RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 NDUFA2O43678 99 aa8.52□□□□□ -1.05
CUX1-203ENST00000360264 LRRC75BQ2VPJ9 315 aa8.52□□□□□ -1.05
CUX1-203ENST00000360264 IFT22Q9H7X7 185 aa8.52□□□□□ -1.05
CUX1-203ENST00000360264 WNT9BO14905 357 aa8.52□□□□□ -1.05
CUX1-203ENST00000360264 MEOX2P50222 304 aa8.52□□□□□ -1.05
CUX1-203ENST00000360264 TRBV23-1A0A0A0MS06 115 aa8.52□□□□□ -1.05
CUX1-203ENST00000360264 S1PR2O95136 353 aa8.52□□□□□ -1.05
CUX1-203ENST00000360264 FGF8P55075 233 aaPredicted RBP8.52□□□□□ -1.05
CUX1-203ENST00000360264 ERASQ7Z444 233 aa8.52□□□□□ -1.05
CUX1-203ENST00000360264 CXCL16Q9H2A7 254 aa8.52□□□□□ -1.05
CUX1-203ENST00000360264 CTSVO60911 334 aa8.52□□□□□ -1.05
CUX1-203ENST00000360264 CDS2O95674 445 aa8.52□□□□□ -1.05
CUX1-203ENST00000360264 TIAL1Q01085 375 aaKnown RBP eCLIP8.52□□□□□ -1.05
CUX1-203ENST00000360264 ITGBL1O95965 494 aaPredicted RBP8.52□□□□□ -1.05
CUX1-203ENST00000360264 C10orf113Q5VZT2 155 aa8.52□□□□□ -1.05
CUX1-203ENST00000360264 SPINK14Q6IE38 97 aa8.52□□□□□ -1.05
CUX1-203ENST00000360264 SLC23A3Q6PIS1 610 aa8.52□□□□□ -1.05
CUX1-203ENST00000360264 OR4X1Q8NH49 305 aa8.52□□□□□ -1.05
CUX1-203ENST00000360264 VSTM2LQ96N03 204 aa8.52□□□□□ -1.05
CUX1-203ENST00000360264 RABAC1Q9UI14 185 aa8.52□□□□□ -1.05
CUX1-203ENST00000360264 TAS2R60P59551 318 aa8.52□□□□□ -1.05
CUX1-203ENST00000360264 B2MP61769 119 aa8.52□□□□□ -1.05
CUX1-203ENST00000360264 LOXL4Q96JB6 756 aa8.52□□□□□ -1.05
CUX1-203ENST00000360264 ABHD14AQ9BUJ0 271 aa8.52□□□□□ -1.05
CUX1-203ENST00000360264 RNF7Q9UBF6 113 aa8.52□□□□□ -1.05
CUX1-203ENST00000360264 ING1Q9UK53 422 aaPredicted RBP8.52□□□□□ -1.05
CUX1-203ENST00000360264 RPL31P62899 125 aaKnown RBP8.52□□□□□ -1.05
CUX1-203ENST00000360264 ABLIM2Q6H8Q1 611 aa8.52□□□□□ -1.05
CUX1-203ENST00000360264 OR2W1Q9Y3N9 320 aa8.52□□□□□ -1.05
CUX1-203ENST00000360264 FXYD1O00168 92 aa8.51□□□□□ -1.05
CUX1-203ENST00000360264 MMDQ15546 238 aa8.51□□□□□ -1.05
CUX1-203ENST00000360264 IL19Q9UHD0 177 aa8.51□□□□□ -1.05
CUX1-203ENST00000360264 PITPNC1Q9UKF7 332 aa8.51□□□□□ -1.05
CUX1-203ENST00000360264 TRAV30A0A087WSZ9 112 aa8.51□□□□□ -1.05
CUX1-203ENST00000360264 CDKN2AP42771 156 aaKnown RBP8.51□□□□□ -1.05
CUX1-203ENST00000360264 TNFSF10P50591 281 aa8.51□□□□□ -1.05
CUX1-203ENST00000360264 CLEC12BQ2HXU8 276 aa8.51□□□□□ -1.05
CUX1-203ENST00000360264 MARS2Q96GW9 593 aaKnown RBP8.51□□□□□ -1.05
CUX1-203ENST00000360264 A0A1W2PR80 420 aa8.51□□□□□ -1.05
CUX1-203ENST00000360264 BRCA1P38398 1863 aaKnown RBP8.51□□□□□ -1.05
CUX1-203ENST00000360264 MMP9P14780 707 aa8.51□□□□□ -1.05
CUX1-203ENST00000360264 CLEC18BQ6UXF7 455 aa8.51□□□□□ -1.05
CUX1-203ENST00000360264 LRP11Q86VZ4 500 aa8.51□□□□□ -1.05
CUX1-203ENST00000360264 D2HGDHQ8N465 521 aa8.51□□□□□ -1.05
CUX1-203ENST00000360264 OR8A1Q8NGG7 326 aa8.51□□□□□ -1.05
CUX1-203ENST00000360264 PIMREGQ9BSJ6 248 aa8.51□□□□□ -1.05
CUX1-203ENST00000360264 ZFP30Q9Y2G7 519 aa8.51□□□□□ -1.05
CUX1-203ENST00000360264 QSER1Q2KHR3 1735 aa8.51□□□□□ -1.05
CUX1-203ENST00000360264 H3BMH7 237 aa8.51□□□□□ -1.05
CUX1-203ENST00000360264 HPXP02790 462 aa8.51□□□□□ -1.05
CUX1-203ENST00000360264 CD1BP29016 333 aa8.51□□□□□ -1.05
CUX1-203ENST00000360264 SLC37A1P57057 533 aa8.51□□□□□ -1.05
CUX1-203ENST00000360264 ROM1Q03395 351 aa8.51□□□□□ -1.05
CUX1-203ENST00000360264 COTL1Q14019 142 aa8.51□□□□□ -1.05
CUX1-203ENST00000360264 ELOVL1Q9BW60 279 aa8.51□□□□□ -1.05
CUX1-203ENST00000360264 TRPM3Q9HCF6 1732 aaPredicted RBP8.51□□□□□ -1.05
CUX1-203ENST00000360264 PPM1DO15297 605 aa8.51□□□□□ -1.05
CUX1-203ENST00000360264 SCGB1A1P11684 91 aa8.51□□□□□ -1.05
CUX1-203ENST00000360264 ACAA2P42765 397 aaKnown RBP8.51□□□□□ -1.05
CUX1-203ENST00000360264 SERF2P84101 59 aa8.51□□□□□ -1.05
CUX1-203ENST00000360264 PRSS36Q5K4E3 855 aa8.51□□□□□ -1.05
CUX1-203ENST00000360264 CDRT15L2A8MXV6 281 aa8.51□□□□□ -1.05
CUX1-203ENST00000360264 CFDP00746 253 aaPredicted RBP8.51□□□□□ -1.05
CUX1-203ENST00000360264 GEMIN2O14893 280 aaKnown RBP8.51□□□□□ -1.05
CUX1-203ENST00000360264 CLEC2AQ6UVW9 174 aa8.51□□□□□ -1.05
CUX1-203ENST00000360264 OR5AU1Q8NGC0 362 aa8.51□□□□□ -1.05
CUX1-203ENST00000360264 RBFOX3A6NFN3 312 aa8.51□□□□□ -1.05
CUX1-203ENST00000360264 CRYBB2P43320 205 aa8.51□□□□□ -1.05
CUX1-203ENST00000360264 CAMPP49913 170 aa8.51□□□□□ -1.05
CUX1-203ENST00000360264 RNF167Q9H6Y7 350 aa8.51□□□□□ -1.05
CUX1-203ENST00000360264 HOXB1P14653 301 aaPredicted RBP8.51□□□□□ -1.05
CUX1-203ENST00000360264 HIST3H3Q16695 136 aa8.51□□□□□ -1.05
CUX1-203ENST00000360264 ISXQ2M1V0 245 aa8.51□□□□□ -1.05
CUX1-203ENST00000360264 GAB4Q2WGN9 574 aa8.51□□□□□ -1.05
CUX1-203ENST00000360264 FAM222BQ8WU58 562 aa8.51□□□□□ -1.05
CUX1-203ENST00000360264 FGF11Q92914 225 aa8.51□□□□□ -1.05
CUX1-203ENST00000360264 TNFRSF19Q9NS68 423 aa8.51□□□□□ -1.05
CUX1-203ENST00000360264 K7N7A8 449 aa8.51□□□□□ -1.05
CUX1-203ENST00000360264 APCSP02743 223 aa8.51□□□□□ -1.05
CUX1-203ENST00000360264 ADIPOQQ15848 244 aa8.51□□□□□ -1.05
CUX1-203ENST00000360264 FAM78BQ5VT40 261 aa8.51□□□□□ -1.05
CUX1-203ENST00000360264 SLC35E4Q6ICL7 350 aa8.51□□□□□ -1.05
CUX1-203ENST00000360264 SSMEM1Q8WWF3 244 aa8.51□□□□□ -1.05
CUX1-203ENST00000360264 PITX3O75364 302 aa8.5□□□□□ -1.05
CUX1-203ENST00000360264 C12orf57Q99622 126 aa8.5□□□□□ -1.05
CUX1-203ENST00000360264 PCOLCE2Q9UKZ9 415 aa8.5□□□□□ -1.05
CUX1-203ENST00000360264 ATG4DQ86TL0 474 aaPredicted RBP8.5□□□□□ -1.05
CUX1-203ENST00000360264 EID2BQ96D98 161 aa8.5□□□□□ -1.05
CUX1-203ENST00000360264 H3BP45 60 aa8.5□□□□□ -1.05
CUX1-203ENST00000360264 MELTFP08582 738 aa8.5□□□□□ -1.05
CUX1-203ENST00000360264 CISD3P0C7P0 127 aa8.5□□□□□ -1.05
CUX1-203ENST00000360264 CTLA4P16410 223 aa8.5□□□□□ -1.05
CUX1-203ENST00000360264 CEBPDP49716 269 aaPredicted RBP8.5□□□□□ -1.05
CUX1-203ENST00000360264 FMODQ06828 376 aa8.5□□□□□ -1.05
CUX1-203ENST00000360264 OR2V2Q96R30 315 aa8.5□□□□□ -1.05
CUX1-203ENST00000360264 DOK5Q9P104 306 aa8.5□□□□□ -1.05
CUX1-203ENST00000360264 IGHV3-43A0A0B4J1X8 118 aa8.5□□□□□ -1.05
CUX1-203ENST00000360264 IGHV3-43DP0DP04 118 aa8.5□□□□□ -1.05
CUX1-203ENST00000360264 RAE1P78406 368 aaKnown RBP8.5□□□□□ -1.05
CUX1-203ENST00000360264 SIGLEC14Q08ET2 396 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms