RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 CD300LFQ8TDQ1 290 aa13.52□□□□□ -0.25
PDGFB-201ENST00000331163 MRI1Q9BV20 369 aa13.52□□□□□ -0.25
PDGFB-201ENST00000331163 MRPL37Q9BZE1 423 aaKnown RBP13.52□□□□□ -0.25
PDGFB-201ENST00000331163 GNG12Q9UBI6 72 aa13.52□□□□□ -0.25
PDGFB-201ENST00000331163 HSD17B6O14756 317 aa13.51□□□□□ -0.25
PDGFB-201ENST00000331163 CHRM2P08172 466 aa13.51□□□□□ -0.25
PDGFB-201ENST00000331163 PTAFRP25105 342 aa13.51□□□□□ -0.25
PDGFB-201ENST00000331163 TIMP3P35625 211 aa13.51□□□□□ -0.25
PDGFB-201ENST00000331163 OR4A4PQ8NGN8 299 aa13.51□□□□□ -0.25
PDGFB-201ENST00000331163 MRGPRDQ8TDS7 321 aa13.51□□□□□ -0.25
PDGFB-201ENST00000331163 ITPR1Q14643 2758 aa13.51□□□□□ -0.25
PDGFB-201ENST00000331163 JMJD1CQ15652 2540 aa13.51□□□□□ -0.25
PDGFB-201ENST00000331163 SELLP14151 372 aa13.51□□□□□ -0.25
PDGFB-201ENST00000331163 EPHA1P21709 976 aa13.51□□□□□ -0.25
PDGFB-201ENST00000331163 ZNRF1Q8ND25 227 aa13.51□□□□□ -0.25
PDGFB-201ENST00000331163 CMTM3Q96MX0 182 aa13.51□□□□□ -0.25
PDGFB-201ENST00000331163 PECRQ9BY49 303 aa13.51□□□□□ -0.25
PDGFB-201ENST00000331163 WASF3Q9UPY6 502 aa13.51□□□□□ -0.25
PDGFB-201ENST00000331163 RPL36A-HNRNPH2H7BZ11 118 aa13.51□□□□□ -0.25
PDGFB-201ENST00000331163 ARG1P05089 322 aa13.51□□□□□ -0.25
PDGFB-201ENST00000331163 FCGR2CP31995 323 aa13.51□□□□□ -0.25
PDGFB-201ENST00000331163 ZNF616Q08AN1 781 aa13.51□□□□□ -0.25
PDGFB-201ENST00000331163 C21orf62-AS1Q17RA5 79 aa13.51□□□□□ -0.25
PDGFB-201ENST00000331163 PFDN5Q99471 154 aa13.51□□□□□ -0.25
PDGFB-201ENST00000331163 DCTN5Q9BTE1 182 aa13.51□□□□□ -0.25
PDGFB-201ENST00000331163 SAP30LQ9HAJ7 183 aa13.51□□□□□ -0.25
PDGFB-201ENST00000331163 CRYBG3Q68DQ2 2970 aa13.5□□□□□ -0.25
PDGFB-201ENST00000331163 MSGN1A6NI15 193 aa13.5□□□□□ -0.25
PDGFB-201ENST00000331163 FUT3P21217 361 aa13.5□□□□□ -0.25
PDGFB-201ENST00000331163 PSMB6P28072 239 aa13.5□□□□□ -0.25
PDGFB-201ENST00000331163 CHRNB4P30926 498 aa13.5□□□□□ -0.25
PDGFB-201ENST00000331163 GNRHRP30968 328 aa13.5□□□□□ -0.25
PDGFB-201ENST00000331163 TMEM50BP56557 158 aa13.5□□□□□ -0.25
PDGFB-201ENST00000331163 HNF4GQ14541 408 aa13.5□□□□□ -0.25
PDGFB-201ENST00000331163 C14orf166Q9Y224 244 aaKnown RBP13.5□□□□□ -0.25
PDGFB-201ENST00000331163 POLDIP2Q9Y2S7 368 aa13.5□□□□□ -0.25
PDGFB-201ENST00000331163 MEMO1Q9Y316 297 aa13.5□□□□□ -0.25
PDGFB-201ENST00000331163 KLF2Q9Y5W3 355 aaPredicted RBP13.5□□□□□ -0.25
PDGFB-201ENST00000331163 SLC25A15Q9Y619 301 aa13.5□□□□□ -0.25
PDGFB-201ENST00000331163 ARHGAP32A7KAX9 2087 aa13.5□□□□□ -0.25
PDGFB-201ENST00000331163 IGFBP3P17936 291 aaPredicted RBP13.5□□□□□ -0.25
PDGFB-201ENST00000331163 PDZD11Q5EBL8 140 aa13.5□□□□□ -0.25
PDGFB-201ENST00000331163 TGIF2LYQ8IUE0 185 aa13.5□□□□□ -0.25
PDGFB-201ENST00000331163 SLC25A21Q9BQT8 299 aaPredicted RBP13.5□□□□□ -0.25
PDGFB-201ENST00000331163 DPRXA6NFQ7 191 aa13.49□□□□□ -0.25
PDGFB-201ENST00000331163 OR5H8P0DN80 308 aa13.49□□□□□ -0.25
PDGFB-201ENST00000331163 CDSNQ15517 529 aa13.49□□□□□ -0.25
PDGFB-201ENST00000331163 ZNF600Q6ZNG1 722 aa13.49□□□□□ -0.25
PDGFB-201ENST00000331163 OR13C8Q8NGS7 320 aa13.49□□□□□ -0.25
PDGFB-201ENST00000331163 VKORC1Q9BQB6 163 aa13.49□□□□□ -0.25
PDGFB-201ENST00000331163 RAC2P15153 192 aa13.49□□□□□ -0.25
PDGFB-201ENST00000331163 FSTP19883 344 aa13.49□□□□□ -0.25
PDGFB-201ENST00000331163 OTX1P32242 354 aaPredicted RBP13.49□□□□□ -0.25
PDGFB-201ENST00000331163 A0A0A6YYD4 124 aa13.49□□□□□ -0.25
PDGFB-201ENST00000331163 RPS23P62266 143 aaKnown RBP13.49□□□□□ -0.25
PDGFB-201ENST00000331163 FAM189A2Q15884 450 aa13.49□□□□□ -0.25
PDGFB-201ENST00000331163 LYG2Q86SG7 212 aa13.49□□□□□ -0.25
PDGFB-201ENST00000331163 OR5A2Q8NGI9 324 aa13.49□□□□□ -0.25
PDGFB-201ENST00000331163 GPX8Q8TED1 209 aa13.49□□□□□ -0.25
PDGFB-201ENST00000331163 RRNAD1Q96FB5 475 aaKnown RBP13.49□□□□□ -0.25
PDGFB-201ENST00000331163 CCL13Q99616 98 aa13.49□□□□□ -0.25
PDGFB-201ENST00000331163 EIF5A2Q9GZV4 153 aaKnown RBP13.49□□□□□ -0.25
PDGFB-201ENST00000331163 ZNF286AQ9HBT8 521 aa13.49□□□□□ -0.25
PDGFB-201ENST00000331163 KCNIP1Q9NZI2 227 aa13.49□□□□□ -0.25
PDGFB-201ENST00000331163 MPC1Q9Y5U8 109 aa13.49□□□□□ -0.25
PDGFB-201ENST00000331163 V9GYS6 101 aa13.49□□□□□ -0.25
PDGFB-201ENST00000331163 ASH1LQ9NR48 2969 aaKnown RBP13.49□□□□□ -0.25
PDGFB-201ENST00000331163 ARHGAP21Q5T5U3 1957 aa13.48□□□□□ -0.25
PDGFB-201ENST00000331163 A0A1W2PPH5 198 aa13.48□□□□□ -0.25
PDGFB-201ENST00000331163 C9orf170A2RU37 121 aa13.48□□□□□ -0.25
PDGFB-201ENST00000331163 SH2D1BO14796 132 aa13.48□□□□□ -0.25
PDGFB-201ENST00000331163 GYPAP02724 150 aa13.48□□□□□ -0.25
PDGFB-201ENST00000331163 CDKN1AP38936 164 aa13.48□□□□□ -0.25
PDGFB-201ENST00000331163 S100A12P80511 92 aa13.48□□□□□ -0.25
PDGFB-201ENST00000331163 DHRS7BQ6IAN0 325 aaPredicted RBP13.48□□□□□ -0.25
PDGFB-201ENST00000331163 OR8G5Q8NG78 346 aa13.48□□□□□ -0.25
PDGFB-201ENST00000331163 RBMXL1Q96E39 390 aaKnown RBP13.48□□□□□ -0.25
PDGFB-201ENST00000331163 GP6Q9HCN6 339 aa13.48□□□□□ -0.25
PDGFB-201ENST00000331163 RNASEK-C17orf49H0YIS7 233 aa13.48□□□□□ -0.25
PDGFB-201ENST00000331163 IFNA4P05014 189 aa13.48□□□□□ -0.25
PDGFB-201ENST00000331163 OR8U9P0C7N5 309 aa13.48□□□□□ -0.25
PDGFB-201ENST00000331163 HABP2Q14520 560 aaPredicted RBP13.48□□□□□ -0.25
PDGFB-201ENST00000331163 UQCC3Q6UW78 93 aa13.48□□□□□ -0.25
PDGFB-201ENST00000331163 FAM24BQ8N5W8 94 aa13.48□□□□□ -0.25
PDGFB-201ENST00000331163 OR8U1Q8NH10 309 aa13.48□□□□□ -0.25
PDGFB-201ENST00000331163 LEAP2Q969E1 77 aa13.48□□□□□ -0.25
PDGFB-201ENST00000331163 TECTBQ96PL2 329 aa13.48□□□□□ -0.25
PDGFB-201ENST00000331163 NRIP2Q9BQI9 281 aa13.48□□□□□ -0.25
PDGFB-201ENST00000331163 FN3KRPQ9HA64 309 aa13.48□□□□□ -0.25
PDGFB-201ENST00000331163 COL8A1P27658 744 aa13.48□□□□□ -0.25
PDGFB-201ENST00000331163 PJVKQ0ZLH3 352 aa13.48□□□□□ -0.25
PDGFB-201ENST00000331163 SLC5A7Q9GZV3 580 aa13.48□□□□□ -0.25
PDGFB-201ENST00000331163 TUSC2O75896 110 aa13.47□□□□□ -0.25
PDGFB-201ENST00000331163 TK1P04183 234 aa13.47□□□□□ -0.25
PDGFB-201ENST00000331163 TDGF1P3P51864 188 aa13.47□□□□□ -0.25
PDGFB-201ENST00000331163 MICBQ29980 383 aa13.47□□□□□ -0.25
PDGFB-201ENST00000331163 C1orf100Q5SVJ3 147 aa13.47□□□□□ -0.25
PDGFB-201ENST00000331163 KIRREL1Q96J84 757 aa13.47□□□□□ -0.25
PDGFB-201ENST00000331163 PLSCR2Q9NRY7 297 aa13.47□□□□□ -0.25
PDGFB-201ENST00000331163 PPIHO43447 177 aaKnown RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms