RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 OR4D10Q8NGI6 311 aa13.85□□□□□ -0.19
USP42-201ENST00000306177 CDRT15L2A8MXV6 281 aa13.85□□□□□ -0.19
USP42-201ENST00000306177 MS4A18H0YCH9 400 aa13.85□□□□□ -0.19
USP42-201ENST00000306177 CCL21O00585 134 aa13.85□□□□□ -0.19
USP42-201ENST00000306177 PHOX2AO14813 284 aa13.85□□□□□ -0.19
USP42-201ENST00000306177 FABP4P15090 132 aa13.85□□□□□ -0.19
USP42-201ENST00000306177 PRDX2P32119 198 aa13.85□□□□□ -0.19
USP42-201ENST00000306177 FGF12P61328 243 aa13.85□□□□□ -0.19
USP42-201ENST00000306177 HIST1H3AP68431 136 aa13.85□□□□□ -0.19
USP42-201ENST00000306177 RNF151Q2KHN1 245 aa13.85□□□□□ -0.19
USP42-201ENST00000306177 MS4A18Q3C1V0 323 aa13.85□□□□□ -0.19
USP42-201ENST00000306177 BSXQ3C1V8 233 aa13.85□□□□□ -0.19
USP42-201ENST00000306177 TMEM65Q6PI78 240 aa13.85□□□□□ -0.19
USP42-201ENST00000306177 COA4Q9NYJ1 87 aa13.85□□□□□ -0.19
USP42-201ENST00000306177 FCN1O00602 326 aa13.85□□□□□ -0.19
USP42-201ENST00000306177 ZNF345Q14585 488 aa13.85□□□□□ -0.19
USP42-201ENST00000306177 RASL11BQ9BPW5 248 aa13.85□□□□□ -0.19
USP42-201ENST00000306177 CLN8Q9UBY8 286 aa13.85□□□□□ -0.19
USP42-201ENST00000306177 KCNK7Q9Y2U2 307 aa13.85□□□□□ -0.19
USP42-201ENST00000306177 PPIAL4EA0A075B759 164 aa13.85□□□□□ -0.19
USP42-201ENST00000306177 TMEM218A2RU14 115 aa13.85□□□□□ -0.19
USP42-201ENST00000306177 PRR33A8MZF0 331 aa13.85□□□□□ -0.19
USP42-201ENST00000306177 AHRRA9YTQ3 701 aa13.85□□□□□ -0.19
USP42-201ENST00000306177 PPIAL4DF5H284 164 aa13.85□□□□□ -0.19
USP42-201ENST00000306177 PPIAL4FP0DN26 164 aa13.85□□□□□ -0.19
USP42-201ENST00000306177 SFTPCP11686 197 aa13.85□□□□□ -0.19
USP42-201ENST00000306177 PPIAL4AQ9Y536 164 aa13.85□□□□□ -0.19
USP42-201ENST00000306177 C11orf94C9JXX5 98 aa13.84□□□□□ -0.19
USP42-201ENST00000306177 NKX2-8O15522 239 aa13.84□□□□□ -0.19
USP42-201ENST00000306177 GNG7O60262 68 aa13.84□□□□□ -0.19
USP42-201ENST00000306177 HLA-DQB1P01920 261 aa13.84□□□□□ -0.19
USP42-201ENST00000306177 STPG2Q8N412 459 aa13.84□□□□□ -0.19
USP42-201ENST00000306177 SLC25A10Q9UBX3 287 aaPredicted RBP13.84□□□□□ -0.19
USP42-201ENST00000306177 COX6A1P12074 109 aa13.84□□□□□ -0.19
USP42-201ENST00000306177 FAM78BQ5VT40 261 aa13.84□□□□□ -0.19
USP42-201ENST00000306177 WDR73Q6P4I2 378 aa13.84□□□□□ -0.19
USP42-201ENST00000306177 FAM181AQ8N9Y4 354 aa13.84□□□□□ -0.19
USP42-201ENST00000306177 SPTBP11277 2137 aa13.84□□□□□ -0.19
USP42-201ENST00000306177 KIAA1324LA8MWY0 1029 aaPredicted RBP13.84□□□□□ -0.19
USP42-201ENST00000306177 SP9P0CG40 484 aa13.84□□□□□ -0.19
USP42-201ENST00000306177 SRP14P37108 136 aaKnown RBP13.84□□□□□ -0.19
USP42-201ENST00000306177 SPCS3P61009 180 aa13.84□□□□□ -0.19
USP42-201ENST00000306177 IFITM3Q01628 133 aa13.84□□□□□ -0.19
USP42-201ENST00000306177 LPAR5Q9H1C0 372 aa13.84□□□□□ -0.19
USP42-201ENST00000306177 PIKFYVEQ9Y2I7 2098 aa13.84□□□□□ -0.19
USP42-201ENST00000306177 PPP1CCP36873 323 aaKnown RBP13.84□□□□□ -0.19
USP42-201ENST00000306177 RNASEKQ6P5S7 137 aaKnown RBP13.84□□□□□ -0.19
USP42-201ENST00000306177 CD200R1LQ6Q8B3 271 aa13.84□□□□□ -0.19
USP42-201ENST00000306177 SSMEM1Q8WWF3 244 aa13.83□□□□□ -0.19
USP42-201ENST00000306177 DIRC2Q96SL1 478 aa13.83□□□□□ -0.19
USP42-201ENST00000306177 VPS25Q9BRG1 176 aa13.83□□□□□ -0.19
USP42-201ENST00000306177 OPN3Q9H1Y3 402 aaPredicted RBP13.83□□□□□ -0.19
USP42-201ENST00000306177 VAX2Q9UIW0 290 aa13.83□□□□□ -0.19
USP42-201ENST00000306177 LTBRP36941 435 aa13.83□□□□□ -0.2
USP42-201ENST00000306177 PSG5Q15238 335 aa13.83□□□□□ -0.2
USP42-201ENST00000306177 OR4P4Q8NGL7 312 aa13.83□□□□□ -0.2
USP42-201ENST00000306177 VWCEQ96DN2 955 aa13.83□□□□□ -0.2
USP42-201ENST00000306177 LINC00052Q96N35 136 aa13.83□□□□□ -0.2
USP42-201ENST00000306177 RCC2Q9P258 522 aaKnown RBP13.83□□□□□ -0.2
USP42-201ENST00000306177 LEUTXA8MZ59 168 aa13.83□□□□□ -0.2
USP42-201ENST00000306177 RPL31P62899 125 aaKnown RBP13.83□□□□□ -0.2
USP42-201ENST00000306177 SIGIRRQ6IA17 410 aa13.83□□□□□ -0.2
USP42-201ENST00000306177 CRIPAKQ8N1N5 446 aa13.83□□□□□ -0.2
USP42-201ENST00000306177 ABHD14AQ9BUJ0 271 aa13.83□□□□□ -0.2
USP42-201ENST00000306177 TNFSF18Q9UNG2 199 aa13.83□□□□□ -0.2
USP42-201ENST00000306177 RD3LP0DJH9 198 aa13.83□□□□□ -0.2
USP42-201ENST00000306177 AWAT1Q58HT5 328 aa13.83□□□□□ -0.2
USP42-201ENST00000306177 ZNF788Q6ZQV5 615 aa13.83□□□□□ -0.2
USP42-201ENST00000306177 ZNF519Q8TB69 540 aa13.83□□□□□ -0.2
USP42-201ENST00000306177 DNASE2O00115 360 aaPredicted RBP13.82□□□□□ -0.2
USP42-201ENST00000306177 MGST3O14880 152 aa13.82□□□□□ -0.2
USP42-201ENST00000306177 SEC11BP0C7V7 166 aa13.82□□□□□ -0.2
USP42-201ENST00000306177 ACP1P24666 158 aa13.82□□□□□ -0.2
USP42-201ENST00000306177 NPY1RP25929 384 aa13.82□□□□□ -0.2
USP42-201ENST00000306177 HTR1DP28221 377 aa13.82□□□□□ -0.2
USP42-201ENST00000306177 IQCJQ1A5X6 159 aa13.82□□□□□ -0.2
USP42-201ENST00000306177 C1orf100Q5SVJ3 147 aa13.82□□□□□ -0.2
USP42-201ENST00000306177 OR1L8Q8NGR8 309 aa13.82□□□□□ -0.2
USP42-201ENST00000306177 VAMP8Q9BV40 100 aa13.82□□□□□ -0.2
USP42-201ENST00000306177 SEC11CQ9BY50 192 aa13.82□□□□□ -0.2
USP42-201ENST00000306177 ANAPC16Q96DE5 110 aa13.82□□□□□ -0.2
USP42-201ENST00000306177 LHFPL6Q9Y693 200 aa13.82□□□□□ -0.2
USP42-201ENST00000306177 IGKV1D-42A0A075B6H8 117 aa13.82□□□□□ -0.2
USP42-201ENST00000306177 SNRPEP62304 92 aaKnown RBP13.82□□□□□ -0.2
USP42-201ENST00000306177 PCOLCEQ15113 449 aa13.82□□□□□ -0.2
USP42-201ENST00000306177 C1QTNF12Q5T7M4 302 aa13.82□□□□□ -0.2
USP42-201ENST00000306177 ADAMTS17Q8TE56 1095 aa13.82□□□□□ -0.2
USP42-201ENST00000306177 CHRNA10Q9GZZ6 450 aa13.82□□□□□ -0.2
USP42-201ENST00000306177 PARP11Q9NR21 331 aa13.82□□□□□ -0.2
USP42-201ENST00000306177 C19orf35Q6ZS72 473 aa13.82□□□□□ -0.2
USP42-201ENST00000306177 OR10D4PQ8NGN7 298 aa13.82□□□□□ -0.2
USP42-201ENST00000306177 TRBV5-7A0A0A0MS05 114 aa13.81□□□□□ -0.2
USP42-201ENST00000306177 CLDN14O95500 239 aa13.81□□□□□ -0.2
USP42-201ENST00000306177 GAMTQ14353 236 aa13.81□□□□□ -0.2
USP42-201ENST00000306177 RIPPLY2Q5TAB7 128 aa13.81□□□□□ -0.2
USP42-201ENST00000306177 TOMM20LQ6UXN7 152 aa13.81□□□□□ -0.2
USP42-201ENST00000306177 SLC35E3Q7Z769 313 aa13.81□□□□□ -0.2
USP42-201ENST00000306177 FAM90A10PA6NDY2 464 aa13.81□□□□□ -0.2
USP42-201ENST00000306177 FAM90A18PA6NE21 464 aa13.81□□□□□ -0.2
USP42-201ENST00000306177 FAM90A16PA6NEW6 464 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms