RNA–Protein interactions for RNA: ENST00000269485.11

TNFRSF11A-201, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-201ENST00000269485 TMEM182Q6ZP80 229 aaPredicted RBP12.2□□□□□ -0.46
TNFRSF11A-201ENST00000269485 LOC102723996A0A087X1L8 192 aa12.19□□□□□ -0.46
TNFRSF11A-201ENST00000269485 BORCS7-ASMTA0A0B4J1R7 106 aa12.19□□□□□ -0.46
TNFRSF11A-201ENST00000269485 M0R1B8 84 aa12.19□□□□□ -0.46
TNFRSF11A-201ENST00000269485 TIMM8AO60220 97 aaPredicted RBP12.19□□□□□ -0.46
TNFRSF11A-201ENST00000269485 NXPH2O95156 264 aa12.19□□□□□ -0.46
TNFRSF11A-201ENST00000269485 CRHP06850 196 aa12.19□□□□□ -0.46
TNFRSF11A-201ENST00000269485 MMP9P14780 707 aa12.19□□□□□ -0.46
TNFRSF11A-201ENST00000269485 PTTG1IPP53801 180 aa12.19□□□□□ -0.46
TNFRSF11A-201ENST00000269485 TMEM37Q8WXS4 190 aa12.19□□□□□ -0.46
TNFRSF11A-201ENST00000269485 EMG1Q92979 244 aaKnown RBP12.19□□□□□ -0.46
TNFRSF11A-201ENST00000269485 MRPL13Q9BYD1 178 aaKnown RBP12.19□□□□□ -0.46
TNFRSF11A-201ENST00000269485 TMEM38BQ9NVV0 291 aa12.19□□□□□ -0.46
TNFRSF11A-201ENST00000269485 PPP1R3CQ9UQK1 317 aa12.19□□□□□ -0.46
TNFRSF11A-201ENST00000269485 RFNGQ9Y644 331 aa12.19□□□□□ -0.46
TNFRSF11A-201ENST00000269485 TNCP24821 2201 aa12.19□□□□□ -0.46
TNFRSF11A-201ENST00000269485 A0A1B0GTI1 187 aa12.19□□□□□ -0.46
TNFRSF11A-201ENST00000269485 ANKRD30BLA7E2S9 258 aa12.19□□□□□ -0.46
TNFRSF11A-201ENST00000269485 TRGC1P0CF51 173 aa12.19□□□□□ -0.46
TNFRSF11A-201ENST00000269485 OR5H8P0DN80 308 aa12.19□□□□□ -0.46
TNFRSF11A-201ENST00000269485 ZNF345Q14585 488 aa12.19□□□□□ -0.46
TNFRSF11A-201ENST00000269485 MST1LQ2TV78 715 aa12.19□□□□□ -0.46
TNFRSF11A-201ENST00000269485 LBHQ53QV2 105 aaPredicted RBP12.19□□□□□ -0.46
TNFRSF11A-201ENST00000269485 PRRT1Q99946 306 aa12.19□□□□□ -0.46
TNFRSF11A-201ENST00000269485 SYT3Q9BQG1 590 aa12.19□□□□□ -0.46
TNFRSF11A-201ENST00000269485 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.19□□□□□ -0.46
TNFRSF11A-201ENST00000269485 ETV7Q9Y603 341 aa12.19□□□□□ -0.46
TNFRSF11A-201ENST00000269485 C9orf170A2RU37 121 aa12.19□□□□□ -0.46
TNFRSF11A-201ENST00000269485 CXCL1P09341 107 aa12.19□□□□□ -0.46
TNFRSF11A-201ENST00000269485 PET100P0DJ07 73 aa12.19□□□□□ -0.46
TNFRSF11A-201ENST00000269485 IAH1Q2TAA2 248 aaPredicted RBP12.19□□□□□ -0.46
TNFRSF11A-201ENST00000269485 ARSJQ5FYB0 599 aaPredicted RBP12.19□□□□□ -0.46
TNFRSF11A-201ENST00000269485 MDP1Q86V88 176 aa12.19□□□□□ -0.46
TNFRSF11A-201ENST00000269485 OR10J5Q8NHC4 309 aa12.19□□□□□ -0.46
TNFRSF11A-201ENST00000269485 OR2H1Q9GZK4 316 aa12.19□□□□□ -0.46
TNFRSF11A-201ENST00000269485 LPAR5Q9H1C0 372 aa12.19□□□□□ -0.46
TNFRSF11A-201ENST00000269485 WNK1Q9H4A3 2382 aa12.19□□□□□ -0.46
TNFRSF11A-201ENST00000269485 H0YL77 283 aa12.18□□□□□ -0.46
TNFRSF11A-201ENST00000269485 SPRY3O43610 288 aa12.18□□□□□ -0.46
TNFRSF11A-201ENST00000269485 PTBP3O95758 552 aaKnown RBP12.18□□□□□ -0.46
TNFRSF11A-201ENST00000269485 RPLP1P05386 114 aaKnown RBP12.18□□□□□ -0.46
TNFRSF11A-201ENST00000269485 FOLR2P14207 255 aa12.18□□□□□ -0.46
TNFRSF11A-201ENST00000269485 CD33P20138 364 aa12.18□□□□□ -0.46
TNFRSF11A-201ENST00000269485 PMS2P11Q13670 270 aa12.18□□□□□ -0.46
TNFRSF11A-201ENST00000269485 MKXQ8IYA7 352 aa12.18□□□□□ -0.46
TNFRSF11A-201ENST00000269485 ZNF664Q8N3J9 261 aa12.18□□□□□ -0.46
TNFRSF11A-201ENST00000269485 FADS6Q8N9I5 356 aa12.18□□□□□ -0.46
TNFRSF11A-201ENST00000269485 OR10V1Q8NGI7 309 aa12.18□□□□□ -0.46
TNFRSF11A-201ENST00000269485 TMEM208Q9BTX3 173 aa12.18□□□□□ -0.46
TNFRSF11A-201ENST00000269485 NDUFAF3Q9BU61 184 aa12.18□□□□□ -0.46
TNFRSF11A-201ENST00000269485 PPIAL4AQ9Y536 164 aa12.18□□□□□ -0.46
TNFRSF11A-201ENST00000269485 PKD1L2Q7Z442 2459 aa12.18□□□□□ -0.46
TNFRSF11A-201ENST00000269485 ZNF503-AS2A6NEH8 195 aa12.18□□□□□ -0.46
TNFRSF11A-201ENST00000269485 DHRS7CA6NNS2 312 aa12.18□□□□□ -0.46
TNFRSF11A-201ENST00000269485 HIST1H2BKO60814 126 aa12.18□□□□□ -0.46
TNFRSF11A-201ENST00000269485 HIST1H2BJP06899 126 aa12.18□□□□□ -0.46
TNFRSF11A-201ENST00000269485 CST2P09228 141 aa12.18□□□□□ -0.46
TNFRSF11A-201ENST00000269485 BCL3P20749 454 aa12.18□□□□□ -0.46
TNFRSF11A-201ENST00000269485 HIST1H2BOP23527 126 aa12.18□□□□□ -0.46
TNFRSF11A-201ENST00000269485 HIST1H2BBP33778 126 aa12.18□□□□□ -0.46
TNFRSF11A-201ENST00000269485 TMEM50BP56557 158 aa12.18□□□□□ -0.46
TNFRSF11A-201ENST00000269485 HIST1H2BDP58876 126 aa12.18□□□□□ -0.46
TNFRSF11A-201ENST00000269485 HIST1H2BCP62807 126 aa12.18□□□□□ -0.46
TNFRSF11A-201ENST00000269485 FOXF2Q12947 444 aa12.18□□□□□ -0.46
TNFRSF11A-201ENST00000269485 PRDX4Q13162 271 aa12.18□□□□□ -0.46
TNFRSF11A-201ENST00000269485 HIST2H2BEQ16778 126 aa12.18□□□□□ -0.46
TNFRSF11A-201ENST00000269485 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.18□□□□□ -0.46
TNFRSF11A-201ENST00000269485 FAM53AQ6NSI3 398 aaPredicted RBP12.18□□□□□ -0.46
TNFRSF11A-201ENST00000269485 ERASQ7Z444 233 aa12.18□□□□□ -0.46
TNFRSF11A-201ENST00000269485 WFDC8Q8IUA0 241 aa12.18□□□□□ -0.46
TNFRSF11A-201ENST00000269485 FRZBQ92765 325 aa12.18□□□□□ -0.46
TNFRSF11A-201ENST00000269485 HIST1H2BHQ93079 126 aa12.18□□□□□ -0.46
TNFRSF11A-201ENST00000269485 HIST1H2BNQ99877 126 aa12.18□□□□□ -0.46
TNFRSF11A-201ENST00000269485 HIST1H2BMQ99879 126 aa12.18□□□□□ -0.46
TNFRSF11A-201ENST00000269485 NIPSNAP3BQ9BS92 247 aa12.18□□□□□ -0.46
TNFRSF11A-201ENST00000269485 H0YIZ8 118 aa12.18□□□□□ -0.46
TNFRSF11A-201ENST00000269485 RHBDL1O75783 438 aa12.18□□□□□ -0.46
TNFRSF11A-201ENST00000269485 PRAMEF6Q5VXH4 476 aa12.18□□□□□ -0.46
TNFRSF11A-201ENST00000269485 ZNF880Q6PDB4 577 aa12.18□□□□□ -0.46
TNFRSF11A-201ENST00000269485 BTNL3Q6UXE8 466 aa12.18□□□□□ -0.46
TNFRSF11A-201ENST00000269485 TMEM123Q8N131 208 aa12.18□□□□□ -0.46
TNFRSF11A-201ENST00000269485 ZFP62Q8NB50 900 aaPredicted RBP12.18□□□□□ -0.46
TNFRSF11A-201ENST00000269485 TMEM178AQ8NBL3 297 aa12.18□□□□□ -0.46
TNFRSF11A-201ENST00000269485 TRAPPC2LQ9UL33 140 aa12.18□□□□□ -0.46
TNFRSF11A-201ENST00000269485 KLF13Q9Y2Y9 288 aaPredicted RBP12.18□□□□□ -0.46
TNFRSF11A-201ENST00000269485 K7EM74 188 aa12.17□□□□□ -0.46
TNFRSF11A-201ENST00000269485 TUSC2O75896 110 aa12.17□□□□□ -0.46
TNFRSF11A-201ENST00000269485 HIST1H1DP16402 221 aaKnown RBP12.17□□□□□ -0.46
TNFRSF11A-201ENST00000269485 RPS23P62266 143 aaKnown RBP12.17□□□□□ -0.46
TNFRSF11A-201ENST00000269485 ROM1Q03395 351 aa12.17□□□□□ -0.46
TNFRSF11A-201ENST00000269485 FAM210BQ96KR6 192 aa12.17□□□□□ -0.46
TNFRSF11A-201ENST00000269485 GPR87Q9BY21 358 aa12.17□□□□□ -0.46
TNFRSF11A-201ENST00000269485 TRBV5-7A0A0A0MS05 114 aa12.17□□□□□ -0.46
TNFRSF11A-201ENST00000269485 TRAV34A0A0B4J273 112 aa12.17□□□□□ -0.46
TNFRSF11A-201ENST00000269485 HPNP05981 417 aa12.17□□□□□ -0.46
TNFRSF11A-201ENST00000269485 SLC35B3Q9H1N7 401 aa12.17□□□□□ -0.46
TNFRSF11A-201ENST00000269485 A0A0A6YYD4 124 aa12.17□□□□□ -0.46
TNFRSF11A-201ENST00000269485 ZNF724A8MTY0 619 aa12.17□□□□□ -0.46
TNFRSF11A-201ENST00000269485 CDRT15L2A8MXV6 281 aa12.17□□□□□ -0.46
TNFRSF11A-201ENST00000269485 ONECUT2O95948 504 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms