RNA–Protein interactions for RNA: ENST00000338963.6

NEDD4-201, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-201ENST00000338963 TAAR3PQ9P1P4 343 aa3.6□□□□□ -1.83
NEDD4-201ENST00000338963 HS3ST4Q9Y661 456 aa3.6□□□□□ -1.83
NEDD4-201ENST00000338963 ANKRD36CQ5JPF3 1778 aa3.6□□□□□ -1.83
NEDD4-201ENST00000338963 CASTOR2A6NHX0 329 aa3.6□□□□□ -1.83
NEDD4-201ENST00000338963 MLNRO43193 412 aa3.6□□□□□ -1.83
NEDD4-201ENST00000338963 DHHO43323 396 aa3.6□□□□□ -1.83
NEDD4-201ENST00000338963 DUX1O43812 170 aa3.6□□□□□ -1.83
NEDD4-201ENST00000338963 SAP30O75446 220 aa3.6□□□□□ -1.83
NEDD4-201ENST00000338963 EVI2AP22794 236 aa3.6□□□□□ -1.83
NEDD4-201ENST00000338963 UQCRFS1P47985 274 aa3.6□□□□□ -1.83
NEDD4-201ENST00000338963 ZNF133P52736 654 aaPredicted RBP3.6□□□□□ -1.83
NEDD4-201ENST00000338963 SQSTM1Q13501 440 aa3.6□□□□□ -1.83
NEDD4-201ENST00000338963 TBR1Q16650 682 aa3.6□□□□□ -1.83
NEDD4-201ENST00000338963 LCN10Q6JVE6 187 aa3.6□□□□□ -1.83
NEDD4-201ENST00000338963 C1orf210Q8IVY1 113 aa3.6□□□□□ -1.83
NEDD4-201ENST00000338963 TMEM256Q8N2U0 113 aa3.6□□□□□ -1.83
NEDD4-201ENST00000338963 DNAJC30Q96LL9 226 aa3.6□□□□□ -1.83
NEDD4-201ENST00000338963 DUX5Q96PT3 197 aa3.6□□□□□ -1.83
NEDD4-201ENST00000338963 IL36BQ9NZH7 164 aa3.6□□□□□ -1.83
NEDD4-201ENST00000338963 MDKP21741 143 aaPredicted RBP3.59□□□□□ -1.83
NEDD4-201ENST00000338963 FBLP22087 321 aaKnown RBP3.59□□□□□ -1.83
NEDD4-201ENST00000338963 OR1D5P58170 312 aa3.59□□□□□ -1.83
NEDD4-201ENST00000338963 SP4Q02446 784 aa3.59□□□□□ -1.83
NEDD4-201ENST00000338963 TTC32Q5I0X7 151 aa3.59□□□□□ -1.83
NEDD4-201ENST00000338963 ADAD2Q8NCV1 583 aaKnown RBP3.59□□□□□ -1.83
NEDD4-201ENST00000338963 OR52E2Q8NGJ4 325 aa3.59□□□□□ -1.83
NEDD4-201ENST00000338963 FGF13Q92913 245 aa3.59□□□□□ -1.83
NEDD4-201ENST00000338963 PHF7Q9BWX1 381 aaPredicted RBP3.59□□□□□ -1.83
NEDD4-201ENST00000338963 C5orf66Q9H5L9 145 aa3.59□□□□□ -1.83
NEDD4-201ENST00000338963 PPIAL4AQ9Y536 164 aa3.59□□□□□ -1.83
NEDD4-201ENST00000338963 INSL5Q9Y5Q6 135 aa3.59□□□□□ -1.83
NEDD4-201ENST00000338963 ATP23Q9Y6H3 246 aa3.59□□□□□ -1.83
NEDD4-201ENST00000338963 MYH1P12882 1939 aa3.59□□□□□ -1.83
NEDD4-201ENST00000338963 ZNF878C9JN71 531 aa3.59□□□□□ -1.83
NEDD4-201ENST00000338963 IFNL4K9M1U5 179 aa3.59□□□□□ -1.83
NEDD4-201ENST00000338963 SAP18O00422 153 aaKnown RBP3.59□□□□□ -1.83
NEDD4-201ENST00000338963 XRCC2O43543 280 aa3.59□□□□□ -1.83
NEDD4-201ENST00000338963 ADMP35318 185 aa3.59□□□□□ -1.83
NEDD4-201ENST00000338963 HERV-K104P61576 105 aa3.59□□□□□ -1.83
NEDD4-201ENST00000338963 TM4SF20Q53R12 229 aa3.59□□□□□ -1.83
NEDD4-201ENST00000338963 ZNF550Q7Z398 422 aa3.59□□□□□ -1.83
NEDD4-201ENST00000338963 TMEM45BQ96B21 275 aa3.59□□□□□ -1.83
NEDD4-201ENST00000338963 C10orf35Q96D05 121 aa3.59□□□□□ -1.83
NEDD4-201ENST00000338963 HES4Q9HCC6 221 aa3.59□□□□□ -1.83
NEDD4-201ENST00000338963 NECAP2Q9NVZ3 263 aa3.59□□□□□ -1.83
NEDD4-201ENST00000338963 ABT1Q9ULW3 272 aaKnown RBP3.59□□□□□ -1.83
NEDD4-201ENST00000338963 ARL2-SNX15V9GYD0 113 aa3.59□□□□□ -1.83
NEDD4-201ENST00000338963 AHDC1Q5TGY3 1603 aaPredicted RBP3.59□□□□□ -1.83
NEDD4-201ENST00000338963 C2orf72A6NCS6 295 aa3.59□□□□□ -1.83
NEDD4-201ENST00000338963 CER1O95813 267 aa3.59□□□□□ -1.83
NEDD4-201ENST00000338963 NUDT14O95848 222 aa3.59□□□□□ -1.83
NEDD4-201ENST00000338963 CA2P00918 260 aa3.59□□□□□ -1.83
NEDD4-201ENST00000338963 ZNF17P17021 662 aa3.59□□□□□ -1.83
NEDD4-201ENST00000338963 RHOAP61586 193 aa3.59□□□□□ -1.83
NEDD4-201ENST00000338963 SRSF7Q16629 238 aaKnown RBP eCLIP3.59□□□□□ -1.83
NEDD4-201ENST00000338963 CPEB2Q7Z5Q1 589 aaKnown RBP3.59□□□□□ -1.83
NEDD4-201ENST00000338963 PPP1R27Q86WC6 154 aa3.59□□□□□ -1.83
NEDD4-201ENST00000338963 OR6K6Q8NGW6 343 aa3.59□□□□□ -1.83
NEDD4-201ENST00000338963 OR1L1Q8NH94 360 aa3.59□□□□□ -1.83
NEDD4-201ENST00000338963 ORAI2Q96SN7 254 aa3.59□□□□□ -1.83
NEDD4-201ENST00000338963 SAP30LQ9HAJ7 183 aa3.59□□□□□ -1.83
NEDD4-201ENST00000338963 ELOVL3Q9HB03 270 aa3.59□□□□□ -1.83
NEDD4-201ENST00000338963 NPVFQ9HCQ7 196 aa3.59□□□□□ -1.83
NEDD4-201ENST00000338963 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP3.59□□□□□ -1.84
NEDD4-201ENST00000338963 OR4C46A6NHA9 309 aa3.59□□□□□ -1.84
NEDD4-201ENST00000338963 ANKRD66B4E2M5 251 aa3.59□□□□□ -1.84
NEDD4-201ENST00000338963 CSRP1P21291 193 aaKnown RBP3.59□□□□□ -1.84
NEDD4-201ENST00000338963 NCBP2P52298 156 aaKnown RBP eCLIP3.59□□□□□ -1.84
NEDD4-201ENST00000338963 RAE1P78406 368 aaKnown RBP3.59□□□□□ -1.84
NEDD4-201ENST00000338963 CCL20P78556 96 aa3.59□□□□□ -1.84
NEDD4-201ENST00000338963 TGFBR3Q03167 851 aa3.59□□□□□ -1.84
NEDD4-201ENST00000338963 OR8B8Q15620 311 aa3.59□□□□□ -1.84
NEDD4-201ENST00000338963 WDR5BQ86VZ2 330 aa3.59□□□□□ -1.84
NEDD4-201ENST00000338963 ZNF695Q8IW36 515 aa3.59□□□□□ -1.84
NEDD4-201ENST00000338963 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.59□□□□□ -1.84
NEDD4-201ENST00000338963 OR8B3Q8NGG8 313 aa3.59□□□□□ -1.84
NEDD4-201ENST00000338963 OR5D14Q8NGL3 314 aa3.59□□□□□ -1.84
NEDD4-201ENST00000338963 OR8B2Q96RD0 313 aa3.59□□□□□ -1.84
NEDD4-201ENST00000338963 SFXN3Q9BWM7 321 aa3.59□□□□□ -1.84
NEDD4-201ENST00000338963 ZNF443Q9Y2A4 671 aaPredicted RBP3.59□□□□□ -1.84
NEDD4-201ENST00000338963 KBTBD11-OT1A0A1B0GTJ5 212 aa3.59□□□□□ -1.84
NEDD4-201ENST00000338963 ZC3H12DA2A288 527 aaKnown RBP3.59□□□□□ -1.84
NEDD4-201ENST00000338963 SDCBPO00560 298 aaPredicted RBP3.59□□□□□ -1.84
NEDD4-201ENST00000338963 ERI3O43414 337 aaKnown RBP3.59□□□□□ -1.84
NEDD4-201ENST00000338963 IGHG3P01860 377 aa3.59□□□□□ -1.84
NEDD4-201ENST00000338963 GNB2P62879 340 aa3.59□□□□□ -1.84
NEDD4-201ENST00000338963 PEAR1Q5VY43 1037 aaPredicted RBP3.59□□□□□ -1.84
NEDD4-201ENST00000338963 LHFPL1Q86WI0 220 aa3.59□□□□□ -1.84
NEDD4-201ENST00000338963 OR10G6Q8NH81 332 aa3.59□□□□□ -1.84
NEDD4-201ENST00000338963 ENY2Q9NPA8 101 aa3.59□□□□□ -1.84
NEDD4-201ENST00000338963 PLA2G3Q9NZ20 509 aa3.59□□□□□ -1.84
NEDD4-201ENST00000338963 DLEC1Q9Y238 1755 aa3.59□□□□□ -1.84
NEDD4-201ENST00000338963 MYH6P13533 1939 aa3.58□□□□□ -1.84
NEDD4-201ENST00000338963 MYH2Q9UKX2 1941 aa3.58□□□□□ -1.84
NEDD4-201ENST00000338963 A0A1W2PPM0 123 aa3.58□□□□□ -1.84
NEDD4-201ENST00000338963 DHRS3O75911 302 aa3.58□□□□□ -1.84
NEDD4-201ENST00000338963 OR7C1O76099 320 aaPredicted RBP3.58□□□□□ -1.84
NEDD4-201ENST00000338963 AREGP15514 252 aa3.58□□□□□ -1.84
NEDD4-201ENST00000338963 DUSP28Q4G0W2 176 aa3.58□□□□□ -1.84
NEDD4-201ENST00000338963 ZNF658BQ4V348 819 aaPredicted RBP3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms