RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 FAM90A1Q86YD7 464 aa9.89□□□□□ -0.83
COL4A5-201ENST00000328300 LRFN3Q9BTN0 628 aa9.89□□□□□ -0.83
COL4A5-201ENST00000328300 TMPRSS5Q9H3S3 457 aa9.89□□□□□ -0.83
COL4A5-201ENST00000328300 PRSS50Q9UI38 385 aa9.89□□□□□ -0.83
COL4A5-201ENST00000328300 LINC00271P0C7V0 271 aa9.88□□□□□ -0.83
COL4A5-201ENST00000328300 PTGDSP41222 190 aa9.88□□□□□ -0.83
COL4A5-201ENST00000328300 TNXAQ16473 311 aa9.88□□□□□ -0.83
COL4A5-201ENST00000328300 MISP3Q96FF7 219 aa9.88□□□□□ -0.83
COL4A5-201ENST00000328300 C7orf66A4D0T2 115 aa9.88□□□□□ -0.83
COL4A5-201ENST00000328300 MAP1LC3B2A6NCE7 125 aa9.88□□□□□ -0.83
COL4A5-201ENST00000328300 SEC14L6B5MCN3 397 aa9.88□□□□□ -0.83
COL4A5-201ENST00000328300 CTRB1P17538 263 aa9.88□□□□□ -0.83
COL4A5-201ENST00000328300 CTRB2Q6GPI1 263 aa9.88□□□□□ -0.83
COL4A5-201ENST00000328300 ABHD14AQ9BUJ0 271 aa9.88□□□□□ -0.83
COL4A5-201ENST00000328300 MAP1LC3BQ9GZQ8 125 aa9.88□□□□□ -0.83
COL4A5-201ENST00000328300 LPAR5Q9H1C0 372 aa9.88□□□□□ -0.83
COL4A5-201ENST00000328300 PPP1R3EQ9H7J1 279 aa9.88□□□□□ -0.83
COL4A5-201ENST00000328300 SH2D7A6NKC9 451 aaPredicted RBP9.88□□□□□ -0.83
COL4A5-201ENST00000328300 HYAL3O43820 417 aaPredicted RBP9.88□□□□□ -0.83
COL4A5-201ENST00000328300 GAPDHP04406 335 aaKnown RBP9.88□□□□□ -0.83
COL4A5-201ENST00000328300 SFTA3P0C7M3 94 aa9.88□□□□□ -0.83
COL4A5-201ENST00000328300 RAB5AP20339 215 aa9.88□□□□□ -0.83
COL4A5-201ENST00000328300 PIGYQ3MUY2 71 aa9.88□□□□□ -0.83
COL4A5-201ENST00000328300 SSX7Q7RTT5 188 aa9.88□□□□□ -0.83
COL4A5-201ENST00000328300 BCL2L2Q92843 193 aaPredicted RBP9.88□□□□□ -0.83
COL4A5-201ENST00000328300 FAM90A26D6RGX4 464 aa9.88□□□□□ -0.83
COL4A5-201ENST00000328300 SYNGR3O43761 229 aa9.88□□□□□ -0.83
COL4A5-201ENST00000328300 SEMA7AO75326 666 aa9.88□□□□□ -0.83
COL4A5-201ENST00000328300 SPP1P10451 314 aa9.88□□□□□ -0.83
COL4A5-201ENST00000328300 NAT1P18440 290 aa9.88□□□□□ -0.83
COL4A5-201ENST00000328300 TNFSF10P50591 281 aa9.88□□□□□ -0.83
COL4A5-201ENST00000328300 ZNF260Q3ZCT1 412 aa9.88□□□□□ -0.83
COL4A5-201ENST00000328300 TMEM104Q8NE00 496 aa9.88□□□□□ -0.83
COL4A5-201ENST00000328300 CCL28Q9NRJ3 127 aa9.88□□□□□ -0.83
COL4A5-201ENST00000328300 JPT1Q9UK76 154 aa9.88□□□□□ -0.83
COL4A5-201ENST00000328300 RNASEK-C17orf49H0YIS7 233 aa9.88□□□□□ -0.83
COL4A5-201ENST00000328300 RTP5Q14D33 572 aa9.88□□□□□ -0.83
COL4A5-201ENST00000328300 DMRTC1Q5HYR2 192 aa9.88□□□□□ -0.83
COL4A5-201ENST00000328300 ABLIM2Q6H8Q1 611 aa9.88□□□□□ -0.83
COL4A5-201ENST00000328300 DHRS7BQ6IAN0 325 aaPredicted RBP9.88□□□□□ -0.83
COL4A5-201ENST00000328300 GOSR1O95249 250 aa9.88□□□□□ -0.83
COL4A5-201ENST00000328300 ONECUT2O95948 504 aa9.88□□□□□ -0.83
COL4A5-201ENST00000328300 CTSBP07858 339 aa9.88□□□□□ -0.83
COL4A5-201ENST00000328300 OR5R1Q8NH85 324 aa9.88□□□□□ -0.83
COL4A5-201ENST00000328300 AQP3Q92482 292 aa9.88□□□□□ -0.83
COL4A5-201ENST00000328300 PIMREGQ9BSJ6 248 aa9.88□□□□□ -0.83
COL4A5-201ENST00000328300 NARFLQ9H6Q4 476 aa9.88□□□□□ -0.83
COL4A5-201ENST00000328300 ZNF729A6NN14 1252 aaPredicted RBP9.87□□□□□ -0.83
COL4A5-201ENST00000328300 GUK1Q16774 197 aa9.87□□□□□ -0.83
COL4A5-201ENST00000328300 LGALSLQ3ZCW2 172 aaPredicted RBP9.87□□□□□ -0.83
COL4A5-201ENST00000328300 KLHDC1Q8N7A1 406 aa9.87□□□□□ -0.83
COL4A5-201ENST00000328300 OR2V2Q96R30 315 aa9.87□□□□□ -0.83
COL4A5-201ENST00000328300 SIRT4Q9Y6E7 314 aaPredicted RBP9.87□□□□□ -0.83
COL4A5-201ENST00000328300 FABP9Q0Z7S8 132 aa9.87□□□□□ -0.83
COL4A5-201ENST00000328300 PNRC1Q12796 327 aaPredicted RBP9.87□□□□□ -0.83
COL4A5-201ENST00000328300 SLC24A4Q8NFF2 622 aa9.87□□□□□ -0.83
COL4A5-201ENST00000328300 SCMH1Q96GD3 660 aa9.87□□□□□ -0.83
COL4A5-201ENST00000328300 CISD1Q9NZ45 108 aaKnown RBP9.87□□□□□ -0.83
COL4A5-201ENST00000328300 ARL2-SNX15V9GYD0 113 aa9.87□□□□□ -0.83
COL4A5-201ENST00000328300 GLRXP35754 106 aa9.87□□□□□ -0.83
COL4A5-201ENST00000328300 MPV17P39210 176 aa9.87□□□□□ -0.83
COL4A5-201ENST00000328300 MOGAT2Q3SYC2 334 aa9.87□□□□□ -0.83
COL4A5-201ENST00000328300 GUCD1Q96NT3 240 aa9.87□□□□□ -0.83
COL4A5-201ENST00000328300 FBXL17Q9UF56 701 aa9.87□□□□□ -0.83
COL4A5-201ENST00000328300 SPAG17Q6Q759 2223 aa9.87□□□□□ -0.83
COL4A5-201ENST00000328300 A0A1W2PPQ1 181 aa9.87□□□□□ -0.83
COL4A5-201ENST00000328300 FAM24AA6NFZ4 105 aa9.87□□□□□ -0.83
COL4A5-201ENST00000328300 GTF2H5Q6ZYL4 71 aa9.87□□□□□ -0.83
COL4A5-201ENST00000328300 LRRC75AQ8NAA5 344 aa9.87□□□□□ -0.83
COL4A5-201ENST00000328300 FDCSPQ8NFU4 85 aa9.87□□□□□ -0.83
COL4A5-201ENST00000328300 HARBI1Q96MB7 349 aa9.87□□□□□ -0.83
COL4A5-201ENST00000328300 MSL2Q9HCI7 577 aa9.87□□□□□ -0.83
COL4A5-201ENST00000328300 MPDU1O75352 247 aa9.86□□□□□ -0.83
COL4A5-201ENST00000328300 UMODP07911 640 aa9.86□□□□□ -0.83
COL4A5-201ENST00000328300 MUC1P15941 1255 aaPredicted RBP9.86□□□□□ -0.83
COL4A5-201ENST00000328300 G0S2P27469 103 aa9.86□□□□□ -0.83
COL4A5-201ENST00000328300 UCP3P55916 312 aa9.86□□□□□ -0.83
COL4A5-201ENST00000328300 TGIF1Q15583 401 aa9.86□□□□□ -0.83
COL4A5-201ENST00000328300 HSD17B13Q7Z5P4 300 aaPredicted RBP9.86□□□□□ -0.83
COL4A5-201ENST00000328300 MRGPRGQ86SM5 289 aa9.86□□□□□ -0.83
COL4A5-201ENST00000328300 CALHM1Q8IU99 346 aa9.86□□□□□ -0.83
COL4A5-201ENST00000328300 ZNF645Q8N7E2 425 aa9.86□□□□□ -0.83
COL4A5-201ENST00000328300 OR10G4Q8NGN3 311 aa9.86□□□□□ -0.83
COL4A5-201ENST00000328300 OR10G9Q8NGN4 311 aa9.86□□□□□ -0.83
COL4A5-201ENST00000328300 OR10G7Q8NGN6 311 aa9.86□□□□□ -0.83
COL4A5-201ENST00000328300 AICDAQ9GZX7 198 aa9.86□□□□□ -0.83
COL4A5-201ENST00000328300 LPAR2Q9HBW0 351 aa9.86□□□□□ -0.83
COL4A5-201ENST00000328300 CLCF1Q9UBD9 225 aa9.86□□□□□ -0.83
COL4A5-201ENST00000328300 C19orf67A6NJJ6 358 aa9.86□□□□□ -0.83
COL4A5-201ENST00000328300 H3BP45 60 aa9.86□□□□□ -0.83
COL4A5-201ENST00000328300 INPP5JQ15735 1006 aaPredicted RBP9.86□□□□□ -0.83
COL4A5-201ENST00000328300 SMDT1Q9H4I9 107 aa9.86□□□□□ -0.83
COL4A5-201ENST00000328300 PLAC9Q5JTB6 97 aa9.86□□□□□ -0.83
COL4A5-201ENST00000328300 NSUN5P2Q63ZY6 315 aa9.86□□□□□ -0.83
COL4A5-201ENST00000328300 KLK13Q9UKR3 277 aa9.86□□□□□ -0.83
COL4A5-201ENST00000328300 ZNF320A2RRD8 509 aa9.86□□□□□ -0.83
COL4A5-201ENST00000328300 OR2H2O95918 312 aa9.86□□□□□ -0.83
COL4A5-201ENST00000328300 ADRA2AP08913 450 aa9.86□□□□□ -0.83
COL4A5-201ENST00000328300 ZNF79Q15937 498 aa9.86□□□□□ -0.83
COL4A5-201ENST00000328300 OR1L1Q8NH94 360 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms