RNA–Protein interactions for RNA: ENST00000297267.13

FNDC1-201, Transcript of fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC1, Length 6,552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-201ENST00000297267 SYNGR1O43759 233 aa13.46□□□□□ -0.26
FNDC1-201ENST00000297267 PRR31Q5SQ13 230 aa13.46□□□□□ -0.26
FNDC1-201ENST00000297267 FDX2Q6P4F2 183 aa13.46□□□□□ -0.26
FNDC1-201ENST00000297267 TMEM108Q6UXF1 575 aa13.46□□□□□ -0.26
FNDC1-201ENST00000297267 RABAC1Q9UI14 185 aa13.46□□□□□ -0.26
FNDC1-201ENST00000297267 KCNK7Q9Y2U2 307 aa13.46□□□□□ -0.26
FNDC1-201ENST00000297267 NPAS1Q99742 590 aa13.45□□□□□ -0.26
FNDC1-201ENST00000297267 GDF9O60383 454 aa13.45□□□□□ -0.26
FNDC1-201ENST00000297267 TFF1P04155 84 aa13.45□□□□□ -0.26
FNDC1-201ENST00000297267 KIR2DL1P43626 348 aaPredicted RBP13.45□□□□□ -0.26
FNDC1-201ENST00000297267 ZFP36L2P47974 494 aaKnown RBP13.45□□□□□ -0.26
FNDC1-201ENST00000297267 WDR34Q96EX3 536 aa13.45□□□□□ -0.26
FNDC1-201ENST00000297267 A0A1W2PQF6 199 aa13.45□□□□□ -0.26
FNDC1-201ENST00000297267 M0R296 226 aa13.45□□□□□ -0.26
FNDC1-201ENST00000297267 SYNGR2O43760 224 aa13.45□□□□□ -0.26
FNDC1-201ENST00000297267 CLDN14O95500 239 aa13.45□□□□□ -0.26
FNDC1-201ENST00000297267 MUC21A0A0G2JKD1 596 aa13.45□□□□□ -0.26
FNDC1-201ENST00000297267 MUC21A0A140T8X8 626 aa13.45□□□□□ -0.26
FNDC1-201ENST00000297267 ZNF25P17030 456 aaPredicted RBP13.45□□□□□ -0.26
FNDC1-201ENST00000297267 HLA-DRB5Q30154 266 aa13.45□□□□□ -0.26
FNDC1-201ENST00000297267 MUC21Q5SSG8 566 aa13.45□□□□□ -0.26
FNDC1-201ENST00000297267 OR51B2Q9Y5P1 312 aa13.45□□□□□ -0.26
FNDC1-201ENST00000297267 CLDN34H7C241 214 aa13.45□□□□□ -0.26
FNDC1-201ENST00000297267 ACP1P24666 158 aa13.45□□□□□ -0.26
FNDC1-201ENST00000297267 SRD5A2P31213 254 aa13.45□□□□□ -0.26
FNDC1-201ENST00000297267 RPL13AP40429 203 aaKnown RBP13.45□□□□□ -0.26
FNDC1-201ENST00000297267 IL13RA2Q14627 380 aa13.45□□□□□ -0.26
FNDC1-201ENST00000297267 ZNF343Q6P1L6 599 aa13.45□□□□□ -0.26
FNDC1-201ENST00000297267 SLC25A42Q86VD7 318 aa13.45□□□□□ -0.26
FNDC1-201ENST00000297267 PHYHIPLQ96FC7 376 aa13.45□□□□□ -0.26
FNDC1-201ENST00000297267 RAB40CQ96S21 281 aa13.45□□□□□ -0.26
FNDC1-201ENST00000297267 TEX50A0A1B0GTY4 177 aa13.44□□□□□ -0.26
FNDC1-201ENST00000297267 SNURFLB1AK76 121 aa13.44□□□□□ -0.26
FNDC1-201ENST00000297267 CRHP06850 196 aa13.44□□□□□ -0.26
FNDC1-201ENST00000297267 COMPP49747 757 aaPredicted RBP13.44□□□□□ -0.26
FNDC1-201ENST00000297267 UQCC3Q6UW78 93 aa13.44□□□□□ -0.26
FNDC1-201ENST00000297267 NKX2-8O15522 239 aa13.44□□□□□ -0.26
FNDC1-201ENST00000297267 CST2P09228 141 aa13.44□□□□□ -0.26
FNDC1-201ENST00000297267 MUC1P15941 1255 aaPredicted RBP13.44□□□□□ -0.26
FNDC1-201ENST00000297267 TRAV17A0A0B4J275 112 aa13.44□□□□□ -0.26
FNDC1-201ENST00000297267 TMEM218A2RU14 115 aa13.44□□□□□ -0.26
FNDC1-201ENST00000297267 ZNF716A6NP11 495 aa13.44□□□□□ -0.26
FNDC1-201ENST00000297267 SLC45A2Q9UMX9 530 aa13.44□□□□□ -0.26
FNDC1-201ENST00000297267 C7orf77A4D0Y5 90 aa13.44□□□□□ -0.26
FNDC1-201ENST00000297267 IGHV4-34P06331 123 aa13.44□□□□□ -0.26
FNDC1-201ENST00000297267 NMUP48645 174 aa13.44□□□□□ -0.26
FNDC1-201ENST00000297267 TMEM116Q8NCL8 245 aa13.44□□□□□ -0.26
FNDC1-201ENST00000297267 HARBI1Q96MB7 349 aa13.44□□□□□ -0.26
FNDC1-201ENST00000297267 ZPBPQ9BS86 351 aa13.44□□□□□ -0.26
FNDC1-201ENST00000297267 OR4A8P0C604 315 aa13.44□□□□□ -0.26
FNDC1-201ENST00000297267 CRISP2P16562 243 aa13.44□□□□□ -0.26
FNDC1-201ENST00000297267 SSBP1Q04837 148 aaKnown RBP13.44□□□□□ -0.26
FNDC1-201ENST00000297267 IGFBP7Q16270 282 aa13.44□□□□□ -0.26
FNDC1-201ENST00000297267 TBX15Q96SF7 602 aa13.44□□□□□ -0.26
FNDC1-201ENST00000297267 MTCL1Q9Y4B5 1905 aaKnown RBP13.43□□□□□ -0.26
FNDC1-201ENST00000297267 MFNGO00587 321 aa13.43□□□□□ -0.26
FNDC1-201ENST00000297267 FHITP49789 147 aa13.43□□□□□ -0.26
FNDC1-201ENST00000297267 RPL24P83731 157 aaKnown RBP13.43□□□□□ -0.26
FNDC1-201ENST00000297267 TMEM183BQ1AE95 376 aa13.43□□□□□ -0.26
FNDC1-201ENST00000297267 GAB4Q2WGN9 574 aa13.43□□□□□ -0.26
FNDC1-201ENST00000297267 C10orf113Q5VZT2 155 aa13.43□□□□□ -0.26
FNDC1-201ENST00000297267 P2RX4Q99571 388 aa13.43□□□□□ -0.26
FNDC1-201ENST00000297267 C5orf52A6NGY3 159 aa13.43□□□□□ -0.26
FNDC1-201ENST00000297267 ZNF253O75346 499 aa13.43□□□□□ -0.26
FNDC1-201ENST00000297267 PGA3P0DJD8 388 aa13.43□□□□□ -0.26
FNDC1-201ENST00000297267 RPS4Y1P22090 263 aaKnown RBP13.43□□□□□ -0.26
FNDC1-201ENST00000297267 PRRX1P54821 245 aa13.43□□□□□ -0.26
FNDC1-201ENST00000297267 GABRA6Q16445 453 aa13.43□□□□□ -0.26
FNDC1-201ENST00000297267 ERASQ7Z444 233 aa13.43□□□□□ -0.26
FNDC1-201ENST00000297267 CYB561D1Q8N8Q1 229 aa13.43□□□□□ -0.26
FNDC1-201ENST00000297267 PRSS27Q9BQR3 290 aa13.43□□□□□ -0.26
FNDC1-201ENST00000297267 NAT8Q9UHE5 227 aa13.43□□□□□ -0.26
FNDC1-201ENST00000297267 TCF21O43680 179 aa13.43□□□□□ -0.26
FNDC1-201ENST00000297267 RHBDD2Q6NTF9 364 aa13.43□□□□□ -0.26
FNDC1-201ENST00000297267 IGKV3-20P01619 116 aa13.43□□□□□ -0.26
FNDC1-201ENST00000297267 CRYABP02511 175 aaKnown RBP13.43□□□□□ -0.26
FNDC1-201ENST00000297267 PEAR1Q5VY43 1037 aaPredicted RBP13.43□□□□□ -0.26
FNDC1-201ENST00000297267 LHFPL4Q7Z7J7 247 aa13.43□□□□□ -0.26
FNDC1-201ENST00000297267 TMEM38BQ9NVV0 291 aa13.43□□□□□ -0.26
FNDC1-201ENST00000297267 HAX1O00165 279 aa13.43□□□□□ -0.26
FNDC1-201ENST00000297267 GNG7O60262 68 aa13.43□□□□□ -0.26
FNDC1-201ENST00000297267 CFDP00746 253 aaPredicted RBP13.43□□□□□ -0.26
FNDC1-201ENST00000297267 PSG4Q00888 419 aa13.43□□□□□ -0.26
FNDC1-201ENST00000297267 LY6EQ16553 131 aa13.43□□□□□ -0.26
FNDC1-201ENST00000297267 BSXQ3C1V8 233 aa13.43□□□□□ -0.26
FNDC1-201ENST00000297267 CES1P1Q9UKY3 287 aa13.43□□□□□ -0.26
FNDC1-201ENST00000297267 AP4M1O00189 453 aa13.42□□□□□ -0.26
FNDC1-201ENST00000297267 APCSP02743 223 aa13.42□□□□□ -0.26
FNDC1-201ENST00000297267 LIFP15018 202 aa13.42□□□□□ -0.26
FNDC1-201ENST00000297267 FAM74A7A6NL05 159 aa13.42□□□□□ -0.26
FNDC1-201ENST00000297267 OR4C45A6NMZ5 311 aa13.42□□□□□ -0.26
FNDC1-201ENST00000297267 M0QZ24 198 aa13.42□□□□□ -0.26
FNDC1-201ENST00000297267 S100A8P05109 93 aa13.42□□□□□ -0.26
FNDC1-201ENST00000297267 EGR1P18146 543 aa13.42□□□□□ -0.26
FNDC1-201ENST00000297267 FAM74A3Q4VXF1 159 aa13.42□□□□□ -0.26
FNDC1-201ENST00000297267 SMIM12Q96EX1 92 aa13.42□□□□□ -0.26
FNDC1-201ENST00000297267 NEIL1Q96FI4 390 aaPredicted RBP13.42□□□□□ -0.26
FNDC1-201ENST00000297267 SEBOXQ9HB31 216 aaPredicted RBP13.42□□□□□ -0.26
FNDC1-201ENST00000297267 IGKV3OR2-268A0A0C4DH90 116 aa13.42□□□□□ -0.26
FNDC1-201ENST00000297267 ATP6V0CP27449 155 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms