RNA–Protein interactions for RNA: ENST00000324554.9

USHBP1-202, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2

Gene USHBP1, Length 2,402 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-202ENST00000324554 S100A12P80511 92 aa13.69□□□□□ -0.22
USHBP1-202ENST00000324554 PLP2Q04941 152 aa13.69□□□□□ -0.22
USHBP1-202ENST00000324554 SUMF2Q8NBJ7 301 aa13.69□□□□□ -0.22
USHBP1-202ENST00000324554 PLPPR1Q8TBJ4 325 aa13.69□□□□□ -0.22
USHBP1-202ENST00000324554 SPIN2AQ99865 258 aa13.69□□□□□ -0.22
USHBP1-202ENST00000324554 SPIN2BQ9BPZ2 258 aa13.69□□□□□ -0.22
USHBP1-202ENST00000324554 CCL28Q9NRJ3 127 aa13.69□□□□□ -0.22
USHBP1-202ENST00000324554 DLL3Q9NYJ7 618 aa13.69□□□□□ -0.22
USHBP1-202ENST00000324554 CTXN2P0C2S0 81 aa13.69□□□□□ -0.22
USHBP1-202ENST00000324554 HOXB1P14653 301 aaPredicted RBP13.69□□□□□ -0.22
USHBP1-202ENST00000324554 DYNLT3P51808 116 aa13.69□□□□□ -0.22
USHBP1-202ENST00000324554 RPS23P62266 143 aaKnown RBP13.69□□□□□ -0.22
USHBP1-202ENST00000324554 SOHLH1Q5JUK2 328 aa13.69□□□□□ -0.22
USHBP1-202ENST00000324554 C20orf204Q6ZNR8 217 aa13.69□□□□□ -0.22
USHBP1-202ENST00000324554 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.69□□□□□ -0.22
USHBP1-202ENST00000324554 TMEM217Q8N7C4 229 aa13.69□□□□□ -0.22
USHBP1-202ENST00000324554 MRPL30Q8TCC3 161 aaKnown RBP13.69□□□□□ -0.22
USHBP1-202ENST00000324554 PRSS50Q9UI38 385 aa13.69□□□□□ -0.22
USHBP1-202ENST00000324554 RBFOX3A6NFN3 312 aa13.68□□□□□ -0.22
USHBP1-202ENST00000324554 C3orf80F5H4A9 247 aa13.68□□□□□ -0.22
USHBP1-202ENST00000324554 TNFSF12O43508 249 aa13.68□□□□□ -0.22
USHBP1-202ENST00000324554 UCP1P25874 307 aa13.68□□□□□ -0.22
USHBP1-202ENST00000324554 MEOX1P50221 254 aa13.68□□□□□ -0.22
USHBP1-202ENST00000324554 RUNX1Q01196 453 aa13.68□□□□□ -0.22
USHBP1-202ENST00000324554 HIKESHIQ53FT3 197 aa13.68□□□□□ -0.22
USHBP1-202ENST00000324554 LINC00596Q86U02 117 aa13.68□□□□□ -0.22
USHBP1-202ENST00000324554 MCEMP1Q8IX19 187 aa13.68□□□□□ -0.22
USHBP1-202ENST00000324554 LIPGQ9Y5X9 500 aa13.68□□□□□ -0.22
USHBP1-202ENST00000324554 CLEC18AA5D8T8 446 aa13.68□□□□□ -0.22
USHBP1-202ENST00000324554 ANKRD30BLA7E2S9 258 aa13.68□□□□□ -0.22
USHBP1-202ENST00000324554 IL18BPO95998 194 aa13.68□□□□□ -0.22
USHBP1-202ENST00000324554 IGHV2-5P01817 119 aa13.68□□□□□ -0.22
USHBP1-202ENST00000324554 SP1P08047 785 aa13.68□□□□□ -0.22
USHBP1-202ENST00000324554 ARG2P78540 354 aa13.68□□□□□ -0.22
USHBP1-202ENST00000324554 ID3Q02535 119 aa13.68□□□□□ -0.22
USHBP1-202ENST00000324554 PCSK4Q6UW60 755 aa13.68□□□□□ -0.22
USHBP1-202ENST00000324554 CLEC18CQ8NCF0 446 aa13.68□□□□□ -0.22
USHBP1-202ENST00000324554 DMXL2Q8TDJ6 3036 aa13.68□□□□□ -0.22
USHBP1-202ENST00000324554 GTF3AQ92664 365 aaKnown RBP13.68□□□□□ -0.22
USHBP1-202ENST00000324554 YPEL4Q96NS1 127 aa13.68□□□□□ -0.22
USHBP1-202ENST00000324554 OR51B6Q9H340 312 aa13.68□□□□□ -0.22
USHBP1-202ENST00000324554 PLK3Q9H4B4 646 aa13.68□□□□□ -0.22
USHBP1-202ENST00000324554 C12orf49Q9H741 205 aa13.68□□□□□ -0.22
USHBP1-202ENST00000324554 METTL1Q9UBP6 276 aaKnown RBP13.68□□□□□ -0.22
USHBP1-202ENST00000324554 TM4SF5O14894 197 aa13.67□□□□□ -0.22
USHBP1-202ENST00000324554 OR8U8P0C7N1 319 aa13.67□□□□□ -0.22
USHBP1-202ENST00000324554 SMIM6P0DI80 62 aa13.67□□□□□ -0.22
USHBP1-202ENST00000324554 APLNRP35414 380 aa13.67□□□□□ -0.22
USHBP1-202ENST00000324554 VAMP2P63027 116 aa13.67□□□□□ -0.22
USHBP1-202ENST00000324554 HAGHQ16775 308 aa13.67□□□□□ -0.22
USHBP1-202ENST00000324554 SP5Q6BEB4 398 aaPredicted RBP13.67□□□□□ -0.22
USHBP1-202ENST00000324554 C17orf78Q8N4C9 275 aa13.67□□□□□ -0.22
USHBP1-202ENST00000324554 SLC25A31Q9H0C2 315 aa13.67□□□□□ -0.22
USHBP1-202ENST00000324554 RIMS4Q9H426 269 aaPredicted RBP13.67□□□□□ -0.22
USHBP1-202ENST00000324554 SEBOXQ9HB31 216 aaPredicted RBP13.67□□□□□ -0.22
USHBP1-202ENST00000324554 MPC1Q9Y5U8 109 aa13.67□□□□□ -0.22
USHBP1-202ENST00000324554 DOCK7Q96N67 2140 aa13.67□□□□□ -0.22
USHBP1-202ENST00000324554 ARHGAP21Q5T5U3 1957 aa13.67□□□□□ -0.22
USHBP1-202ENST00000324554 TRAV24A0A0B4J272 114 aa13.66□□□□□ -0.22
USHBP1-202ENST00000324554 DUXBA0A1W2PPF3 345 aa13.66□□□□□ -0.22
USHBP1-202ENST00000324554 OR5B21A6NL26 309 aa13.66□□□□□ -0.22
USHBP1-202ENST00000324554 HS3ST1O14792 307 aa13.66□□□□□ -0.22
USHBP1-202ENST00000324554 CHST1O43916 411 aa13.66□□□□□ -0.22
USHBP1-202ENST00000324554 SLC34A2O95436 690 aa13.66□□□□□ -0.22
USHBP1-202ENST00000324554 S100A8P05109 93 aa13.66□□□□□ -0.22
USHBP1-202ENST00000324554 NQO2P16083 231 aa13.66□□□□□ -0.22
USHBP1-202ENST00000324554 VDAC1P21796 283 aa13.66□□□□□ -0.22
USHBP1-202ENST00000324554 PMP22Q01453 160 aa13.66□□□□□ -0.22
USHBP1-202ENST00000324554 CLN3Q13286 438 aa13.66□□□□□ -0.22
USHBP1-202ENST00000324554 ZNF573Q86YE8 665 aa13.66□□□□□ -0.22
USHBP1-202ENST00000324554 CMTM1Q8IZ96 169 aa13.66□□□□□ -0.22
USHBP1-202ENST00000324554 MDS2Q8NDY4 140 aa13.66□□□□□ -0.22
USHBP1-202ENST00000324554 RDH5Q92781 318 aa13.66□□□□□ -0.22
USHBP1-202ENST00000324554 ABHD14BQ96IU4 210 aa13.66□□□□□ -0.22
USHBP1-202ENST00000324554 DEFB127Q9H1M4 99 aa13.66□□□□□ -0.22
USHBP1-202ENST00000324554 FBP1P09467 338 aa13.66□□□□□ -0.22
USHBP1-202ENST00000324554 CEACAM1P13688 526 aa13.66□□□□□ -0.22
USHBP1-202ENST00000324554 PAX9P55771 341 aa13.66□□□□□ -0.22
USHBP1-202ENST00000324554 GNG3P63215 75 aa13.66□□□□□ -0.22
USHBP1-202ENST00000324554 ZNF154Q13106 437 aa13.66□□□□□ -0.22
USHBP1-202ENST00000324554 FDCSPQ8NFU4 85 aa13.66□□□□□ -0.22
USHBP1-202ENST00000324554 OR1K1Q8NGR3 316 aa13.66□□□□□ -0.22
USHBP1-202ENST00000324554 MALSU1Q96EH3 234 aa13.66□□□□□ -0.22
USHBP1-202ENST00000324554 TAAR3PQ9P1P4 343 aa13.66□□□□□ -0.22
USHBP1-202ENST00000324554 KLF13Q9Y2Y9 288 aaPredicted RBP13.66□□□□□ -0.22
USHBP1-202ENST00000324554 RNF115Q9Y4L5 304 aa13.66□□□□□ -0.22
USHBP1-202ENST00000324554 TRBV6-6A0A0A6YYG2 114 aa13.65□□□□□ -0.22
USHBP1-202ENST00000324554 A0A0G2JRQ6 117 aa13.65□□□□□ -0.22
USHBP1-202ENST00000324554 H0Y980 276 aa13.65□□□□□ -0.22
USHBP1-202ENST00000324554 PGLYRP1O75594 196 aaPredicted RBP13.65□□□□□ -0.22
USHBP1-202ENST00000324554 OR2C1O95371 312 aa13.65□□□□□ -0.22
USHBP1-202ENST00000324554 IL24Q13007 206 aa13.65□□□□□ -0.22
USHBP1-202ENST00000324554 RNFT1Q5M7Z0 435 aa13.65□□□□□ -0.22
USHBP1-202ENST00000324554 OR2T2Q6IF00 324 aa13.65□□□□□ -0.22
USHBP1-202ENST00000324554 FAM58AQ8N1B3 248 aa13.65□□□□□ -0.22
USHBP1-202ENST00000324554 OR5D13Q8NGL4 314 aa13.65□□□□□ -0.22
USHBP1-202ENST00000324554 SMDT1Q9H4I9 107 aa13.65□□□□□ -0.22
USHBP1-202ENST00000324554 HSPA12AO43301 675 aa13.65□□□□□ -0.22
USHBP1-202ENST00000324554 RHBDL1O75783 438 aa13.65□□□□□ -0.22
USHBP1-202ENST00000324554 CA6P23280 308 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms