RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 PSG2P11465 335 aa12.13□□□□□ -0.47
CDH3-201ENST00000264012 NQO2P16083 231 aa12.13□□□□□ -0.47
CDH3-201ENST00000264012 HLA-GP17693 338 aa12.13□□□□□ -0.47
CDH3-201ENST00000264012 CCL8P80075 99 aa12.13□□□□□ -0.47
CDH3-201ENST00000264012 EWSR1Q01844 656 aaKnown RBP eCLIP12.13□□□□□ -0.47
CDH3-201ENST00000264012 TGIF2LYQ8IUE0 185 aa12.13□□□□□ -0.47
CDH3-201ENST00000264012 TGIF2LXQ8IUE1 241 aa12.13□□□□□ -0.47
CDH3-201ENST00000264012 SH2D2AQ9NP31 389 aa12.13□□□□□ -0.47
CDH3-201ENST00000264012 M0QZ24 198 aa12.13□□□□□ -0.47
CDH3-201ENST00000264012 IGHMP01871 453 aa12.13□□□□□ -0.47
CDH3-201ENST00000264012 CD200P41217 278 aa12.13□□□□□ -0.47
CDH3-201ENST00000264012 AAMDCQ9H7C9 122 aa12.13□□□□□ -0.47
CDH3-201ENST00000264012 DOK5Q9P104 306 aa12.13□□□□□ -0.47
CDH3-201ENST00000264012 NPTNQ9Y639 398 aa12.13□□□□□ -0.47
CDH3-201ENST00000264012 A0A1B0GU03 582 aa12.12□□□□□ -0.47
CDH3-201ENST00000264012 CDRT15L2A8MXV6 281 aa12.12□□□□□ -0.47
CDH3-201ENST00000264012 CLDN34H7C241 214 aa12.12□□□□□ -0.47
CDH3-201ENST00000264012 G6PCP35575 357 aa12.12□□□□□ -0.47
CDH3-201ENST00000264012 COL10A1Q03692 680 aa12.12□□□□□ -0.47
CDH3-201ENST00000264012 FDX2Q6P4F2 183 aa12.12□□□□□ -0.47
CDH3-201ENST00000264012 TPRX1Q8N7U7 411 aa12.12□□□□□ -0.47
CDH3-201ENST00000264012 WNT2BQ93097 391 aa12.12□□□□□ -0.47
CDH3-201ENST00000264012 THYN1Q9P016 225 aa12.12□□□□□ -0.47
CDH3-201ENST00000264012 GREB1Q4ZG55 1949 aa12.12□□□□□ -0.47
CDH3-201ENST00000264012 PRF1P14222 555 aa12.12□□□□□ -0.47
CDH3-201ENST00000264012 SULT1A1P50225 295 aa12.12□□□□□ -0.47
CDH3-201ENST00000264012 TMEM50BP56557 158 aa12.12□□□□□ -0.47
CDH3-201ENST00000264012 OR4F17Q8NGA8 305 aa12.12□□□□□ -0.47
CDH3-201ENST00000264012 ADAMTS17Q8TE56 1095 aa12.12□□□□□ -0.47
CDH3-201ENST00000264012 CLCF1Q9UBD9 225 aa12.12□□□□□ -0.47
CDH3-201ENST00000264012 LOC101059948A0A1B0GTJ6 334 aa12.12□□□□□ -0.47
CDH3-201ENST00000264012 MBPP02686 304 aaPredicted RBP12.12□□□□□ -0.47
CDH3-201ENST00000264012 IGSF11Q5DX21 431 aa12.12□□□□□ -0.47
CDH3-201ENST00000264012 OR1K1Q8NGR3 316 aa12.12□□□□□ -0.47
CDH3-201ENST00000264012 CHCHD2Q9Y6H1 151 aaPredicted RBP12.12□□□□□ -0.47
CDH3-201ENST00000264012 ZNF318Q5VUA4 2279 aa12.12□□□□□ -0.47
CDH3-201ENST00000264012 ERVH48-1M5A8F1 160 aa12.12□□□□□ -0.47
CDH3-201ENST00000264012 SEMA7AO75326 666 aa12.12□□□□□ -0.47
CDH3-201ENST00000264012 ACP1P24666 158 aa12.12□□□□□ -0.47
CDH3-201ENST00000264012 LPAR3Q9UBY5 353 aa12.12□□□□□ -0.47
CDH3-201ENST00000264012 RBFOX3A6NFN3 312 aa12.11□□□□□ -0.47
CDH3-201ENST00000264012 SNRPEP62304 92 aaKnown RBP12.11□□□□□ -0.47
CDH3-201ENST00000264012 RTP5Q14D33 572 aa12.11□□□□□ -0.47
CDH3-201ENST00000264012 DCAF12L2Q5VW00 463 aa12.11□□□□□ -0.47
CDH3-201ENST00000264012 BCL2L2Q92843 193 aaPredicted RBP12.11□□□□□ -0.47
CDH3-201ENST00000264012 K7ESF4 209 aa12.11□□□□□ -0.47
CDH3-201ENST00000264012 RPL31P62899 125 aaKnown RBP12.11□□□□□ -0.47
CDH3-201ENST00000264012 SSX8Q7RTT4 187 aa12.11□□□□□ -0.47
CDH3-201ENST00000264012 ASCL5Q7RTU5 278 aa12.11□□□□□ -0.47
CDH3-201ENST00000264012 PIPOXQ9P0Z9 390 aa12.11□□□□□ -0.47
CDH3-201ENST00000264012 SLC25A5P05141 298 aaKnown RBP12.11□□□□□ -0.47
CDH3-201ENST00000264012 ZNF586Q9NXT0 402 aa12.11□□□□□ -0.47
CDH3-201ENST00000264012 RCC2Q9P258 522 aaKnown RBP12.11□□□□□ -0.47
CDH3-201ENST00000264012 TNFSF18Q9UNG2 199 aa12.11□□□□□ -0.47
CDH3-201ENST00000264012 SYNGR1O43759 233 aa12.11□□□□□ -0.47
CDH3-201ENST00000264012 ZNF883P0CG24 379 aa12.11□□□□□ -0.47
CDH3-201ENST00000264012 SIGLECL1Q8N7X8 197 aa12.11□□□□□ -0.47
CDH3-201ENST00000264012 HARBI1Q96MB7 349 aa12.11□□□□□ -0.47
CDH3-201ENST00000264012 LIPGQ9Y5X9 500 aa12.11□□□□□ -0.47
CDH3-201ENST00000264012 PPIAL4EA0A075B759 164 aa12.1□□□□□ -0.47
CDH3-201ENST00000264012 PPIAL4DF5H284 164 aa12.1□□□□□ -0.47
CDH3-201ENST00000264012 RAMP1O60894 148 aa12.1□□□□□ -0.47
CDH3-201ENST00000264012 PPIAL4FP0DN26 164 aa12.1□□□□□ -0.47
CDH3-201ENST00000264012 ORM2P19652 201 aa12.1□□□□□ -0.47
CDH3-201ENST00000264012 PAX5Q02548 391 aa12.1□□□□□ -0.47
CDH3-201ENST00000264012 TMEM18Q96B42 140 aa12.1□□□□□ -0.47
CDH3-201ENST00000264012 FAM103A1Q9BTL3 118 aaKnown RBP12.1□□□□□ -0.47
CDH3-201ENST00000264012 WNT5BQ9H1J7 359 aa12.1□□□□□ -0.47
CDH3-201ENST00000264012 CLN8Q9UBY8 286 aa12.1□□□□□ -0.47
CDH3-201ENST00000264012 PPIAL4AQ9Y536 164 aa12.1□□□□□ -0.47
CDH3-201ENST00000264012 A0A0G2JMZ2 1700 aa12.1□□□□□ -0.47
CDH3-201ENST00000264012 LRRC37A2A6NM11 1700 aa12.1□□□□□ -0.47
CDH3-201ENST00000264012 DHRS7CA6NNS2 312 aa12.1□□□□□ -0.47
CDH3-201ENST00000264012 MGST3O14880 152 aa12.1□□□□□ -0.47
CDH3-201ENST00000264012 RFPL3SP0C7P2 107 aa12.1□□□□□ -0.47
CDH3-201ENST00000264012 AQP3Q92482 292 aa12.1□□□□□ -0.47
CDH3-201ENST00000264012 PRNDQ9UKY0 176 aa12.1□□□□□ -0.47
CDH3-201ENST00000264012 GPR132Q9UNW8 380 aa12.1□□□□□ -0.47
CDH3-201ENST00000264012 DUXBA0A1W2PPF3 345 aa12.1□□□□□ -0.47
CDH3-201ENST00000264012 CLDN14O95500 239 aa12.1□□□□□ -0.47
CDH3-201ENST00000264012 ZNF345Q14585 488 aa12.1□□□□□ -0.47
CDH3-201ENST00000264012 C10orf128Q5T292 105 aa12.1□□□□□ -0.47
CDH3-201ENST00000264012 ZNF826PQ6ZT77 177 aa12.1□□□□□ -0.47
CDH3-201ENST00000264012 MYPOPQ86VE0 399 aaPredicted RBP12.1□□□□□ -0.47
CDH3-201ENST00000264012 OR1L4Q8NGR5 311 aa12.1□□□□□ -0.47
CDH3-201ENST00000264012 FLYWCH2Q96CP2 140 aaKnown RBP12.1□□□□□ -0.47
CDH3-201ENST00000264012 OR2V2Q96R30 315 aa12.1□□□□□ -0.47
CDH3-201ENST00000264012 UBTD1Q9HAC8 227 aa12.1□□□□□ -0.47
CDH3-201ENST00000264012 TRAV20A0A0B4J274 112 aa12.1□□□□□ -0.47
CDH3-201ENST00000264012 OR4A8P0C604 315 aa12.1□□□□□ -0.47
CDH3-201ENST00000264012 SPP1P10451 314 aa12.1□□□□□ -0.47
CDH3-201ENST00000264012 FAM24BQ8N5W8 94 aa12.1□□□□□ -0.47
CDH3-201ENST00000264012 BLNKQ8WV28 456 aa12.1□□□□□ -0.47
CDH3-201ENST00000264012 SLC25A10Q9UBX3 287 aaPredicted RBP12.1□□□□□ -0.47
CDH3-201ENST00000264012 INSIG2Q9Y5U4 225 aa12.1□□□□□ -0.47
CDH3-201ENST00000264012 A0A1W2PPE3 182 aa12.09□□□□□ -0.47
CDH3-201ENST00000264012 OR2H2O95918 312 aa12.09□□□□□ -0.47
CDH3-201ENST00000264012 SCTP09683 121 aa12.09□□□□□ -0.47
CDH3-201ENST00000264012 HOXB1P14653 301 aaPredicted RBP12.09□□□□□ -0.47
CDH3-201ENST00000264012 GNG4P50150 75 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms