RNA–Protein interactions for RNA: ENST00000274030.10

USP53-201, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP53, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-201ENST00000274030 PMS2CLQ68D20 193 aa9.98□□□□□ -0.81
USP53-201ENST00000274030 SNX22Q96L94 193 aa9.98□□□□□ -0.81
USP53-201ENST00000274030 AMELYQ99218 206 aa9.98□□□□□ -0.81
USP53-201ENST00000274030 SLC25A10Q9UBX3 287 aaPredicted RBP9.98□□□□□ -0.81
USP53-201ENST00000274030 IGSF11Q5DX21 431 aa9.98□□□□□ -0.81
USP53-201ENST00000274030 SIGIRRQ6IA17 410 aa9.98□□□□□ -0.81
USP53-201ENST00000274030 C9orf62Q8N4C0 152 aa9.98□□□□□ -0.81
USP53-201ENST00000274030 NPAS1Q99742 590 aa9.98□□□□□ -0.81
USP53-201ENST00000274030 HILPDAQ9Y5L2 63 aa9.98□□□□□ -0.81
USP53-201ENST00000274030 ZDBF2Q9HCK1 2354 aa9.98□□□□□ -0.81
USP53-201ENST00000274030 PRSS53Q2L4Q9 553 aa9.98□□□□□ -0.81
USP53-201ENST00000274030 SLC35E4Q6ICL7 350 aa9.98□□□□□ -0.81
USP53-201ENST00000274030 ZNF826PQ6ZT77 177 aa9.98□□□□□ -0.81
USP53-201ENST00000274030 TMEM251Q8N6I4 163 aa9.98□□□□□ -0.81
USP53-201ENST00000274030 TMEM116Q8NCL8 245 aa9.98□□□□□ -0.81
USP53-201ENST00000274030 ABHD14BQ96IU4 210 aa9.98□□□□□ -0.81
USP53-201ENST00000274030 J3QR06 171 aa9.98□□□□□ -0.81
USP53-201ENST00000274030 CRXO43186 299 aaPredicted RBP9.98□□□□□ -0.81
USP53-201ENST00000274030 P01737 135 aa9.98□□□□□ -0.81
USP53-201ENST00000274030 NPY1RP25929 384 aa9.98□□□□□ -0.81
USP53-201ENST00000274030 PRDX2P32119 198 aa9.98□□□□□ -0.81
USP53-201ENST00000274030 ZNF137PP52743 207 aa9.98□□□□□ -0.81
USP53-201ENST00000274030 OR5R1Q8NH85 324 aa9.98□□□□□ -0.81
USP53-201ENST00000274030 ZNF519Q8TB69 540 aa9.98□□□□□ -0.81
USP53-201ENST00000274030 HSF4Q9ULV5 492 aa9.98□□□□□ -0.81
USP53-201ENST00000274030 ALPK2Q86TB3 2170 aa9.98□□□□□ -0.81
USP53-201ENST00000274030 DNPH1O43598 174 aa9.98□□□□□ -0.81
USP53-201ENST00000274030 RHBDL1O75783 438 aa9.98□□□□□ -0.81
USP53-201ENST00000274030 SULT1A1P50225 295 aa9.98□□□□□ -0.81
USP53-201ENST00000274030 C10orf113Q5VZT2 155 aa9.98□□□□□ -0.81
USP53-201ENST00000274030 OR2D3Q8NGH3 330 aa9.98□□□□□ -0.81
USP53-201ENST00000274030 Q8WTZ3 238 aa9.98□□□□□ -0.81
USP53-201ENST00000274030 GPHA2Q96T91 129 aa9.98□□□□□ -0.81
USP53-201ENST00000274030 C1RLQ9NZP8 487 aa9.98□□□□□ -0.81
USP53-201ENST00000274030 ADAMTSL1Q8N6G6 1762 aa9.97□□□□□ -0.81
USP53-201ENST00000274030 LMX1BO60663 402 aa9.97□□□□□ -0.81
USP53-201ENST00000274030 TCTAP57738 103 aa9.97□□□□□ -0.81
USP53-201ENST00000274030 FDX2Q6P4F2 183 aa9.97□□□□□ -0.81
USP53-201ENST00000274030 SLC35E3Q7Z769 313 aa9.97□□□□□ -0.81
USP53-201ENST00000274030 SLC25A45Q8N413 288 aa9.97□□□□□ -0.81
USP53-201ENST00000274030 KCNK7Q9Y2U2 307 aa9.97□□□□□ -0.81
USP53-201ENST00000274030 PCDHGA9Q9Y5G4 932 aaKnown RBP9.97□□□□□ -0.81
USP53-201ENST00000274030 MGPP08493 103 aa9.97□□□□□ -0.81
USP53-201ENST00000274030 RUNX1Q01196 453 aa9.97□□□□□ -0.81
USP53-201ENST00000274030 OR10C1Q96KK4 312 aa9.97□□□□□ -0.81
USP53-201ENST00000274030 MANBALQ9NQG1 85 aa9.97□□□□□ -0.81
USP53-201ENST00000274030 PPIAL4EA0A075B759 164 aa9.97□□□□□ -0.81
USP53-201ENST00000274030 LEUTXA8MZ59 168 aa9.97□□□□□ -0.81
USP53-201ENST00000274030 PPIAL4DF5H284 164 aa9.97□□□□□ -0.81
USP53-201ENST00000274030 F12P00748 615 aaPredicted RBP9.97□□□□□ -0.81
USP53-201ENST00000274030 PPIAL4FP0DN26 164 aa9.97□□□□□ -0.81
USP53-201ENST00000274030 RBM11P57052 281 aaKnown RBP9.97□□□□□ -0.81
USP53-201ENST00000274030 C19orf57Q0VDD7 668 aa9.97□□□□□ -0.81
USP53-201ENST00000274030 ANKRD55Q3KP44 614 aa9.97□□□□□ -0.81
USP53-201ENST00000274030 Q9N2K0 584 aa9.97□□□□□ -0.81
USP53-201ENST00000274030 WIPI2Q9Y4P8 454 aa9.97□□□□□ -0.81
USP53-201ENST00000274030 PPIAL4AQ9Y536 164 aa9.97□□□□□ -0.81
USP53-201ENST00000274030 DOCK5Q9H7D0 1870 aa9.97□□□□□ -0.81
USP53-201ENST00000274030 ASAH2BP0C7U1 165 aa9.97□□□□□ -0.81
USP53-201ENST00000274030 TMEM97Q5BJF2 176 aa9.97□□□□□ -0.81
USP53-201ENST00000274030 TMEM255AQ5JRV8 349 aa9.97□□□□□ -0.81
USP53-201ENST00000274030 STPG1Q5TH74 334 aa9.97□□□□□ -0.81
USP53-201ENST00000274030 BVESQ8NE79 360 aa9.97□□□□□ -0.81
USP53-201ENST00000274030 PIPOXQ9P0Z9 390 aa9.97□□□□□ -0.81
USP53-201ENST00000274030 PRNDQ9UKY0 176 aa9.97□□□□□ -0.81
USP53-201ENST00000274030 FUT9Q9Y231 359 aa9.97□□□□□ -0.81
USP53-201ENST00000274030 C7orf77A4D0Y5 90 aa9.97□□□□□ -0.81
USP53-201ENST00000274030 SRSF10O75494 262 aaKnown RBP9.97□□□□□ -0.81
USP53-201ENST00000274030 CEBPDP49716 269 aaPredicted RBP9.97□□□□□ -0.81
USP53-201ENST00000274030 TMEM183BQ1AE95 376 aa9.97□□□□□ -0.81
USP53-201ENST00000274030 SP7Q8TDD2 431 aaPredicted RBP9.97□□□□□ -0.81
USP53-201ENST00000274030 SEC11CQ9BY50 192 aa9.97□□□□□ -0.81
USP53-201ENST00000274030 VAX2Q9UIW0 290 aa9.97□□□□□ -0.81
USP53-201ENST00000274030 HELTA6NFD8 242 aa9.96□□□□□ -0.81
USP53-201ENST00000274030 OR2T8A6NH00 312 aa9.96□□□□□ -0.81
USP53-201ENST00000274030 MELTFP08582 738 aa9.96□□□□□ -0.81
USP53-201ENST00000274030 ADRA2AP08913 450 aa9.96□□□□□ -0.81
USP53-201ENST00000274030 MDKP21741 143 aaPredicted RBP9.96□□□□□ -0.81
USP53-201ENST00000274030 LDLRAD3Q86YD5 345 aa9.96□□□□□ -0.81
USP53-201ENST00000274030 TCTEX1D1Q8N7M0 179 aa9.96□□□□□ -0.81
USP53-201ENST00000274030 OR1L6Q8NGR2 347 aa9.96□□□□□ -0.81
USP53-201ENST00000274030 CYB5R1Q9UHQ9 305 aa9.96□□□□□ -0.81
USP53-201ENST00000274030 TDRD6O60522 2096 aaKnown RBP9.96□□□□□ -0.81
USP53-201ENST00000274030 WISP3O95389 354 aaPredicted RBP9.96□□□□□ -0.81
USP53-201ENST00000274030 ATP6V0CP27449 155 aa9.96□□□□□ -0.81
USP53-201ENST00000274030 EIF4EBP2Q13542 120 aaPredicted RBP9.96□□□□□ -0.81
USP53-201ENST00000274030 A0A1W2PPC1 479 aa9.96□□□□□ -0.82
USP53-201ENST00000274030 NPIPB8E9PQR5 432 aa9.96□□□□□ -0.82
USP53-201ENST00000274030 MBPP02686 304 aaPredicted RBP9.96□□□□□ -0.82
USP53-201ENST00000274030 FCGR3AP08637 254 aa9.96□□□□□ -0.82
USP53-201ENST00000274030 ATP1A1-AS1Q5TC04 95 aa9.96□□□□□ -0.82
USP53-201ENST00000274030 C19orf35Q6ZS72 473 aa9.96□□□□□ -0.82
USP53-201ENST00000274030 HOGA1Q86XE5 327 aa9.96□□□□□ -0.82
USP53-201ENST00000274030 OR51B2Q9Y5P1 312 aa9.96□□□□□ -0.82
USP53-201ENST00000274030 ATXN7O15265 892 aaPredicted RBP9.96□□□□□ -0.82
USP53-201ENST00000274030 SEMA7AO75326 666 aa9.96□□□□□ -0.82
USP53-201ENST00000274030 IER3P46695 156 aa9.96□□□□□ -0.82
USP53-201ENST00000274030 TFPI2P48307 235 aa9.96□□□□□ -0.82
USP53-201ENST00000274030 UCP2P55851 309 aa9.96□□□□□ -0.82
USP53-201ENST00000274030 FUT5Q11128 374 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms