RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 SEMA5BQ9P283 1151 aa11.62□□□□□ -0.55
PRKN-205ENST00000366897 RPL36A-HNRNPH2H7BZ11 118 aa11.62□□□□□ -0.55
PRKN-205ENST00000366897 CXCL13O43927 109 aa11.62□□□□□ -0.55
PRKN-205ENST00000366897 IFNA5P01569 189 aa11.62□□□□□ -0.55
PRKN-205ENST00000366897 BCL2P10415 239 aa11.62□□□□□ -0.55
PRKN-205ENST00000366897 PSG2P11465 335 aa11.62□□□□□ -0.55
PRKN-205ENST00000366897 ERVS71-1P61550 626 aa11.62□□□□□ -0.55
PRKN-205ENST00000366897 RTP5Q14D33 572 aa11.62□□□□□ -0.55
PRKN-205ENST00000366897 PRSS8Q16651 343 aa11.62□□□□□ -0.55
PRKN-205ENST00000366897 STX12Q86Y82 276 aa11.62□□□□□ -0.55
PRKN-205ENST00000366897 OR56B2PQ8NGI1 322 aa11.62□□□□□ -0.55
PRKN-205ENST00000366897 OR4X1Q8NH49 305 aa11.62□□□□□ -0.55
PRKN-205ENST00000366897 RDH5Q92781 318 aa11.62□□□□□ -0.55
PRKN-205ENST00000366897 PLK3Q9H4B4 646 aa11.62□□□□□ -0.55
PRKN-205ENST00000366897 TSTD3H0UI37 97 aa11.61□□□□□ -0.55
PRKN-205ENST00000366897 HS3ST1O14792 307 aa11.61□□□□□ -0.55
PRKN-205ENST00000366897 ZNF16P17020 682 aaPredicted RBP11.61□□□□□ -0.55
PRKN-205ENST00000366897 RPS16P62249 146 aaKnown RBP11.61□□□□□ -0.55
PRKN-205ENST00000366897 CCL7P80098 99 aa11.61□□□□□ -0.55
PRKN-205ENST00000366897 USF2Q15853 346 aaPredicted RBP11.61□□□□□ -0.55
PRKN-205ENST00000366897 REC114Q7Z4M0 266 aa11.61□□□□□ -0.55
PRKN-205ENST00000366897 WDR5BQ86VZ2 330 aa11.61□□□□□ -0.55
PRKN-205ENST00000366897 Q9N2K0 584 aa11.61□□□□□ -0.55
PRKN-205ENST00000366897 PLA2G3Q9NZ20 509 aa11.61□□□□□ -0.55
PRKN-205ENST00000366897 ZNF292O60281 2723 aa11.61□□□□□ -0.55
PRKN-205ENST00000366897 GVINP1Q7Z2Y8 2422 aa11.61□□□□□ -0.55
PRKN-205ENST00000366897 OR6C6A6NF89 314 aa11.61□□□□□ -0.55
PRKN-205ENST00000366897 ZNF705GA8MUZ8 300 aaPredicted RBP11.61□□□□□ -0.55
PRKN-205ENST00000366897 GFRA3O60609 400 aa11.61□□□□□ -0.55
PRKN-205ENST00000366897 PGLYRP1O75594 196 aaPredicted RBP11.61□□□□□ -0.55
PRKN-205ENST00000366897 HBE1P02100 147 aa11.61□□□□□ -0.55
PRKN-205ENST00000366897 UCP1P25874 307 aa11.61□□□□□ -0.55
PRKN-205ENST00000366897 AAED1Q7RTV5 226 aa11.61□□□□□ -0.55
PRKN-205ENST00000366897 KMT5CQ86Y97 462 aa11.61□□□□□ -0.55
PRKN-205ENST00000366897 RPUSD4Q96CM3 377 aaKnown RBP11.61□□□□□ -0.55
PRKN-205ENST00000366897 RCC1LQ96I51 464 aaKnown RBP11.61□□□□□ -0.55
PRKN-205ENST00000366897 FOXB1Q99853 325 aa11.61□□□□□ -0.55
PRKN-205ENST00000366897 ELOVL1Q9BW60 279 aa11.61□□□□□ -0.55
PRKN-205ENST00000366897 OR2H1Q9GZK4 316 aa11.61□□□□□ -0.55
PRKN-205ENST00000366897 RBKSQ9H477 322 aa11.61□□□□□ -0.55
PRKN-205ENST00000366897 A0A096LPE4 126 aa11.61□□□□□ -0.55
PRKN-205ENST00000366897 A0A1W2PPZ6 126 aa11.61□□□□□ -0.55
PRKN-205ENST00000366897 PKIAP61925 76 aa11.61□□□□□ -0.55
PRKN-205ENST00000366897 COL10A1Q03692 680 aa11.61□□□□□ -0.55
PRKN-205ENST00000366897 P2RY6Q15077 328 aa11.61□□□□□ -0.55
PRKN-205ENST00000366897 CPEB3Q8NE35 698 aaKnown RBP11.61□□□□□ -0.55
PRKN-205ENST00000366897 OR5T1Q8NG75 326 aa11.61□□□□□ -0.55
PRKN-205ENST00000366897 OR8G5Q8NG78 346 aa11.61□□□□□ -0.55
PRKN-205ENST00000366897 CA5BP1Q8WTZ4 195 aa11.61□□□□□ -0.55
PRKN-205ENST00000366897 CACNG5Q9UF02 275 aa11.61□□□□□ -0.55
PRKN-205ENST00000366897 LAMP3Q9UQV4 416 aa11.61□□□□□ -0.55
PRKN-205ENST00000366897 OTOGLQ3ZCN5 2332 aa11.61□□□□□ -0.55
PRKN-205ENST00000366897 ELOA3CA0A087WX78 387 aaPredicted RBP11.6□□□□□ -0.55
PRKN-205ENST00000366897 ZNF816-ZNF321PA0A0X1KG74 233 aa11.6□□□□□ -0.55
PRKN-205ENST00000366897 ARGFXA6NJG6 315 aa11.6□□□□□ -0.55
PRKN-205ENST00000366897 VAMP5O95183 116 aa11.6□□□□□ -0.55
PRKN-205ENST00000366897 DEFA4P12838 97 aa11.6□□□□□ -0.55
PRKN-205ENST00000366897 PCOLCEQ15113 449 aa11.6□□□□□ -0.55
PRKN-205ENST00000366897 TESK1Q15569 626 aa11.6□□□□□ -0.55
PRKN-205ENST00000366897 CARFQ8N187 725 aa11.6□□□□□ -0.55
PRKN-205ENST00000366897 M1APQ8TC57 530 aa11.6□□□□□ -0.55
PRKN-205ENST00000366897 ABHD3Q8WU67 409 aa11.6□□□□□ -0.55
PRKN-205ENST00000366897 OR51B6Q9H340 312 aa11.6□□□□□ -0.55
PRKN-205ENST00000366897 SDF2L1Q9HCN8 221 aa11.6□□□□□ -0.55
PRKN-205ENST00000366897 IGHV5-10-1A0A0J9YXX1 117 aa11.6□□□□□ -0.55
PRKN-205ENST00000366897 CNOT4O95628 575 aaKnown RBP11.6□□□□□ -0.55
PRKN-205ENST00000366897 CYB5R3P00387 301 aaPredicted RBP11.6□□□□□ -0.55
PRKN-205ENST00000366897 AMBPP02760 352 aa11.6□□□□□ -0.55
PRKN-205ENST00000366897 HOXA6P31267 233 aa11.6□□□□□ -0.55
PRKN-205ENST00000366897 IL24Q13007 206 aa11.6□□□□□ -0.55
PRKN-205ENST00000366897 HAPLN4Q86UW8 402 aa11.6□□□□□ -0.55
PRKN-205ENST00000366897 SNIP1Q8TAD8 396 aaKnown RBP11.6□□□□□ -0.55
PRKN-205ENST00000366897 SCGB1C1Q8TD33 95 aa11.6□□□□□ -0.55
PRKN-205ENST00000366897 CCDC74BQ96LY2 380 aa11.6□□□□□ -0.55
PRKN-205ENST00000366897 OR14J1Q9UGF5 321 aa11.6□□□□□ -0.55
PRKN-205ENST00000366897 ADAMTS20P59510 1910 aa11.6□□□□□ -0.55
PRKN-205ENST00000366897 DNAJC13O75165 2243 aa11.6□□□□□ -0.55
PRKN-205ENST00000366897 IGHV3-64DA0A0J9YX35 117 aa11.59□□□□□ -0.55
PRKN-205ENST00000366897 SYNGR1O43759 233 aa11.59□□□□□ -0.55
PRKN-205ENST00000366897 SERPINE2P07093 398 aa11.59□□□□□ -0.55
PRKN-205ENST00000366897 BAXQ07812 192 aa11.59□□□□□ -0.55
PRKN-205ENST00000366897 FAM185AQ8N0U4 392 aa11.59□□□□□ -0.55
PRKN-205ENST00000366897 GATAD1Q8WUU5 269 aa11.59□□□□□ -0.55
PRKN-205ENST00000366897 ZNF845Q96IR2 970 aaPredicted RBP11.59□□□□□ -0.55
PRKN-205ENST00000366897 GPR87Q9BY21 358 aa11.59□□□□□ -0.55
PRKN-205ENST00000366897 MTCH1Q9NZJ7 389 aa11.59□□□□□ -0.55
PRKN-205ENST00000366897 ERRFI1Q9UJM3 462 aaPredicted RBP11.59□□□□□ -0.55
PRKN-205ENST00000366897 PTRH2Q9Y3E5 179 aaKnown RBP11.59□□□□□ -0.55
PRKN-205ENST00000366897 USF3Q68DE3 2245 aa11.59□□□□□ -0.55
PRKN-205ENST00000366897 C9J4A7 227 aa11.59□□□□□ -0.55
PRKN-205ENST00000366897 CST2P09228 141 aa11.59□□□□□ -0.55
PRKN-205ENST00000366897 RFPL3SP0C7P2 107 aa11.59□□□□□ -0.55
PRKN-205ENST00000366897 GZMBP10144 247 aa11.59□□□□□ -0.55
PRKN-205ENST00000366897 BMP5P22003 454 aa11.59□□□□□ -0.55
PRKN-205ENST00000366897 DSCR4P56555 118 aaPredicted RBP11.59□□□□□ -0.55
PRKN-205ENST00000366897 SMIM7Q9BQ49 75 aa11.59□□□□□ -0.55
PRKN-205ENST00000366897 PLSCR2Q9NRY7 297 aa11.59□□□□□ -0.55
PRKN-205ENST00000366897 OR1A1Q9P1Q5 309 aa11.59□□□□□ -0.55
PRKN-205ENST00000366897 C19orf25Q9UFG5 118 aaPredicted RBP11.59□□□□□ -0.55
PRKN-205ENST00000366897 PPP1R3CQ9UQK1 317 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms