RNA–Protein interactions for RNA: ENST00000328495.9

CCDC144A-201, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2

Gene CCDC144A, Length 3,375 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-201ENST00000328495 CSPG4P5Q96PW8 444 aa0.65□□□□□ -2.31
CCDC144A-201ENST00000328495 DDA1Q9BW61 102 aa0.65□□□□□ -2.31
CCDC144A-201ENST00000328495 ACTR3CQ9C0K3 210 aaPredicted RBP0.65□□□□□ -2.31
CCDC144A-201ENST00000328495 ABCG5Q9H222 651 aa0.65□□□□□ -2.31
CCDC144A-201ENST00000328495 PARP11Q9NR21 331 aa0.65□□□□□ -2.31
CCDC144A-201ENST00000328495 PDP1Q9P0J1 537 aaPredicted RBP0.65□□□□□ -2.31
CCDC144A-201ENST00000328495 DHCR7Q9UBM7 475 aaKnown RBP0.65□□□□□ -2.31
CCDC144A-201ENST00000328495 CFL2Q9Y281 166 aa0.65□□□□□ -2.31
CCDC144A-201ENST00000328495 ZNF257Q9Y2Q1 563 aa0.65□□□□□ -2.31
CCDC144A-201ENST00000328495 KLK5Q9Y337 293 aaPredicted RBP0.65□□□□□ -2.31
CCDC144A-201ENST00000328495 TRAPPC1Q9Y5R8 145 aa0.65□□□□□ -2.31
CCDC144A-201ENST00000328495 ANAPC1Q9H1A4 1944 aa0.65□□□□□ -2.31
CCDC144A-201ENST00000328495 FLG2Q5D862 2391 aaPredicted RBP0.65□□□□□ -2.31
CCDC144A-201ENST00000328495 ATMQ13315 3056 aa0.65□□□□□ -2.31
CCDC144A-201ENST00000328495 TSPAN11A1L157 253 aa0.65□□□□□ -2.31
CCDC144A-201ENST00000328495 A8MWL6 223 aa0.65□□□□□ -2.31
CCDC144A-201ENST00000328495 M0QXV9 152 aa0.65□□□□□ -2.31
CCDC144A-201ENST00000328495 NME4O00746 187 aa0.65□□□□□ -2.31
CCDC144A-201ENST00000328495 DPM1O60762 260 aa0.65□□□□□ -2.31
CCDC144A-201ENST00000328495 DNAJB6O75190 326 aa0.65□□□□□ -2.31
CCDC144A-201ENST00000328495 HLA-DQB1P01920 261 aa0.65□□□□□ -2.31
CCDC144A-201ENST00000328495 RPN2P04844 631 aa0.65□□□□□ -2.31
CCDC144A-201ENST00000328495 CDK1P06493 297 aa0.65□□□□□ -2.31
CCDC144A-201ENST00000328495 SNRPAP09012 282 aaKnown RBP0.65□□□□□ -2.31
CCDC144A-201ENST00000328495 NCK1P16333 377 aa0.65□□□□□ -2.31
CCDC144A-201ENST00000328495 GPX4P36969 197 aaPredicted RBP0.65□□□□□ -2.31
CCDC144A-201ENST00000328495 UBE2E1P51965 193 aa0.65□□□□□ -2.31
CCDC144A-201ENST00000328495 MAP3K7CLP57077 242 aa0.65□□□□□ -2.31
CCDC144A-201ENST00000328495 PPP1CAP62136 330 aa0.65□□□□□ -2.31
CCDC144A-201ENST00000328495 DGCR6Q14129 220 aa0.65□□□□□ -2.31
CCDC144A-201ENST00000328495 AVPI1Q5T686 147 aa0.65□□□□□ -2.31
CCDC144A-201ENST00000328495 REEP3Q6NUK4 255 aa0.65□□□□□ -2.31
CCDC144A-201ENST00000328495 WDR59Q6PJI9 974 aa0.65□□□□□ -2.31
CCDC144A-201ENST00000328495 TMEM205Q6UW68 189 aa0.65□□□□□ -2.31
CCDC144A-201ENST00000328495 UGT2A3Q6UWM9 527 aa0.65□□□□□ -2.31
CCDC144A-201ENST00000328495 FBXW12Q6X9E4 464 aa0.65□□□□□ -2.31
CCDC144A-201ENST00000328495 MBOAT1Q6ZNC8 495 aa0.65□□□□□ -2.31
CCDC144A-201ENST00000328495 SLC16A13Q7RTY0 426 aa0.65□□□□□ -2.31
CCDC144A-201ENST00000328495 UNC93AQ86WB7 457 aa0.65□□□□□ -2.31
CCDC144A-201ENST00000328495 HORMAD1Q86X24 394 aa0.65□□□□□ -2.31
CCDC144A-201ENST00000328495 ITPRIPQ8IWB1 547 aa0.65□□□□□ -2.31
CCDC144A-201ENST00000328495 FAM58AQ8N1B3 248 aa0.65□□□□□ -2.31
CCDC144A-201ENST00000328495 C3orf22Q8N5N4 141 aa0.65□□□□□ -2.31
CCDC144A-201ENST00000328495 ZNF680Q8NEM1 530 aa0.65□□□□□ -2.31
CCDC144A-201ENST00000328495 BPIFCQ8NFQ6 507 aa0.65□□□□□ -2.31
CCDC144A-201ENST00000328495 OR4M1Q8NGD0 313 aa0.65□□□□□ -2.31
CCDC144A-201ENST00000328495 OR10W1Q8NGF6 305 aa0.65□□□□□ -2.31
CCDC144A-201ENST00000328495 OR5M1Q8NGP8 315 aa0.65□□□□□ -2.31
CCDC144A-201ENST00000328495 OR1L6Q8NGR2 347 aa0.65□□□□□ -2.31
CCDC144A-201ENST00000328495 OR1J4Q8NGS1 313 aa0.65□□□□□ -2.31
CCDC144A-201ENST00000328495 LYPD6BQ8NI32 183 aa0.65□□□□□ -2.31
CCDC144A-201ENST00000328495 C1orf54Q8WWF1 131 aa0.65□□□□□ -2.31
CCDC144A-201ENST00000328495 LZICQ8WZA0 190 aa0.65□□□□□ -2.31
CCDC144A-201ENST00000328495 PTX4Q96A99 478 aa0.65□□□□□ -2.31
CCDC144A-201ENST00000328495 HAUS1Q96CS2 278 aa0.65□□□□□ -2.31
CCDC144A-201ENST00000328495 CPNE2Q96FN4 548 aaPredicted RBP0.65□□□□□ -2.31
CCDC144A-201ENST00000328495 UGT2B28Q9BY64 529 aa0.65□□□□□ -2.31
CCDC144A-201ENST00000328495 TBL1XR1Q9BZK7 514 aa0.65□□□□□ -2.31
CCDC144A-201ENST00000328495 OR52D1Q9H346 318 aa0.65□□□□□ -2.31
CCDC144A-201ENST00000328495 EDA2RQ9HAV5 297 aa0.65□□□□□ -2.31
CCDC144A-201ENST00000328495 DYRK4Q9NR20 520 aa0.65□□□□□ -2.31
CCDC144A-201ENST00000328495 IL37Q9NZH6 218 aa0.65□□□□□ -2.31
CCDC144A-201ENST00000328495 VANGL2Q9ULK5 521 aa0.65□□□□□ -2.31
CCDC144A-201ENST00000328495 CBY1Q9Y3M2 126 aa0.65□□□□□ -2.31
CCDC144A-201ENST00000328495 MYH2Q9UKX2 1941 aa0.65□□□□□ -2.31
CCDC144A-201ENST00000328495 A0A0G2JMP0 313 aa0.64□□□□□ -2.31
CCDC144A-201ENST00000328495 A0A0X1KG70 313 aa0.64□□□□□ -2.31
CCDC144A-201ENST00000328495 NCF1BA6NI72 391 aaPredicted RBP0.64□□□□□ -2.31
CCDC144A-201ENST00000328495 SLC22A20A6NK97 555 aa0.64□□□□□ -2.31
CCDC144A-201ENST00000328495 NCF1CA8MVU1 366 aaPredicted RBP0.64□□□□□ -2.31
CCDC144A-201ENST00000328495 H0YJW9 148 aa0.64□□□□□ -2.31
CCDC144A-201ENST00000328495 H7C2Y5 167 aa0.64□□□□□ -2.31
CCDC144A-201ENST00000328495 BIRC5O15392 142 aa0.64□□□□□ -2.31
CCDC144A-201ENST00000328495 NUPL2O15504 423 aaKnown RBP0.64□□□□□ -2.31
CCDC144A-201ENST00000328495 RAD1O60671 282 aa0.64□□□□□ -2.31
CCDC144A-201ENST00000328495 CDH16O75309 829 aa0.64□□□□□ -2.31
CCDC144A-201ENST00000328495 GLSO94925 669 aaPredicted RBP0.64□□□□□ -2.31
CCDC144A-201ENST00000328495 MAS1P04201 325 aa0.64□□□□□ -2.31
CCDC144A-201ENST00000328495 ANXA5P08758 320 aa0.64□□□□□ -2.31
CCDC144A-201ENST00000328495 CD37P11049 281 aa0.64□□□□□ -2.31
CCDC144A-201ENST00000328495 ETS2P15036 469 aa0.64□□□□□ -2.31
CCDC144A-201ENST00000328495 ARL2P36404 184 aa0.64□□□□□ -2.31
CCDC144A-201ENST00000328495 GDI2P50395 445 aaKnown RBP0.64□□□□□ -2.31
CCDC144A-201ENST00000328495 CLDN6P56747 220 aa0.64□□□□□ -2.31
CCDC144A-201ENST00000328495 TAS2R46P59540 309 aa0.64□□□□□ -2.31
CCDC144A-201ENST00000328495 PSMC5P62195 406 aa0.64□□□□□ -2.31
CCDC144A-201ENST00000328495 SP4Q02446 784 aa0.64□□□□□ -2.31
CCDC144A-201ENST00000328495 ADIGQ0VDE8 80 aa0.64□□□□□ -2.31
CCDC144A-201ENST00000328495 DMC1Q14565 340 aa0.64□□□□□ -2.31
CCDC144A-201ENST00000328495 IDNKQ5T6J7 187 aa0.64□□□□□ -2.31
CCDC144A-201ENST00000328495 SLC8B1Q6J4K2 584 aa0.64□□□□□ -2.31
CCDC144A-201ENST00000328495 TMPPEQ6ZT21 453 aa0.64□□□□□ -2.31
CCDC144A-201ENST00000328495 TPGS1Q6ZTW0 290 aa0.64□□□□□ -2.31
CCDC144A-201ENST00000328495 CPNE9Q8IYJ1 553 aa0.64□□□□□ -2.31
CCDC144A-201ENST00000328495 VKORC1L1Q8N0U8 176 aa0.64□□□□□ -2.31
CCDC144A-201ENST00000328495 SYS1Q8N2H4 156 aa0.64□□□□□ -2.31
CCDC144A-201ENST00000328495 C10orf111Q8N326 155 aa0.64□□□□□ -2.31
CCDC144A-201ENST00000328495 ZNF664Q8N3J9 261 aa0.64□□□□□ -2.31
CCDC144A-201ENST00000328495 WDR31Q8NA23 367 aa0.64□□□□□ -2.31
CCDC144A-201ENST00000328495 TTLQ8NG68 377 aa0.64□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms