RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 NFYBP25208 207 aa11.52□□□□□ -0.57
APOBEC3B-202ENST00000335760 S100A5P33763 92 aa11.52□□□□□ -0.57
APOBEC3B-202ENST00000335760 SRP14P37108 136 aaKnown RBP11.52□□□□□ -0.57
APOBEC3B-202ENST00000335760 HMGN3Q15651 99 aa11.52□□□□□ -0.57
APOBEC3B-202ENST00000335760 GPR157Q5UAW9 335 aa11.52□□□□□ -0.57
APOBEC3B-202ENST00000335760 NCR3LG1Q68D85 454 aa11.52□□□□□ -0.57
APOBEC3B-202ENST00000335760 BAIAP2L2Q6UXY1 529 aa11.52□□□□□ -0.57
APOBEC3B-202ENST00000335760 ZNF554Q86TJ5 538 aa11.52□□□□□ -0.57
APOBEC3B-202ENST00000335760 SNX29P2Q8IUI4 249 aa11.52□□□□□ -0.57
APOBEC3B-202ENST00000335760 PNKDQ8N490 385 aa11.52□□□□□ -0.57
APOBEC3B-202ENST00000335760 TEX29Q8N6K0 151 aa11.52□□□□□ -0.57
APOBEC3B-202ENST00000335760 MAFIPQ8WZ33 124 aa11.52□□□□□ -0.57
APOBEC3B-202ENST00000335760 TNFRSF14Q92956 283 aa11.52□□□□□ -0.57
APOBEC3B-202ENST00000335760 HEXA-AS1Q9H8Q6 139 aa11.52□□□□□ -0.57
APOBEC3B-202ENST00000335760 RAB9BQ9NP90 201 aa11.52□□□□□ -0.57
APOBEC3B-202ENST00000335760 MGAT4AQ9UM21 535 aa11.52□□□□□ -0.57
APOBEC3B-202ENST00000335760 A0A1W2PRD5 423 aa11.51□□□□□ -0.57
APOBEC3B-202ENST00000335760 A0A1W2PRF3 423 aa11.51□□□□□ -0.57
APOBEC3B-202ENST00000335760 A0A1W2PRM7 423 aa11.51□□□□□ -0.57
APOBEC3B-202ENST00000335760 FAM172BPA6NC97 362 aa11.51□□□□□ -0.57
APOBEC3B-202ENST00000335760 IGHV4-38-2P0DP08 117 aa11.51□□□□□ -0.57
APOBEC3B-202ENST00000335760 FPR2P25090 351 aa11.51□□□□□ -0.57
APOBEC3B-202ENST00000335760 TNFSF8P32971 234 aa11.51□□□□□ -0.57
APOBEC3B-202ENST00000335760 PRSS3P35030 304 aa11.51□□□□□ -0.57
APOBEC3B-202ENST00000335760 HLA-DRB3P79483 266 aa11.51□□□□□ -0.57
APOBEC3B-202ENST00000335760 GUCA2AQ02747 115 aa11.51□□□□□ -0.57
APOBEC3B-202ENST00000335760 OR52W1Q6IF63 320 aa11.51□□□□□ -0.57
APOBEC3B-202ENST00000335760 HCP5Q6MZN7 132 aa11.51□□□□□ -0.57
APOBEC3B-202ENST00000335760 OR10A7Q8NGE5 316 aa11.51□□□□□ -0.57
APOBEC3B-202ENST00000335760 OR13D1Q8NGV5 346 aa11.51□□□□□ -0.57
APOBEC3B-202ENST00000335760 GCDHQ92947 438 aaPredicted RBP11.51□□□□□ -0.57
APOBEC3B-202ENST00000335760 KIRREL1Q96J84 757 aa11.51□□□□□ -0.57
APOBEC3B-202ENST00000335760 ST6GALNAC5Q9BVH7 336 aa11.51□□□□□ -0.57
APOBEC3B-202ENST00000335760 BEX2Q9BXY8 128 aa11.51□□□□□ -0.57
APOBEC3B-202ENST00000335760 TMEM133Q9H2Q1 129 aa11.51□□□□□ -0.57
APOBEC3B-202ENST00000335760 CDC42EP3Q9UKI2 254 aa11.51□□□□□ -0.57
APOBEC3B-202ENST00000335760 IGHV1-69DA0A0B4J2H0 117 aa11.5□□□□□ -0.57
APOBEC3B-202ENST00000335760 MEIS3P1A6NDR6 274 aa11.5□□□□□ -0.57
APOBEC3B-202ENST00000335760 TRDCB7Z8K6 153 aa11.5□□□□□ -0.57
APOBEC3B-202ENST00000335760 F2RL2O00254 374 aa11.5□□□□□ -0.57
APOBEC3B-202ENST00000335760 SDCBPO00560 298 aaPredicted RBP11.5□□□□□ -0.57
APOBEC3B-202ENST00000335760 FSHBP01225 129 aa11.5□□□□□ -0.57
APOBEC3B-202ENST00000335760 IGHV1-69P01742 117 aa11.5□□□□□ -0.57
APOBEC3B-202ENST00000335760 SCTP09683 121 aa11.5□□□□□ -0.57
APOBEC3B-202ENST00000335760 IL1F10Q8WWZ1 152 aa11.5□□□□□ -0.57
APOBEC3B-202ENST00000335760 LEAP2Q969E1 77 aa11.5□□□□□ -0.57
APOBEC3B-202ENST00000335760 NUP50Q9UKX7 468 aa11.5□□□□□ -0.57
APOBEC3B-202ENST00000335760 TLN2Q9Y4G6 2542 aa11.5□□□□□ -0.57
APOBEC3B-202ENST00000335760 IGHV3-43A0A0B4J1X8 118 aa11.49□□□□□ -0.57
APOBEC3B-202ENST00000335760 MEIOCA2RUB1 952 aa11.49□□□□□ -0.57
APOBEC3B-202ENST00000335760 TPPPO94811 219 aa11.49□□□□□ -0.57
APOBEC3B-202ENST00000335760 IGHV3-43DP0DP04 118 aa11.49□□□□□ -0.57
APOBEC3B-202ENST00000335760 KIR2DS4P43632 304 aa11.49□□□□□ -0.57
APOBEC3B-202ENST00000335760 CBX5P45973 191 aa11.49□□□□□ -0.57
APOBEC3B-202ENST00000335760 UBE2E1P51965 193 aa11.49□□□□□ -0.57
APOBEC3B-202ENST00000335760 KIR2DS1Q14954 304 aa11.49□□□□□ -0.57
APOBEC3B-202ENST00000335760 SRSF7Q16629 238 aaKnown RBP eCLIP11.49□□□□□ -0.57
APOBEC3B-202ENST00000335760 UTF1Q5T230 341 aa11.49□□□□□ -0.57
APOBEC3B-202ENST00000335760 RUSC1-AS1Q66K80 236 aa11.49□□□□□ -0.57
APOBEC3B-202ENST00000335760 FAM53AQ6NSI3 398 aaPredicted RBP11.49□□□□□ -0.57
APOBEC3B-202ENST00000335760 BRD3OSQ6XYD6 125 aa11.49□□□□□ -0.57
APOBEC3B-202ENST00000335760 ABHD12Q8N2K0 398 aa11.49□□□□□ -0.57
APOBEC3B-202ENST00000335760 OR52L2PQ8NGH6 319 aa11.49□□□□□ -0.57
APOBEC3B-202ENST00000335760 OR6Q1Q8NGQ2 317 aa11.49□□□□□ -0.57
APOBEC3B-202ENST00000335760 GALMQ96C23 342 aa11.49□□□□□ -0.57
APOBEC3B-202ENST00000335760 OCSTAMPQ9BR26 566 aa11.49□□□□□ -0.57
APOBEC3B-202ENST00000335760 CLEC7AQ9BXN2 247 aa11.49□□□□□ -0.57
APOBEC3B-202ENST00000335760 ZNF286AQ9HBT8 521 aa11.49□□□□□ -0.57
APOBEC3B-202ENST00000335760 GNG12Q9UBI6 72 aa11.49□□□□□ -0.57
APOBEC3B-202ENST00000335760 IGKV1D-8A0A087WSZ0 117 aa11.48□□□□□ -0.57
APOBEC3B-202ENST00000335760 A0A087X0M5 115 aa11.48□□□□□ -0.57
APOBEC3B-202ENST00000335760 IGHV2-26A0A0B4J1V2 119 aa11.48□□□□□ -0.57
APOBEC3B-202ENST00000335760 A0A1B0GX30 115 aa11.48□□□□□ -0.57
APOBEC3B-202ENST00000335760 FABP12A6NFH5 140 aa11.48□□□□□ -0.57
APOBEC3B-202ENST00000335760 NPFFO15130 113 aa11.48□□□□□ -0.57
APOBEC3B-202ENST00000335760 FABP7O15540 132 aa11.48□□□□□ -0.57
APOBEC3B-202ENST00000335760 IGHV3-7P01780 117 aa11.48□□□□□ -0.57
APOBEC3B-202ENST00000335760 FCER2P06734 321 aa11.48□□□□□ -0.57
APOBEC3B-202ENST00000335760 GSTT2P0CG29 244 aa11.48□□□□□ -0.57
APOBEC3B-202ENST00000335760 GSTT2BP0CG30 244 aa11.48□□□□□ -0.57
APOBEC3B-202ENST00000335760 LOXL3P58215 753 aa11.48□□□□□ -0.57
APOBEC3B-202ENST00000335760 HTD2P86397 168 aa11.48□□□□□ -0.57
APOBEC3B-202ENST00000335760 IL18Q14116 193 aa11.48□□□□□ -0.57
APOBEC3B-202ENST00000335760 TMEM30BQ3MIR4 351 aa11.48□□□□□ -0.57
APOBEC3B-202ENST00000335760 CHRFAM7AQ494W8 412 aa11.48□□□□□ -0.57
APOBEC3B-202ENST00000335760 RNASE12Q5GAN4 147 aaKnown RBP11.48□□□□□ -0.57
APOBEC3B-202ENST00000335760 Q6ZS49 121 aa11.48□□□□□ -0.57
APOBEC3B-202ENST00000335760 HOGA1Q86XE5 327 aa11.48□□□□□ -0.57
APOBEC3B-202ENST00000335760 GVQW1Q8N7I0 195 aa11.48□□□□□ -0.57
APOBEC3B-202ENST00000335760 OR10V1Q8NGI7 309 aa11.48□□□□□ -0.57
APOBEC3B-202ENST00000335760 OR52M1Q8NGK5 317 aa11.48□□□□□ -0.57
APOBEC3B-202ENST00000335760 OR4A4PQ8NGN8 299 aa11.48□□□□□ -0.57
APOBEC3B-202ENST00000335760 C15orf40Q8WUR7 153 aa11.48□□□□□ -0.57
APOBEC3B-202ENST00000335760 ABHD1Q96SE0 405 aa11.48□□□□□ -0.57
APOBEC3B-202ENST00000335760 MS4A7Q9GZW8 240 aaPredicted RBP11.48□□□□□ -0.57
APOBEC3B-202ENST00000335760 IFT46Q9NQC8 304 aa11.48□□□□□ -0.57
APOBEC3B-202ENST00000335760 OR2S2Q9NQN1 319 aa11.48□□□□□ -0.57
APOBEC3B-202ENST00000335760 GFOD1Q9NXC2 390 aa11.48□□□□□ -0.57
APOBEC3B-202ENST00000335760 ZNF69Q9UC07 566 aa11.48□□□□□ -0.57
APOBEC3B-202ENST00000335760 HIVEP2P31629 2446 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms