RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 BCL2P10415 239 aa11.5□□□□□ -0.57
DDX54-201ENST00000306014 NPBWR2P48146 333 aa11.5□□□□□ -0.57
DDX54-201ENST00000306014 TRA2AQ13595 282 aaKnown RBP eCLIP11.5□□□□□ -0.57
DDX54-201ENST00000306014 TP53RKQ96S44 253 aa11.5□□□□□ -0.57
DDX54-201ENST00000306014 AUP1Q9Y679 476 aa11.5□□□□□ -0.57
DDX54-201ENST00000306014 A0A1W2PR77 199 aa11.49□□□□□ -0.57
DDX54-201ENST00000306014 SHISA7A6NL88 538 aa11.49□□□□□ -0.57
DDX54-201ENST00000306014 FGF16O43320 207 aa11.49□□□□□ -0.57
DDX54-201ENST00000306014 MMP7P09237 267 aaPredicted RBP11.49□□□□□ -0.57
DDX54-201ENST00000306014 NDUFB7P17568 137 aa11.49□□□□□ -0.57
DDX54-201ENST00000306014 RAB4AP20338 218 aa11.49□□□□□ -0.57
DDX54-201ENST00000306014 PMELP40967 661 aa11.49□□□□□ -0.57
DDX54-201ENST00000306014 ERVFC1-1P60608 527 aa11.49□□□□□ -0.57
DDX54-201ENST00000306014 KRTDAPP60985 99 aa11.49□□□□□ -0.57
DDX54-201ENST00000306014 ZNF718Q3SXZ3 478 aa11.49□□□□□ -0.57
DDX54-201ENST00000306014 GPR61Q9BZJ8 451 aa11.49□□□□□ -0.57
DDX54-201ENST00000306014 FUT9Q9Y231 359 aa11.49□□□□□ -0.57
DDX54-201ENST00000306014 TGIF2-C20orf24A0A0A6YYL0 155 aa11.49□□□□□ -0.57
DDX54-201ENST00000306014 F8VVB4 439 aa11.49□□□□□ -0.57
DDX54-201ENST00000306014 F8VWA3 439 aa11.49□□□□□ -0.57
DDX54-201ENST00000306014 NUFIP2Q7Z417 695 aaKnown RBP11.49□□□□□ -0.57
DDX54-201ENST00000306014 TCFL5Q9UL49 500 aa11.49□□□□□ -0.57
DDX54-201ENST00000306014 LYZL6O75951 148 aa11.49□□□□□ -0.57
DDX54-201ENST00000306014 RPL29P47914 159 aaKnown RBP11.49□□□□□ -0.57
DDX54-201ENST00000306014 ZNF343Q6P1L6 599 aa11.49□□□□□ -0.57
DDX54-201ENST00000306014 POM121Q96HA1 1249 aa11.49□□□□□ -0.57
DDX54-201ENST00000306014 MS4A10Q96PG2 267 aa11.49□□□□□ -0.57
DDX54-201ENST00000306014 ANGPTL4Q9BY76 406 aa11.49□□□□□ -0.57
DDX54-201ENST00000306014 Q9N2K0 584 aa11.49□□□□□ -0.57
DDX54-201ENST00000306014 ZNF586Q9NXT0 402 aa11.49□□□□□ -0.57
DDX54-201ENST00000306014 IGKV1-9A0A0C4DH69 117 aa11.49□□□□□ -0.57
DDX54-201ENST00000306014 PAGE4O60829 102 aa11.49□□□□□ -0.57
DDX54-201ENST00000306014 THBS3P49746 956 aa11.49□□□□□ -0.57
DDX54-201ENST00000306014 RNPS1Q15287 305 aaKnown RBP11.49□□□□□ -0.57
DDX54-201ENST00000306014 PHYHD1Q5SRE7 291 aa11.49□□□□□ -0.57
DDX54-201ENST00000306014 FAM166AQ6J272 317 aa11.49□□□□□ -0.57
DDX54-201ENST00000306014 H1FOOQ8IZA3 346 aaPredicted RBP11.49□□□□□ -0.57
DDX54-201ENST00000306014 OR5A2Q8NGI9 324 aa11.49□□□□□ -0.57
DDX54-201ENST00000306014 MRPL30Q8TCC3 161 aaKnown RBP11.49□□□□□ -0.57
DDX54-201ENST00000306014 SPSB2Q99619 263 aa11.49□□□□□ -0.57
DDX54-201ENST00000306014 LYRM2Q9NU23 88 aaPredicted RBP11.49□□□□□ -0.57
DDX54-201ENST00000306014 DNPH1O43598 174 aa11.48□□□□□ -0.57
DDX54-201ENST00000306014 HIST1H3AP68431 136 aa11.48□□□□□ -0.57
DDX54-201ENST00000306014 OR10S1Q8NGN2 331 aa11.48□□□□□ -0.57
DDX54-201ENST00000306014 H1FXQ92522 213 aaKnown RBP11.48□□□□□ -0.57
DDX54-201ENST00000306014 ESPL1Q14674 2120 aa11.48□□□□□ -0.57
DDX54-201ENST00000306014 A0A0A6YYD4 124 aa11.48□□□□□ -0.57
DDX54-201ENST00000306014 TRGV5A0A0B4J1U4 118 aa11.48□□□□□ -0.57
DDX54-201ENST00000306014 C11orf94C9JXX5 98 aa11.48□□□□□ -0.57
DDX54-201ENST00000306014 HSPB1P04792 205 aaKnown RBP11.48□□□□□ -0.57
DDX54-201ENST00000306014 G6PCP35575 357 aa11.48□□□□□ -0.57
DDX54-201ENST00000306014 MAGEA5P43359 124 aa11.48□□□□□ -0.57
DDX54-201ENST00000306014 SSPNQ14714 243 aa11.48□□□□□ -0.57
DDX54-201ENST00000306014 HIKESHIQ53FT3 197 aa11.48□□□□□ -0.57
DDX54-201ENST00000306014 IL22RA2Q969J5 263 aa11.48□□□□□ -0.57
DDX54-201ENST00000306014 WDR54Q9H977 334 aa11.48□□□□□ -0.57
DDX54-201ENST00000306014 NOTCH4Q99466 2003 aa11.48□□□□□ -0.57
DDX54-201ENST00000306014 CACNA1HO95180 2353 aa11.48□□□□□ -0.57
DDX54-201ENST00000306014 EIF3IQ13347 325 aaKnown RBP11.48□□□□□ -0.57
DDX54-201ENST00000306014 RTN4RL2Q86UN3 420 aa11.48□□□□□ -0.57
DDX54-201ENST00000306014 DTD1Q8TEA8 209 aa11.48□□□□□ -0.57
DDX54-201ENST00000306014 CTDSP1Q9GZU7 261 aa11.48□□□□□ -0.57
DDX54-201ENST00000306014 PITPNC1Q9UKF7 332 aa11.48□□□□□ -0.57
DDX54-201ENST00000306014 DUXBA0A1W2PPF3 345 aa11.47□□□□□ -0.57
DDX54-201ENST00000306014 CA11O75493 328 aa11.47□□□□□ -0.57
DDX54-201ENST00000306014 FGF12P61328 243 aa11.47□□□□□ -0.57
DDX54-201ENST00000306014 MRPL13Q9BYD1 178 aaKnown RBP11.47□□□□□ -0.57
DDX54-201ENST00000306014 FAM117AQ9C073 453 aa11.47□□□□□ -0.57
DDX54-201ENST00000306014 AKIRIN1Q9H9L7 192 aaPredicted RBP11.47□□□□□ -0.57
DDX54-201ENST00000306014 H0Y8G0 127 aa11.47□□□□□ -0.57
DDX54-201ENST00000306014 CRYAAP02489 173 aa11.47□□□□□ -0.57
DDX54-201ENST00000306014 SELENOHQ8IZQ5 122 aaKnown RBP11.47□□□□□ -0.57
DDX54-201ENST00000306014 BOD1Q96IK1 185 aa11.47□□□□□ -0.57
DDX54-201ENST00000306014 TAAR9Q96RI9 348 aa11.47□□□□□ -0.57
DDX54-201ENST00000306014 HELZP42694 1942 aaKnown RBP11.47□□□□□ -0.57
DDX54-201ENST00000306014 PATE3B3GLJ2 98 aa11.47□□□□□ -0.57
DDX54-201ENST00000306014 TNFSF15O95150 251 aa11.47□□□□□ -0.57
DDX54-201ENST00000306014 MEOX1P50221 254 aa11.47□□□□□ -0.57
DDX54-201ENST00000306014 CORO2AQ92828 525 aa11.47□□□□□ -0.57
DDX54-201ENST00000306014 CHRNA10Q9GZZ6 450 aa11.47□□□□□ -0.57
DDX54-201ENST00000306014 METTL1Q9UBP6 276 aaKnown RBP11.47□□□□□ -0.57
DDX54-201ENST00000306014 TUBD1Q9UJT1 453 aa11.47□□□□□ -0.57
DDX54-201ENST00000306014 SYNGR1O43759 233 aa11.46□□□□□ -0.57
DDX54-201ENST00000306014 ATP6V1FQ16864 119 aa11.46□□□□□ -0.57
DDX54-201ENST00000306014 ZNF818PQ6ZRF7 136 aa11.46□□□□□ -0.57
DDX54-201ENST00000306014 ZNF837Q96EG3 531 aaPredicted RBP11.46□□□□□ -0.57
DDX54-201ENST00000306014 SRXN1Q9BYN0 137 aa11.46□□□□□ -0.57
DDX54-201ENST00000306014 CLN8Q9UBY8 286 aa11.46□□□□□ -0.57
DDX54-201ENST00000306014 TINAGQ9UJW2 476 aa11.46□□□□□ -0.57
DDX54-201ENST00000306014 SSUH2Q9Y2M2 353 aa11.46□□□□□ -0.57
DDX54-201ENST00000306014 COL4A6Q14031 1691 aa11.46□□□□□ -0.57
DDX54-201ENST00000306014 A0A1W2PQM1 296 aa11.46□□□□□ -0.57
DDX54-201ENST00000306014 J3QT63 122 aa11.46□□□□□ -0.57
DDX54-201ENST00000306014 LDLRAD4O15165 306 aa11.46□□□□□ -0.57
DDX54-201ENST00000306014 TPPP2P59282 170 aa11.46□□□□□ -0.57
DDX54-201ENST00000306014 RNF144BQ7Z419 303 aa11.46□□□□□ -0.57
DDX54-201ENST00000306014 OR2Z1Q8NG97 314 aa11.46□□□□□ -0.57
DDX54-201ENST00000306014 CT55Q8WUE5 264 aa11.46□□□□□ -0.57
DDX54-201ENST00000306014 SLC35E1Q96K37 410 aa11.46□□□□□ -0.57
DDX54-201ENST00000306014 TM2D1Q9BX74 207 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms