RNA–Protein interactions for RNA: ENST00000300917.9

SMG8-201, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG8, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-201ENST00000300917 TMEM222Q9H0R3 208 aa12.3□□□□□ -0.44
SMG8-201ENST00000300917 ATP6V1G2-DDX39BF2Z307 99 aa12.3□□□□□ -0.44
SMG8-201ENST00000300917 PSG2P11465 335 aa12.3□□□□□ -0.44
SMG8-201ENST00000300917 IL13RA2Q14627 380 aa12.3□□□□□ -0.44
SMG8-201ENST00000300917 FAM76BQ5HYJ3 339 aa12.3□□□□□ -0.44
SMG8-201ENST00000300917 BEND4Q6ZU67 534 aa12.3□□□□□ -0.44
SMG8-201ENST00000300917 C11orf53Q8IXP5 236 aa12.3□□□□□ -0.44
SMG8-201ENST00000300917 SPEF1Q9Y4P9 236 aa12.3□□□□□ -0.44
SMG8-201ENST00000300917 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.29□□□□□ -0.44
SMG8-201ENST00000300917 FAM24AA6NFZ4 105 aa12.29□□□□□ -0.44
SMG8-201ENST00000300917 CDK2AP1O14519 115 aa12.29□□□□□ -0.44
SMG8-201ENST00000300917 PGLYRP1O75594 196 aaPredicted RBP12.29□□□□□ -0.44
SMG8-201ENST00000300917 DEFA5Q01523 94 aa12.29□□□□□ -0.44
SMG8-201ENST00000300917 NAAAQ02083 359 aa12.29□□□□□ -0.44
SMG8-201ENST00000300917 HSD17B11Q8NBQ5 300 aa12.29□□□□□ -0.44
SMG8-201ENST00000300917 OR10V1Q8NGI7 309 aa12.29□□□□□ -0.44
SMG8-201ENST00000300917 DHRS9Q9BPW9 319 aa12.29□□□□□ -0.44
SMG8-201ENST00000300917 OR2W1Q9Y3N9 320 aa12.29□□□□□ -0.44
SMG8-201ENST00000300917 SLC25A15Q9Y619 301 aa12.29□□□□□ -0.44
SMG8-201ENST00000300917 MBD3L4A6NDZ8 208 aaPredicted RBP12.29□□□□□ -0.44
SMG8-201ENST00000300917 MBD3L3A6NE82 208 aaPredicted RBP12.29□□□□□ -0.44
SMG8-201ENST00000300917 MBD3L5A6NJ08 208 aaPredicted RBP12.29□□□□□ -0.44
SMG8-201ENST00000300917 GLAP06280 429 aa12.29□□□□□ -0.44
SMG8-201ENST00000300917 UCP3P55916 312 aa12.29□□□□□ -0.44
SMG8-201ENST00000300917 LINC00205P59089 165 aa12.29□□□□□ -0.44
SMG8-201ENST00000300917 ERVK11-1P61568 191 aa12.29□□□□□ -0.44
SMG8-201ENST00000300917 SRSF3P84103 164 aaKnown RBP12.29□□□□□ -0.44
SMG8-201ENST00000300917 C1orf185Q5T7R7 199 aa12.29□□□□□ -0.44
SMG8-201ENST00000300917 TMEM217Q8N7C4 229 aa12.29□□□□□ -0.44
SMG8-201ENST00000300917 MBD3L2Q8NHZ7 208 aaPredicted RBP12.29□□□□□ -0.44
SMG8-201ENST00000300917 LRRC29Q8WV35 223 aa12.29□□□□□ -0.44
SMG8-201ENST00000300917 RBMXL1Q96E39 390 aaKnown RBP12.29□□□□□ -0.44
SMG8-201ENST00000300917 ZDHHC8Q9ULC8 765 aa12.29□□□□□ -0.44
SMG8-201ENST00000300917 USF3Q68DE3 2245 aa12.29□□□□□ -0.44
SMG8-201ENST00000300917 TUBAL3A6NHL2 446 aa12.29□□□□□ -0.44
SMG8-201ENST00000300917 BTN1A1Q13410 526 aa12.29□□□□□ -0.44
SMG8-201ENST00000300917 GNMTQ14749 295 aa12.29□□□□□ -0.44
SMG8-201ENST00000300917 ZNF324BQ6AW86 544 aaPredicted RBP12.29□□□□□ -0.44
SMG8-201ENST00000300917 WDR82Q6UXN9 313 aa12.29□□□□□ -0.44
SMG8-201ENST00000300917 OR52L2PQ8NGH6 319 aa12.29□□□□□ -0.44
SMG8-201ENST00000300917 TAAR3PQ9P1P4 343 aa12.29□□□□□ -0.44
SMG8-201ENST00000300917 AMDHD2Q9Y303 409 aa12.29□□□□□ -0.44
SMG8-201ENST00000300917 A0A0G2JRQ6 117 aa12.28□□□□□ -0.44
SMG8-201ENST00000300917 H7C1Q1 480 aa12.28□□□□□ -0.44
SMG8-201ENST00000300917 ATXN7O15265 892 aaPredicted RBP12.28□□□□□ -0.44
SMG8-201ENST00000300917 ST8SIA3O43173 380 aa12.28□□□□□ -0.44
SMG8-201ENST00000300917 GLIPR1P48060 266 aa12.28□□□□□ -0.44
SMG8-201ENST00000300917 IGFL3Q6UXB1 125 aa12.28□□□□□ -0.44
SMG8-201ENST00000300917 SELENOHQ8IZQ5 122 aaKnown RBP12.28□□□□□ -0.44
SMG8-201ENST00000300917 MUCL1Q96DR8 90 aa12.28□□□□□ -0.44
SMG8-201ENST00000300917 TUBD1Q9UJT1 453 aa12.28□□□□□ -0.44
SMG8-201ENST00000300917 CHD3Q12873 2000 aaKnown RBP12.28□□□□□ -0.44
SMG8-201ENST00000300917 CST7O76096 145 aa12.28□□□□□ -0.44
SMG8-201ENST00000300917 FAM87AP0C7U9 286 aa12.28□□□□□ -0.44
SMG8-201ENST00000300917 KCNJ3P48549 501 aa12.28□□□□□ -0.44
SMG8-201ENST00000300917 P2RY6Q15077 328 aa12.28□□□□□ -0.44
SMG8-201ENST00000300917 BPIFCQ8NFQ6 507 aa12.28□□□□□ -0.44
SMG8-201ENST00000300917 DNTTIP1Q9H147 329 aa12.28□□□□□ -0.44
SMG8-201ENST00000300917 CXXC4Q9H2H0 198 aa12.28□□□□□ -0.44
SMG8-201ENST00000300917 BARX1Q9HBU1 254 aaPredicted RBP12.28□□□□□ -0.44
SMG8-201ENST00000300917 MED6O75586 246 aa12.28□□□□□ -0.44
SMG8-201ENST00000300917 C1QL1O75973 258 aa12.28□□□□□ -0.44
SMG8-201ENST00000300917 CRYAAP02489 173 aa12.28□□□□□ -0.44
SMG8-201ENST00000300917 SERPINE2P07093 398 aa12.28□□□□□ -0.44
SMG8-201ENST00000300917 EGR1P18146 543 aa12.28□□□□□ -0.44
SMG8-201ENST00000300917 SSTR5P35346 364 aa12.28□□□□□ -0.44
SMG8-201ENST00000300917 COL10A1Q03692 680 aa12.28□□□□□ -0.44
SMG8-201ENST00000300917 ZNF497Q6ZNH5 498 aa12.28□□□□□ -0.44
SMG8-201ENST00000300917 SPACA3Q8IXA5 215 aa12.28□□□□□ -0.44
SMG8-201ENST00000300917 DEFB108BQ8NET1 73 aa12.28□□□□□ -0.44
SMG8-201ENST00000300917 FAM96BQ9Y3D0 163 aa12.28□□□□□ -0.44
SMG8-201ENST00000300917 FGF2P09038 288 aa12.27□□□□□ -0.45
SMG8-201ENST00000300917 NKX2-1P43699 371 aaPredicted RBP12.27□□□□□ -0.45
SMG8-201ENST00000300917 ATRAIDQ6UW56 229 aa12.27□□□□□ -0.45
SMG8-201ENST00000300917 BTNL3Q6UXE8 466 aa12.27□□□□□ -0.45
SMG8-201ENST00000300917 ZCCHC24Q8N2G6 241 aaKnown RBP12.27□□□□□ -0.45
SMG8-201ENST00000300917 OR4A4PQ8NGN8 299 aa12.27□□□□□ -0.45
SMG8-201ENST00000300917 WFDC1Q9HC57 220 aa12.27□□□□□ -0.45
SMG8-201ENST00000300917 IL2RGP31785 369 aa12.27□□□□□ -0.45
SMG8-201ENST00000300917 FHITP49789 147 aa12.27□□□□□ -0.45
SMG8-201ENST00000300917 RIMS4Q9H426 269 aaPredicted RBP12.27□□□□□ -0.45
SMG8-201ENST00000300917 CRYABP02511 175 aaKnown RBP12.26□□□□□ -0.45
SMG8-201ENST00000300917 PPP1CCP36873 323 aaKnown RBP12.26□□□□□ -0.45
SMG8-201ENST00000300917 HNF4GQ14541 408 aa12.26□□□□□ -0.45
SMG8-201ENST00000300917 TESK1Q15569 626 aa12.26□□□□□ -0.45
SMG8-201ENST00000300917 MOGAT3Q86VF5 341 aa12.26□□□□□ -0.45
SMG8-201ENST00000300917 Q8IYB0 196 aa12.26□□□□□ -0.45
SMG8-201ENST00000300917 H1FOOQ8IZA3 346 aaPredicted RBP12.26□□□□□ -0.45
SMG8-201ENST00000300917 C1orf162Q8NEQ5 155 aaPredicted RBP12.26□□□□□ -0.45
SMG8-201ENST00000300917 SH3BGRL3Q9H299 93 aa12.26□□□□□ -0.45
SMG8-201ENST00000300917 PLA2G2EQ9NZK7 142 aa12.26□□□□□ -0.45
SMG8-201ENST00000300917 DNAJB11Q9UBS4 358 aa12.26□□□□□ -0.45
SMG8-201ENST00000300917 ABCA4P78363 2273 aa12.26□□□□□ -0.45
SMG8-201ENST00000300917 A8MXK9 166 aa12.26□□□□□ -0.45
SMG8-201ENST00000300917 E5RGE8 158 aa12.26□□□□□ -0.45
SMG8-201ENST00000300917 TSPAN9O75954 239 aa12.26□□□□□ -0.45
SMG8-201ENST00000300917 CTXN2P0C2S0 81 aa12.26□□□□□ -0.45
SMG8-201ENST00000300917 LYL1P12980 280 aa12.26□□□□□ -0.45
SMG8-201ENST00000300917 SELLP14151 372 aa12.26□□□□□ -0.45
SMG8-201ENST00000300917 ACP7Q6ZNF0 438 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms