RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 CD5P06127 495 aa6.21□□□□□ -1.42
CLCN3-202ENST00000360642 KCNJ3P48549 501 aa6.21□□□□□ -1.42
CLCN3-202ENST00000360642 FXYD4P59646 89 aa6.21□□□□□ -1.42
CLCN3-202ENST00000360642 BLOC1S1P78537 153 aa6.21□□□□□ -1.42
CLCN3-202ENST00000360642 ZNF124Q15973 351 aa6.21□□□□□ -1.42
CLCN3-202ENST00000360642 TUSC5Q8IXB3 177 aa6.21□□□□□ -1.42
CLCN3-202ENST00000360642 OR11L1Q8NGX0 322 aa6.21□□□□□ -1.42
CLCN3-202ENST00000360642 HPSE2Q8WWQ2 592 aa6.21□□□□□ -1.42
CLCN3-202ENST00000360642 ERGIC1Q969X5 290 aa6.21□□□□□ -1.42
CLCN3-202ENST00000360642 HES7Q9BYE0 225 aa6.21□□□□□ -1.42
CLCN3-202ENST00000360642 HRH4Q9H3N8 390 aa6.21□□□□□ -1.42
CLCN3-202ENST00000360642 RNF122Q9H9V4 155 aa6.21□□□□□ -1.42
CLCN3-202ENST00000360642 ZC4H2Q9NQZ6 224 aa6.21□□□□□ -1.42
CLCN3-202ENST00000360642 RCC2Q9P258 522 aaKnown RBP6.21□□□□□ -1.42
CLCN3-202ENST00000360642 NSG2Q9Y328 171 aa6.21□□□□□ -1.42
CLCN3-202ENST00000360642 LSM5Q9Y4Y9 91 aaKnown RBP6.21□□□□□ -1.42
CLCN3-202ENST00000360642 ZNF724A8MTY0 619 aa6.2□□□□□ -1.42
CLCN3-202ENST00000360642 FAM157AC9JC47 383 aa6.2□□□□□ -1.42
CLCN3-202ENST00000360642 PRSS44E7EML9 344 aa6.2□□□□□ -1.42
CLCN3-202ENST00000360642 MUC1P15941 1255 aaPredicted RBP6.2□□□□□ -1.42
CLCN3-202ENST00000360642 AADACP22760 399 aa6.2□□□□□ -1.42
CLCN3-202ENST00000360642 RFC3P40938 356 aa6.2□□□□□ -1.42
CLCN3-202ENST00000360642 FOXG1P55316 489 aaPredicted RBP6.2□□□□□ -1.42
CLCN3-202ENST00000360642 SUMO2P61956 95 aaKnown RBP6.2□□□□□ -1.42
CLCN3-202ENST00000360642 SRYQ05066 204 aa6.2□□□□□ -1.42
CLCN3-202ENST00000360642 PHLDA2Q53GA4 152 aa6.2□□□□□ -1.42
CLCN3-202ENST00000360642 DHRS7BQ6IAN0 325 aaPredicted RBP6.2□□□□□ -1.42
CLCN3-202ENST00000360642 SPAG16Q8N0X2 631 aa6.2□□□□□ -1.42
CLCN3-202ENST00000360642 OR56B2PQ8NGI1 322 aa6.2□□□□□ -1.42
CLCN3-202ENST00000360642 NRIP2Q9BQI9 281 aa6.2□□□□□ -1.42
CLCN3-202ENST00000360642 AIFM2Q9BRQ8 373 aa6.2□□□□□ -1.42
CLCN3-202ENST00000360642 GAGE10A6NGK3 116 aa6.2□□□□□ -1.42
CLCN3-202ENST00000360642 MED6O75586 246 aa6.2□□□□□ -1.42
CLCN3-202ENST00000360642 OR7C1O76099 320 aaPredicted RBP6.2□□□□□ -1.42
CLCN3-202ENST00000360642 NAPSAO96009 420 aa6.2□□□□□ -1.42
CLCN3-202ENST00000360642 PPYP01298 95 aa6.2□□□□□ -1.42
CLCN3-202ENST00000360642 BCL3P20749 454 aa6.2□□□□□ -1.42
CLCN3-202ENST00000360642 GNRHRP30968 328 aa6.2□□□□□ -1.42
CLCN3-202ENST00000360642 FGF12P61328 243 aa6.2□□□□□ -1.42
CLCN3-202ENST00000360642 PRDX4Q13162 271 aa6.2□□□□□ -1.42
CLCN3-202ENST00000360642 CEACAM21Q3KPI0 293 aa6.2□□□□□ -1.42
CLCN3-202ENST00000360642 Q6ZWC4 215 aa6.2□□□□□ -1.42
CLCN3-202ENST00000360642 LGI3Q8N145 548 aa6.2□□□□□ -1.42
CLCN3-202ENST00000360642 OR52M1Q8NGK5 317 aa6.2□□□□□ -1.42
CLCN3-202ENST00000360642 OR5L1Q8NGL2 311 aa6.2□□□□□ -1.42
CLCN3-202ENST00000360642 BSCL2Q96G97 398 aaPredicted RBP6.2□□□□□ -1.42
CLCN3-202ENST00000360642 TP53RKQ96S44 253 aa6.2□□□□□ -1.42
CLCN3-202ENST00000360642 ADAT1Q9BUB4 502 aaKnown RBP6.2□□□□□ -1.42
CLCN3-202ENST00000360642 ABHD14AQ9BUJ0 271 aa6.2□□□□□ -1.42
CLCN3-202ENST00000360642 TTTY12Q9BZ98 90 aa6.2□□□□□ -1.42
CLCN3-202ENST00000360642 TMEM231Q9H6L2 316 aa6.2□□□□□ -1.42
CLCN3-202ENST00000360642 ZNF442Q9H7R0 627 aa6.2□□□□□ -1.42
CLCN3-202ENST00000360642 ZFP57Q9NU63 452 aa6.2□□□□□ -1.42
CLCN3-202ENST00000360642 B4GALT7Q9UBV7 327 aa6.2□□□□□ -1.42
CLCN3-202ENST00000360642 TNRC6AQ8NDV7 1962 aaKnown RBP6.2□□□□□ -1.42
CLCN3-202ENST00000360642 C21orf140B9A014 251 aa6.2□□□□□ -1.42
CLCN3-202ENST00000360642 HLA-HP01893 362 aa6.2□□□□□ -1.42
CLCN3-202ENST00000360642 GLAP06280 429 aa6.2□□□□□ -1.42
CLCN3-202ENST00000360642 CCL2P13500 99 aa6.2□□□□□ -1.42
CLCN3-202ENST00000360642 DUSP1P28562 367 aa6.2□□□□□ -1.42
CLCN3-202ENST00000360642 MPLP40238 635 aa6.2□□□□□ -1.42
CLCN3-202ENST00000360642 MAGEA5P43359 124 aa6.2□□□□□ -1.42
CLCN3-202ENST00000360642 P2RY1P47900 373 aa6.2□□□□□ -1.42
CLCN3-202ENST00000360642 OR1C1Q15619 314 aa6.2□□□□□ -1.42
CLCN3-202ENST00000360642 SERTAD4-AS1Q5TG53 156 aa6.2□□□□□ -1.42
CLCN3-202ENST00000360642 GPR157Q5UAW9 335 aa6.2□□□□□ -1.42
CLCN3-202ENST00000360642 ABHD17BQ5VST6 288 aa6.2□□□□□ -1.42
CLCN3-202ENST00000360642 DMBX1Q8NFW5 382 aa6.2□□□□□ -1.42
CLCN3-202ENST00000360642 OR52L2PQ8NGH6 319 aa6.2□□□□□ -1.42
CLCN3-202ENST00000360642 OR4D5Q8NGN0 318 aa6.2□□□□□ -1.42
CLCN3-202ENST00000360642 GLMPQ8WWB7 406 aa6.2□□□□□ -1.42
CLCN3-202ENST00000360642 EXTL1Q92935 676 aa6.2□□□□□ -1.42
CLCN3-202ENST00000360642 APOBEC3DQ96AK3 386 aaPredicted RBP6.2□□□□□ -1.42
CLCN3-202ENST00000360642 PAPOLGQ9BWT3 736 aaKnown RBP6.2□□□□□ -1.42
CLCN3-202ENST00000360642 C11orf1Q9H5F2 150 aa6.2□□□□□ -1.42
CLCN3-202ENST00000360642 WFDC1Q9HC57 220 aa6.2□□□□□ -1.42
CLCN3-202ENST00000360642 Q9N2K0 584 aa6.2□□□□□ -1.42
CLCN3-202ENST00000360642 TREM1Q9NP99 234 aa6.2□□□□□ -1.42
CLCN3-202ENST00000360642 MTCH1Q9NZJ7 389 aa6.2□□□□□ -1.42
CLCN3-202ENST00000360642 FAM96BQ9Y3D0 163 aa6.2□□□□□ -1.42
CLCN3-202ENST00000360642 TMED3Q9Y3Q3 217 aa6.2□□□□□ -1.42
CLCN3-202ENST00000360642 NBEAQ8NFP9 2946 aa6.19□□□□□ -1.42
CLCN3-202ENST00000360642 C5orf49A4QMS7 147 aa6.19□□□□□ -1.42
CLCN3-202ENST00000360642 RNASEK-C17orf49H0YIS7 233 aa6.19□□□□□ -1.42
CLCN3-202ENST00000360642 MPPED1O15442 326 aa6.19□□□□□ -1.42
CLCN3-202ENST00000360642 GPR137BO60478 399 aa6.19□□□□□ -1.42
CLCN3-202ENST00000360642 SNAPINO95295 136 aa6.19□□□□□ -1.42
CLCN3-202ENST00000360642 GLP1RP43220 463 aa6.19□□□□□ -1.42
CLCN3-202ENST00000360642 HAAOP46952 286 aa6.19□□□□□ -1.42
CLCN3-202ENST00000360642 UCP2P55851 309 aa6.19□□□□□ -1.42
CLCN3-202ENST00000360642 DCAF10Q5QP82 559 aa6.19□□□□□ -1.42
CLCN3-202ENST00000360642 C5orf24Q7Z6I8 188 aa6.19□□□□□ -1.42
CLCN3-202ENST00000360642 CCDC71LQ8N9Z2 235 aa6.19□□□□□ -1.42
CLCN3-202ENST00000360642 SLAMF9Q96A28 289 aa6.19□□□□□ -1.42
CLCN3-202ENST00000360642 POM121L2Q96KW2 1035 aa6.19□□□□□ -1.42
CLCN3-202ENST00000360642 GINS3Q9BRX5 216 aa6.19□□□□□ -1.42
CLCN3-202ENST00000360642 ARRDC1-AS1Q9H2J1 176 aa6.19□□□□□ -1.42
CLCN3-202ENST00000360642 CALHM2Q9HA72 323 aa6.19□□□□□ -1.42
CLCN3-202ENST00000360642 SHANK1Q9Y566 2161 aa6.19□□□□□ -1.42
CLCN3-202ENST00000360642 C3orf85A0A1B0GTC6 90 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms