RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 PYY3Q5JQD4 70 aa10.99□□□□□ -0.65
HIF3A-204ENST00000300862 PCSK4Q6UW60 755 aa10.99□□□□□ -0.65
HIF3A-204ENST00000300862 C16orf54Q6UWD8 224 aa10.99□□□□□ -0.65
HIF3A-204ENST00000300862 DHRS13Q6UX07 377 aa10.99□□□□□ -0.65
HIF3A-204ENST00000300862 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.99□□□□□ -0.65
HIF3A-204ENST00000300862 TMEM252Q8N6L7 170 aa10.99□□□□□ -0.65
HIF3A-204ENST00000300862 OR5A2Q8NGI9 324 aa10.99□□□□□ -0.65
HIF3A-204ENST00000300862 OR2G3Q8NGZ4 309 aa10.99□□□□□ -0.65
HIF3A-204ENST00000300862 MRPL30Q8TCC3 161 aaKnown RBP10.99□□□□□ -0.65
HIF3A-204ENST00000300862 TOLLIPQ9H0E2 274 aa10.99□□□□□ -0.65
HIF3A-204ENST00000300862 ABI3Q9P2A4 366 aa10.99□□□□□ -0.65
HIF3A-204ENST00000300862 ATP23Q9Y6H3 246 aa10.99□□□□□ -0.65
HIF3A-204ENST00000300862 A0A0G2JRQ6 117 aa10.99□□□□□ -0.65
HIF3A-204ENST00000300862 FAM90A10PA6NDY2 464 aa10.99□□□□□ -0.65
HIF3A-204ENST00000300862 FAM90A18PA6NE21 464 aa10.99□□□□□ -0.65
HIF3A-204ENST00000300862 FAM90A16PA6NEW6 464 aa10.99□□□□□ -0.65
HIF3A-204ENST00000300862 FAM90A20PA6NIJ5 464 aa10.99□□□□□ -0.65
HIF3A-204ENST00000300862 FAM90A8PA6NJQ4 464 aa10.99□□□□□ -0.65
HIF3A-204ENST00000300862 FAM90A7PA6NKC0 464 aa10.99□□□□□ -0.65
HIF3A-204ENST00000300862 ANKRD30BLA7E2S9 258 aa10.99□□□□□ -0.65
HIF3A-204ENST00000300862 FAM90A22PA8MWA6 464 aa10.99□□□□□ -0.65
HIF3A-204ENST00000300862 FAM90A12PA8MX19 464 aa10.99□□□□□ -0.65
HIF3A-204ENST00000300862 FAM90A5PA8MXJ8 464 aa10.99□□□□□ -0.65
HIF3A-204ENST00000300862 FAM90A23PA8MXZ1 464 aa10.99□□□□□ -0.65
HIF3A-204ENST00000300862 H3BP45 60 aa10.99□□□□□ -0.65
HIF3A-204ENST00000300862 TUSC2O75896 110 aa10.99□□□□□ -0.65
HIF3A-204ENST00000300862 SLC34A2O95436 690 aa10.99□□□□□ -0.65
HIF3A-204ENST00000300862 IL18BPO95998 194 aa10.99□□□□□ -0.65
HIF3A-204ENST00000300862 FAM90A15PP0C7V4 464 aa10.99□□□□□ -0.65
HIF3A-204ENST00000300862 FAM90A13PP0C7W8 464 aa10.99□□□□□ -0.65
HIF3A-204ENST00000300862 FAM90A14PP0C7W9 464 aa10.99□□□□□ -0.65
HIF3A-204ENST00000300862 FAM90A24PP0C7X0 464 aa10.99□□□□□ -0.65
HIF3A-204ENST00000300862 RAC2P15153 192 aa10.99□□□□□ -0.65
HIF3A-204ENST00000300862 RUNX1Q01196 453 aa10.99□□□□□ -0.65
HIF3A-204ENST00000300862 MPV17LQ2QL34 196 aa10.99□□□□□ -0.65
HIF3A-204ENST00000300862 TMEM164Q5U3C3 297 aa10.99□□□□□ -0.65
HIF3A-204ENST00000300862 HEPN1Q6WQI6 88 aa10.99□□□□□ -0.65
HIF3A-204ENST00000300862 C1QL4Q86Z23 238 aa10.99□□□□□ -0.65
HIF3A-204ENST00000300862 ODF3L1Q8IXM7 274 aa10.99□□□□□ -0.65
HIF3A-204ENST00000300862 FAM185AQ8N0U4 392 aa10.99□□□□□ -0.65
HIF3A-204ENST00000300862 OR5C1Q8NGR4 320 aa10.99□□□□□ -0.65
HIF3A-204ENST00000300862 CHST1O43916 411 aa10.98□□□□□ -0.65
HIF3A-204ENST00000300862 SS18L1O75177 396 aaPredicted RBP10.98□□□□□ -0.65
HIF3A-204ENST00000300862 PGLYRP1O75594 196 aaPredicted RBP10.98□□□□□ -0.65
HIF3A-204ENST00000300862 APLNRP35414 380 aa10.98□□□□□ -0.65
HIF3A-204ENST00000300862 ARR3P36575 388 aa10.98□□□□□ -0.65
HIF3A-204ENST00000300862 RAB2AP61019 212 aa10.98□□□□□ -0.65
HIF3A-204ENST00000300862 VAMP2P63027 116 aa10.98□□□□□ -0.65
HIF3A-204ENST00000300862 SRPXP78539 464 aa10.98□□□□□ -0.65
HIF3A-204ENST00000300862 CLN3Q13286 438 aa10.98□□□□□ -0.65
HIF3A-204ENST00000300862 P4HA3Q7Z4N8 544 aa10.98□□□□□ -0.65
HIF3A-204ENST00000300862 MYPOPQ86VE0 399 aaPredicted RBP10.98□□□□□ -0.65
HIF3A-204ENST00000300862 SAXO1Q8IYX7 474 aa10.98□□□□□ -0.65
HIF3A-204ENST00000300862 OR1A1Q9P1Q5 309 aa10.98□□□□□ -0.65
HIF3A-204ENST00000300862 ERRFI1Q9UJM3 462 aaPredicted RBP10.98□□□□□ -0.65
HIF3A-204ENST00000300862 KIR2DS1A0A191URI9 304 aa10.98□□□□□ -0.65
HIF3A-204ENST00000300862 PCNX2A6NKB5 2137 aa10.98□□□□□ -0.65
HIF3A-204ENST00000300862 MT-CO3P00414 261 aa10.98□□□□□ -0.65
HIF3A-204ENST00000300862 SP1P08047 785 aa10.98□□□□□ -0.65
HIF3A-204ENST00000300862 CELA3BP08861 270 aa10.98□□□□□ -0.65
HIF3A-204ENST00000300862 COX5BP10606 129 aa10.98□□□□□ -0.65
HIF3A-204ENST00000300862 KIR2DS4P43632 304 aa10.98□□□□□ -0.65
HIF3A-204ENST00000300862 RAB5CP51148 216 aa10.98□□□□□ -0.65
HIF3A-204ENST00000300862 DYNLT3P51808 116 aa10.98□□□□□ -0.65
HIF3A-204ENST00000300862 KIR2DS1Q14954 304 aa10.98□□□□□ -0.65
HIF3A-204ENST00000300862 NMSQ5H8A3 153 aa10.98□□□□□ -0.65
HIF3A-204ENST00000300862 Q6ZS49 121 aa10.98□□□□□ -0.65
HIF3A-204ENST00000300862 MDP1Q86V88 176 aa10.98□□□□□ -0.65
HIF3A-204ENST00000300862 FAM58AQ8N1B3 248 aa10.98□□□□□ -0.65
HIF3A-204ENST00000300862 PLPPR1Q8TBJ4 325 aa10.98□□□□□ -0.65
HIF3A-204ENST00000300862 GPR87Q9BY21 358 aa10.98□□□□□ -0.65
HIF3A-204ENST00000300862 SLC35B3Q9H1N7 401 aa10.98□□□□□ -0.65
HIF3A-204ENST00000300862 KCNJ16Q9NPI9 418 aa10.98□□□□□ -0.65
HIF3A-204ENST00000300862 ARHGAP21Q5T5U3 1957 aa10.97□□□□□ -0.65
HIF3A-204ENST00000300862 TNRC6AQ8NDV7 1962 aaKnown RBP10.97□□□□□ -0.65
HIF3A-204ENST00000300862 K7N7A8 449 aa10.97□□□□□ -0.65
HIF3A-204ENST00000300862 CD59P13987 128 aa10.97□□□□□ -0.65
HIF3A-204ENST00000300862 SELEP16581 610 aa10.97□□□□□ -0.65
HIF3A-204ENST00000300862 HOXA5P20719 270 aa10.97□□□□□ -0.65
HIF3A-204ENST00000300862 UCP1P25874 307 aa10.97□□□□□ -0.65
HIF3A-204ENST00000300862 ZNF154Q13106 437 aa10.97□□□□□ -0.65
HIF3A-204ENST00000300862 KIAA0141Q14154 515 aaPredicted RBP10.97□□□□□ -0.65
HIF3A-204ENST00000300862 RNFT1Q5M7Z0 435 aa10.97□□□□□ -0.65
HIF3A-204ENST00000300862 BEND4Q6ZU67 534 aa10.97□□□□□ -0.65
HIF3A-204ENST00000300862 TMPRSS7Q7RTY8 843 aa10.97□□□□□ -0.65
HIF3A-204ENST00000300862 CMTM1Q8IZ96 169 aa10.97□□□□□ -0.65
HIF3A-204ENST00000300862 PLEKHF2Q9H8W4 249 aa10.97□□□□□ -0.65
HIF3A-204ENST00000300862 LYRM2Q9NU23 88 aaPredicted RBP10.97□□□□□ -0.65
HIF3A-204ENST00000300862 DLL3Q9NYJ7 618 aa10.97□□□□□ -0.65
HIF3A-204ENST00000300862 BOD1L1Q8NFC6 3051 aa10.97□□□□□ -0.65
HIF3A-204ENST00000300862 OR2C1O95371 312 aa10.97□□□□□ -0.65
HIF3A-204ENST00000300862 IFNA17P01571 189 aa10.97□□□□□ -0.65
HIF3A-204ENST00000300862 VDAC1P21796 283 aa10.97□□□□□ -0.65
HIF3A-204ENST00000300862 CEBPGP53567 150 aa10.97□□□□□ -0.65
HIF3A-204ENST00000300862 ERVS71-1P61550 626 aa10.97□□□□□ -0.65
HIF3A-204ENST00000300862 RND3P61587 244 aa10.97□□□□□ -0.65
HIF3A-204ENST00000300862 GNG3P63215 75 aa10.97□□□□□ -0.65
HIF3A-204ENST00000300862 HOXA4Q00056 320 aaPredicted RBP10.97□□□□□ -0.65
HIF3A-204ENST00000300862 OR10J5Q8NHC4 309 aa10.97□□□□□ -0.65
HIF3A-204ENST00000300862 SPIN2AQ99865 258 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms