RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 HRASP01112 189 aa7.56□□□□□ -1.2
VAPB-201ENST00000265619 CTSDP07339 412 aaPredicted RBP7.56□□□□□ -1.2
VAPB-201ENST00000265619 PSG1P11464 419 aa7.56□□□□□ -1.2
VAPB-201ENST00000265619 OR1D4P47884 311 aa7.56□□□□□ -1.2
VAPB-201ENST00000265619 BIDP55957 195 aa7.56□□□□□ -1.2
VAPB-201ENST00000265619 YPEL5P62699 121 aa7.56□□□□□ -1.2
VAPB-201ENST00000265619 TMEM183BQ1AE95 376 aa7.56□□□□□ -1.2
VAPB-201ENST00000265619 TMEM241Q24JQ0 296 aa7.56□□□□□ -1.2
VAPB-201ENST00000265619 BSXQ3C1V8 233 aa7.56□□□□□ -1.2
VAPB-201ENST00000265619 ZNF787Q6DD87 383 aa7.56□□□□□ -1.2
VAPB-201ENST00000265619 TGIF2LYQ8IUE0 185 aa7.56□□□□□ -1.2
VAPB-201ENST00000265619 ATOH7Q8N100 152 aa7.56□□□□□ -1.2
VAPB-201ENST00000265619 OR51T1Q8NGJ9 327 aa7.56□□□□□ -1.2
VAPB-201ENST00000265619 RTN4IP1Q8WWV3 396 aaPredicted RBP7.56□□□□□ -1.2
VAPB-201ENST00000265619 MOB3AQ96BX8 217 aa7.56□□□□□ -1.2
VAPB-201ENST00000265619 RBMXL1Q96E39 390 aaKnown RBP7.56□□□□□ -1.2
VAPB-201ENST00000265619 ZNF552Q9H707 407 aaPredicted RBP7.56□□□□□ -1.2
VAPB-201ENST00000265619 FREM2Q5SZK8 3169 aa7.56□□□□□ -1.2
VAPB-201ENST00000265619 IGHV2-70DA0A0C4DH43 119 aa7.56□□□□□ -1.2
VAPB-201ENST00000265619 MAP1LC3B2A6NCE7 125 aa7.56□□□□□ -1.2
VAPB-201ENST00000265619 ZNF732B4DXR9 585 aa7.56□□□□□ -1.2
VAPB-201ENST00000265619 GDF9O60383 454 aa7.56□□□□□ -1.2
VAPB-201ENST00000265619 SERF1AO75920 110 aa7.56□□□□□ -1.2
VAPB-201ENST00000265619 ISG15P05161 165 aa7.56□□□□□ -1.2
VAPB-201ENST00000265619 TCN2P20062 427 aa7.56□□□□□ -1.2
VAPB-201ENST00000265619 IL11P20809 199 aa7.56□□□□□ -1.2
VAPB-201ENST00000265619 CD27P26842 260 aa7.56□□□□□ -1.2
VAPB-201ENST00000265619 BLVRBP30043 206 aaPredicted RBP7.56□□□□□ -1.2
VAPB-201ENST00000265619 FFAR4Q5NUL3 377 aa7.56□□□□□ -1.2
VAPB-201ENST00000265619 KLHL24Q6TFL4 600 aa7.56□□□□□ -1.2
VAPB-201ENST00000265619 COMMD2Q86X83 199 aa7.56□□□□□ -1.2
VAPB-201ENST00000265619 OR2M3Q8NG83 312 aa7.56□□□□□ -1.2
VAPB-201ENST00000265619 OR10G4Q8NGN3 311 aa7.56□□□□□ -1.2
VAPB-201ENST00000265619 OR2T10Q8NGZ9 312 aa7.56□□□□□ -1.2
VAPB-201ENST00000265619 CMTM2Q8TAZ6 248 aa7.56□□□□□ -1.2
VAPB-201ENST00000265619 FAM103A1Q9BTL3 118 aaKnown RBP7.56□□□□□ -1.2
VAPB-201ENST00000265619 PECRQ9BY49 303 aa7.56□□□□□ -1.2
VAPB-201ENST00000265619 MAP1LC3BQ9GZQ8 125 aa7.56□□□□□ -1.2
VAPB-201ENST00000265619 CTDSP1Q9GZU7 261 aa7.56□□□□□ -1.2
VAPB-201ENST00000265619 CST9LQ9H4G1 147 aa7.56□□□□□ -1.2
VAPB-201ENST00000265619 NAA60Q9H7X0 242 aa7.56□□□□□ -1.2
VAPB-201ENST00000265619 ELL3Q9HB65 397 aaPredicted RBP7.56□□□□□ -1.2
VAPB-201ENST00000265619 SERINC4A6NH21 518 aa7.55□□□□□ -1.2
VAPB-201ENST00000265619 B9A039 149 aa7.55□□□□□ -1.2
VAPB-201ENST00000265619 E9PLN8 166 aa7.55□□□□□ -1.2
VAPB-201ENST00000265619 TMEM225BP0DP42 221 aa7.55□□□□□ -1.2
VAPB-201ENST00000265619 OCIAD2Q56VL3 154 aa7.55□□□□□ -1.2
VAPB-201ENST00000265619 FAM78BQ5VT40 261 aa7.55□□□□□ -1.2
VAPB-201ENST00000265619 CTHRC1Q96CG8 243 aa7.55□□□□□ -1.2
VAPB-201ENST00000265619 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.55□□□□□ -1.2
VAPB-201ENST00000265619 IL19Q9UHD0 177 aa7.55□□□□□ -1.2
VAPB-201ENST00000265619 IGKV1-9A0A0C4DH69 117 aa7.55□□□□□ -1.2
VAPB-201ENST00000265619 ZNF814B7Z6K7 855 aa7.55□□□□□ -1.2
VAPB-201ENST00000265619 WNT2P09544 360 aa7.55□□□□□ -1.2
VAPB-201ENST00000265619 ZNF17P17021 662 aa7.55□□□□□ -1.2
VAPB-201ENST00000265619 EGR1P18146 543 aa7.55□□□□□ -1.2
VAPB-201ENST00000265619 DUSP1P28562 367 aa7.55□□□□□ -1.2
VAPB-201ENST00000265619 SPATA45Q537H7 98 aa7.55□□□□□ -1.2
VAPB-201ENST00000265619 KCTD18Q6PI47 426 aaPredicted RBP7.55□□□□□ -1.2
VAPB-201ENST00000265619 Q6ZN92 141 aa7.55□□□□□ -1.2
VAPB-201ENST00000265619 CENPVQ7Z7K6 275 aaPredicted RBP7.55□□□□□ -1.2
VAPB-201ENST00000265619 PATZ1Q9HBE1 687 aaKnown RBP7.55□□□□□ -1.2
VAPB-201ENST00000265619 Q9N2K0 584 aa7.55□□□□□ -1.2
VAPB-201ENST00000265619 FAM206AQ9NX38 181 aa7.55□□□□□ -1.2
VAPB-201ENST00000265619 PILRAQ9UKJ1 303 aa7.55□□□□□ -1.2
VAPB-201ENST00000265619 TRAPPC1Q9Y5R8 145 aa7.55□□□□□ -1.2
VAPB-201ENST00000265619 HS3ST3A1Q9Y663 406 aa7.55□□□□□ -1.2
VAPB-201ENST00000265619 IGHV2OR16-5A0A0B4J2B6 119 aa7.55□□□□□ -1.2
VAPB-201ENST00000265619 ODAMA1E959 279 aa7.55□□□□□ -1.2
VAPB-201ENST00000265619 PGPEP1LA6NFU8 196 aa7.55□□□□□ -1.2
VAPB-201ENST00000265619 FOXI3A8MTJ6 420 aaPredicted RBP7.55□□□□□ -1.2
VAPB-201ENST00000265619 CYC1P08574 325 aa7.55□□□□□ -1.2
VAPB-201ENST00000265619 BMP5P22003 454 aa7.55□□□□□ -1.2
VAPB-201ENST00000265619 SLC6A8P48029 635 aa7.55□□□□□ -1.2
VAPB-201ENST00000265619 RPS15AP62244 130 aaKnown RBP7.55□□□□□ -1.2
VAPB-201ENST00000265619 ZNF266Q14584 549 aa7.55□□□□□ -1.2
VAPB-201ENST00000265619 C20orf196Q8IYI0 205 aa7.55□□□□□ -1.2
VAPB-201ENST00000265619 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.55□□□□□ -1.2
VAPB-201ENST00000265619 NAT6Q93015 286 aa7.55□□□□□ -1.2
VAPB-201ENST00000265619 ATP5SQ99766 215 aa7.55□□□□□ -1.2
VAPB-201ENST00000265619 RYDENQ9NUL5 291 aaKnown RBP7.55□□□□□ -1.2
VAPB-201ENST00000265619 RBM7Q9Y580 266 aaKnown RBP7.55□□□□□ -1.2
VAPB-201ENST00000265619 CEP250Q9BV73 2442 aa7.55□□□□□ -1.2
VAPB-201ENST00000265619 AQP7P3A6NL99 342 aa7.54□□□□□ -1.2
VAPB-201ENST00000265619 HSPB2A8KAH6 182 aa7.54□□□□□ -1.2
VAPB-201ENST00000265619 F6UZH7 168 aa7.54□□□□□ -1.2
VAPB-201ENST00000265619 CYR61O00622 381 aa7.54□□□□□ -1.2
VAPB-201ENST00000265619 PHF1O43189 567 aaPredicted RBP7.54□□□□□ -1.2
VAPB-201ENST00000265619 LAMTOR5O43504 91 aa7.54□□□□□ -1.2
VAPB-201ENST00000265619 SAP30O75446 220 aa7.54□□□□□ -1.2
VAPB-201ENST00000265619 MRPL49Q13405 166 aaKnown RBP7.54□□□□□ -1.2
VAPB-201ENST00000265619 KIR2DS3Q14952 304 aa7.54□□□□□ -1.2
VAPB-201ENST00000265619 TESK1Q15569 626 aa7.54□□□□□ -1.2
VAPB-201ENST00000265619 ZNF141Q15928 474 aa7.54□□□□□ -1.2
VAPB-201ENST00000265619 HSPB2Q16082 182 aa7.54□□□□□ -1.2
VAPB-201ENST00000265619 LIAT1Q6ZQX7 453 aa7.54□□□□□ -1.2
VAPB-201ENST00000265619 ZNF596Q8TC21 504 aa7.54□□□□□ -1.2
VAPB-201ENST00000265619 WNT10AQ9GZT5 417 aa7.54□□□□□ -1.2
VAPB-201ENST00000265619 OR10A5Q9H207 317 aa7.54□□□□□ -1.2
VAPB-201ENST00000265619 NAT8Q9UHE5 227 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms