RNA–Protein interactions for RNA: ENST00000248054.9

SIN3B-201, Transcript of SIN3 transcription regulator family member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIN3B, Length 5,037 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-201ENST00000248054 HRASP01112 189 aa13.7□□□□□ -0.22
SIN3B-201ENST00000248054 CEACAM6P40199 344 aa13.7□□□□□ -0.22
SIN3B-201ENST00000248054 LIMK1P53667 647 aa13.7□□□□□ -0.22
SIN3B-201ENST00000248054 CFHR1Q03591 330 aa13.7□□□□□ -0.22
SIN3B-201ENST00000248054 CLEC18BQ6UXF7 455 aa13.7□□□□□ -0.22
SIN3B-201ENST00000248054 REC114Q7Z4M0 266 aa13.7□□□□□ -0.22
SIN3B-201ENST00000248054 GUCD1Q96NT3 240 aa13.7□□□□□ -0.22
SIN3B-201ENST00000248054 NDFIP1Q9BT67 221 aa13.7□□□□□ -0.22
SIN3B-201ENST00000248054 KIAA1456Q9P272 454 aa13.7□□□□□ -0.22
SIN3B-201ENST00000248054 TMEM33P57088 247 aa13.7□□□□□ -0.22
SIN3B-201ENST00000248054 PACRGQ96M98 296 aaPredicted RBP13.7□□□□□ -0.22
SIN3B-201ENST00000248054 MAP1LC3B2A6NCE7 125 aa13.7□□□□□ -0.22
SIN3B-201ENST00000248054 RPL36A-HNRNPH2H7BZ11 118 aa13.7□□□□□ -0.22
SIN3B-201ENST00000248054 GPR37O15354 613 aa13.7□□□□□ -0.22
SIN3B-201ENST00000248054 UMODP07911 640 aa13.7□□□□□ -0.22
SIN3B-201ENST00000248054 CD81P60033 236 aa13.7□□□□□ -0.22
SIN3B-201ENST00000248054 TGIF1Q15583 401 aa13.7□□□□□ -0.22
SIN3B-201ENST00000248054 MAP1LC3BQ9GZQ8 125 aa13.7□□□□□ -0.22
SIN3B-201ENST00000248054 PARP11Q9NR21 331 aa13.7□□□□□ -0.22
SIN3B-201ENST00000248054 CDS2O95674 445 aa13.7□□□□□ -0.22
SIN3B-201ENST00000248054 SRXN1Q9BYN0 137 aa13.7□□□□□ -0.22
SIN3B-201ENST00000248054 WDR13Q9H1Z4 485 aa13.7□□□□□ -0.22
SIN3B-201ENST00000248054 IL17BQ9UHF5 180 aa13.7□□□□□ -0.22
SIN3B-201ENST00000248054 BCL3P20749 454 aa13.69□□□□□ -0.22
SIN3B-201ENST00000248054 SP6Q3SY56 376 aa13.69□□□□□ -0.22
SIN3B-201ENST00000248054 TMEM255AQ5JRV8 349 aa13.69□□□□□ -0.22
SIN3B-201ENST00000248054 CDCP2Q5VXM1 449 aa13.69□□□□□ -0.22
SIN3B-201ENST00000248054 GAL3ST2Q9H3Q3 398 aa13.69□□□□□ -0.22
SIN3B-201ENST00000248054 SIRT7Q9NRC8 400 aa13.69□□□□□ -0.22
SIN3B-201ENST00000248054 OR5AC1P0C628 307 aa13.69□□□□□ -0.22
SIN3B-201ENST00000248054 RBM11P57052 281 aaKnown RBP13.69□□□□□ -0.22
SIN3B-201ENST00000248054 HLA-DRB3P79483 266 aa13.69□□□□□ -0.22
SIN3B-201ENST00000248054 LIAT1Q6ZQX7 453 aa13.69□□□□□ -0.22
SIN3B-201ENST00000248054 SLC25A40Q8TBP6 338 aa13.69□□□□□ -0.22
SIN3B-201ENST00000248054 MANBALQ9NQG1 85 aa13.69□□□□□ -0.22
SIN3B-201ENST00000248054 OOEPA6NGQ2 149 aa13.69□□□□□ -0.22
SIN3B-201ENST00000248054 CD200P41217 278 aa13.69□□□□□ -0.22
SIN3B-201ENST00000248054 SLC25A38Q96DW6 304 aa13.69□□□□□ -0.22
SIN3B-201ENST00000248054 TMEM147Q9BVK8 224 aa13.69□□□□□ -0.22
SIN3B-201ENST00000248054 ZNF703Q9H7S9 590 aaPredicted RBP13.69□□□□□ -0.22
SIN3B-201ENST00000248054 LYRM2Q9NU23 88 aaPredicted RBP13.69□□□□□ -0.22
SIN3B-201ENST00000248054 RCC2Q9P258 522 aaKnown RBP13.69□□□□□ -0.22
SIN3B-201ENST00000248054 TINAGQ9UJW2 476 aa13.69□□□□□ -0.22
SIN3B-201ENST00000248054 SLC45A2Q9UMX9 530 aa13.69□□□□□ -0.22
SIN3B-201ENST00000248054 hADV38S2A0JD32 116 aa13.69□□□□□ -0.22
SIN3B-201ENST00000248054 M0R143 59 aa13.69□□□□□ -0.22
SIN3B-201ENST00000248054 AQP7O14520 342 aa13.69□□□□□ -0.22
SIN3B-201ENST00000248054 SAXO1Q8IYX7 474 aa13.69□□□□□ -0.22
SIN3B-201ENST00000248054 ABCA7Q8IZY2 2146 aa13.69□□□□□ -0.22
SIN3B-201ENST00000248054 SLC24A4Q8NFF2 622 aa13.69□□□□□ -0.22
SIN3B-201ENST00000248054 FKBP11Q9NYL4 201 aa13.69□□□□□ -0.22
SIN3B-201ENST00000248054 DPPA3Q6W0C5 159 aa13.68□□□□□ -0.22
SIN3B-201ENST00000248054 NR2C2APQ86WQ0 139 aa13.68□□□□□ -0.22
SIN3B-201ENST00000248054 CXorf67Q86X51 503 aaPredicted RBP13.68□□□□□ -0.22
SIN3B-201ENST00000248054 OR1K1Q8NGR3 316 aa13.68□□□□□ -0.22
SIN3B-201ENST00000248054 RBFOX3A6NFN3 312 aa13.68□□□□□ -0.22
SIN3B-201ENST00000248054 COX7A2P2O60397 106 aa13.68□□□□□ -0.22
SIN3B-201ENST00000248054 NPIPB7O75200 414 aa13.68□□□□□ -0.22
SIN3B-201ENST00000248054 PDCD1Q15116 288 aa13.68□□□□□ -0.22
SIN3B-201ENST00000248054 ZBTB34Q8NCN2 500 aa13.68□□□□□ -0.22
SIN3B-201ENST00000248054 OR4A4PQ8NGN8 299 aa13.68□□□□□ -0.22
SIN3B-201ENST00000248054 ADTRPQ96IZ2 230 aa13.68□□□□□ -0.22
SIN3B-201ENST00000248054 FAM210BQ96KR6 192 aa13.68□□□□□ -0.22
SIN3B-201ENST00000248054 CARHSP1Q9Y2V2 147 aaKnown RBP13.68□□□□□ -0.22
SIN3B-201ENST00000248054 NUP210Q8TEM1 1887 aaPredicted RBP13.68□□□□□ -0.22
SIN3B-201ENST00000248054 PLXNA4Q9HCM2 1894 aa13.68□□□□□ -0.22
SIN3B-201ENST00000248054 PLXNA2O75051 1894 aa13.68□□□□□ -0.22
SIN3B-201ENST00000248054 DVL1O14640 695 aa13.68□□□□□ -0.22
SIN3B-201ENST00000248054 OR5G3P0C626 314 aa13.68□□□□□ -0.22
SIN3B-201ENST00000248054 VDAC1P21796 283 aa13.68□□□□□ -0.22
SIN3B-201ENST00000248054 RPL29P47914 159 aaKnown RBP13.68□□□□□ -0.22
SIN3B-201ENST00000248054 PMP22Q01453 160 aa13.68□□□□□ -0.22
SIN3B-201ENST00000248054 C2orf68Q2NKX9 166 aa13.68□□□□□ -0.22
SIN3B-201ENST00000248054 TMEM56Q96MV1 263 aa13.68□□□□□ -0.22
SIN3B-201ENST00000248054 CD3EP07766 207 aa13.68□□□□□ -0.22
SIN3B-201ENST00000248054 MMP7P09237 267 aaPredicted RBP13.68□□□□□ -0.22
SIN3B-201ENST00000248054 SEC11BP0C7V7 166 aa13.68□□□□□ -0.22
SIN3B-201ENST00000248054 ZNF260Q3ZCT1 412 aa13.68□□□□□ -0.22
SIN3B-201ENST00000248054 ATP5SQ99766 215 aa13.68□□□□□ -0.22
SIN3B-201ENST00000248054 LPAR5Q9H1C0 372 aa13.68□□□□□ -0.22
SIN3B-201ENST00000248054 TRAPPC1Q9Y5R8 145 aa13.68□□□□□ -0.22
SIN3B-201ENST00000248054 CBY3A6NI87 242 aa13.67□□□□□ -0.22
SIN3B-201ENST00000248054 HAND1O96004 215 aa13.67□□□□□ -0.22
SIN3B-201ENST00000248054 RPS16P62249 146 aaKnown RBP13.67□□□□□ -0.22
SIN3B-201ENST00000248054 ZNF385CQ66K41 422 aaPredicted RBP13.67□□□□□ -0.22
SIN3B-201ENST00000248054 ZNF355PQ9NSJ1 428 aa13.67□□□□□ -0.22
SIN3B-201ENST00000248054 TRAV38-1A0A0B4J264 116 aa13.67□□□□□ -0.22
SIN3B-201ENST00000248054 C16orf97H3BN30 126 aa13.67□□□□□ -0.22
SIN3B-201ENST00000248054 CEACAM1P13688 526 aa13.67□□□□□ -0.22
SIN3B-201ENST00000248054 GZMHP20718 246 aa13.67□□□□□ -0.22
SIN3B-201ENST00000248054 ALKBH6Q3KRA9 238 aa13.67□□□□□ -0.22
SIN3B-201ENST00000248054 FFAR4Q5NUL3 377 aa13.67□□□□□ -0.22
SIN3B-201ENST00000248054 RNF2Q99496 336 aa13.67□□□□□ -0.22
SIN3B-201ENST00000248054 GALR1P47211 349 aa13.67□□□□□ -0.22
SIN3B-201ENST00000248054 HIST1H3AP68431 136 aa13.67□□□□□ -0.22
SIN3B-201ENST00000248054 EFNB1P98172 346 aa13.67□□□□□ -0.22
SIN3B-201ENST00000248054 VMA21Q3ZAQ7 101 aa13.67□□□□□ -0.22
SIN3B-201ENST00000248054 C17orf78Q8N4C9 275 aa13.67□□□□□ -0.22
SIN3B-201ENST00000248054 SLC25A28Q96A46 364 aa13.67□□□□□ -0.22
SIN3B-201ENST00000248054 MED19A0JLT2 244 aaPredicted RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 120.4 ms