RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 PXT1Q8NFP0 134 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 OR1M1Q8NGA1 313 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 OR10J6PQ8NGY7 276 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 TSKUQ8WUA8 353 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 TWIST2Q8WVJ9 160 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 UBLCP1Q8WVY7 318 aaPredicted RBP1.06□□□□□ -2.24
LINC00643-201ENST00000334389 ASB17Q8WXJ9 295 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 FAM46BQ96A09 425 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 SLCO4A1Q96BD0 722 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 NXNL1Q96CM4 212 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 SLC7A6OSQ96CW6 309 aaPredicted RBP1.06□□□□□ -2.24
LINC00643-201ENST00000334389 FAHD2AQ96GK7 314 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 SLC35G5Q96KT7 338 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 S1PR3Q99500 378 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 DUSP26Q9BV47 211 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 INTS9Q9NV88 658 aaKnown RBP1.06□□□□□ -2.24
LINC00643-201ENST00000334389 GID8Q9NWU2 228 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 PSMD13Q9UNM6 376 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 SLC22A14Q9Y267 594 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 WDFY3Q8IZQ1 3526 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 KMT2DO14686 5537 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 IGHV3OR16-10A0A075B7F0 116 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 IGHV2-26A0A0B4J1V2 119 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 NPIPA5A0A0B4J1W7 369 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 DPPA5A6NC42 116 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 EVPLLA8MZ36 301 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 NPIPA7E9PJI5 369 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 J3QRE1 110 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 FKBP6O75344 327 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 ATP6V1G1O75348 118 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 SLC22A5O76082 557 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 OR7A10O76100 309 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 REG1AP05451 166 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 NPIPA8P0DM63 369 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 HPGDP15428 266 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 RPA2P15927 270 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 SPNP16150 400 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 AMY2BP19961 511 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 TCN1P20061 433 aaPredicted RBP1.05□□□□□ -2.24
LINC00643-201ENST00000334389 RAB4AP20338 218 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 BCL3P20749 454 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 HLA-DMAP28067 261 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 HTR1DP28221 377 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 CD40LGP29965 261 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 FEN1P39748 380 aaKnown RBP1.05□□□□□ -2.24
LINC00643-201ENST00000334389 CSNK1A1P48729 337 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 TMBIM6P55061 237 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 CXCR4P61073 352 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 SNRPGP62308 76 aaKnown RBP1.05□□□□□ -2.24
LINC00643-201ENST00000334389 SF3A3Q12874 501 aaKnown RBP eCLIP1.05□□□□□ -2.24
LINC00643-201ENST00000334389 RGNQ15493 299 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 ZNF79Q15937 498 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 ZNF74Q16587 644 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 NSUN5P1Q3KNT7 163 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 ZBED5Q49AG3 693 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 HSP90AA4PQ58FG1 418 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 GCNT6Q5T4J0 391 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 HES5Q5TA89 166 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 ZFP1Q6P2D0 407 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 ACP7Q6ZNF0 438 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 RASSF6Q6ZTQ3 369 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 CCDC121Q6ZUS5 278 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 MBOAT2Q6ZWT7 520 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 ZNF771Q7L3S4 317 aaPredicted RBP1.05□□□□□ -2.24
LINC00643-201ENST00000334389 TMPRSS11BQ86T26 416 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 TSPYL5Q86VY4 417 aaPredicted RBP1.05□□□□□ -2.24
LINC00643-201ENST00000334389 CYP4Z1Q86W10 505 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 ATG16L2Q8NAA4 619 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 OR1F12Q8NHA8 337 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 RFWD2Q8NHY2 731 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 SELENOMQ8WWX9 145 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 GEMIN6Q8WXD5 167 aaKnown RBP1.05□□□□□ -2.24
LINC00643-201ENST00000334389 UFD1Q92890 307 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 CDS1Q92903 461 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 BORCS5Q969J3 196 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 ORAI1Q96D31 301 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 PACRGQ96M98 296 aaPredicted RBP1.05□□□□□ -2.24
LINC00643-201ENST00000334389 YPEL4Q96NS1 127 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 SPACA5Q96QH8 159 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 OR7D2Q96RA2 312 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 TSC22D3Q99576 134 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 NUAK2Q9H093 628 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 CCNB1IP1Q9NPC3 277 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 NRIP3Q9NQ35 241 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 ACTR3BQ9P1U1 418 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 MYEF2Q9P2K5 600 aaKnown RBP1.05□□□□□ -2.24
LINC00643-201ENST00000334389 ZNF107Q9UII5 783 aaPredicted RBP1.05□□□□□ -2.24
LINC00643-201ENST00000334389 CHMP2BQ9UQN3 213 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 FAM96BQ9Y3D0 163 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 MGAQ8IWI9 3026 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 UNC13CQ8NB66 2214 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 AGRNO00468 2067 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 COL7A1Q02388 2944 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 PIGBOS1A0A0B4J2F0 54 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 TCRBV5S2A0A599 114 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 TCRBV3S1A0A5B6 114 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 SUPT3HB4E1H0 165 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 TMEM238C9JI98 176 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 C15orf65H3BRN8 121 aa1.05□□□□□ -2.24
LINC00643-201ENST00000334389 FXYD1O00168 92 aa1.05□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms