RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 NOVA1P51513 510 aaKnown RBP18.61■□□□□ 0.57
RNF39-201ENST00000244360 ERVK11-1P61568 191 aa18.61■□□□□ 0.57
RNF39-201ENST00000244360 VAMP2P63027 116 aa18.61■□□□□ 0.57
RNF39-201ENST00000244360 HLA-DRB3P79483 266 aa18.61■□□□□ 0.57
RNF39-201ENST00000244360 CLINT1Q14677 625 aa18.61■□□□□ 0.57
RNF39-201ENST00000244360 GABRA6Q16445 453 aa18.61■□□□□ 0.57
RNF39-201ENST00000244360 Q6ZT83 130 aa18.61■□□□□ 0.57
RNF39-201ENST00000244360 SELENOHQ8IZQ5 122 aaKnown RBP18.61■□□□□ 0.57
RNF39-201ENST00000244360 RDH5Q92781 318 aa18.61■□□□□ 0.57
RNF39-201ENST00000244360 UNKLQ9H9P5 680 aaKnown RBP18.61■□□□□ 0.57
RNF39-201ENST00000244360 TTC28Q96AY4 2481 aa18.6■□□□□ 0.57
RNF39-201ENST00000244360 C5orf52A6NGY3 159 aa18.6■□□□□ 0.57
RNF39-201ENST00000244360 UBE2CO00762 179 aa18.6■□□□□ 0.57
RNF39-201ENST00000244360 AQP7O14520 342 aa18.6■□□□□ 0.57
RNF39-201ENST00000244360 HS3ST1O14792 307 aa18.6■□□□□ 0.57
RNF39-201ENST00000244360 C1QL1O75973 258 aa18.6■□□□□ 0.57
RNF39-201ENST00000244360 UCP1P25874 307 aa18.6■□□□□ 0.57
RNF39-201ENST00000244360 IDH3GP51553 393 aaPredicted RBP18.6■□□□□ 0.57
RNF39-201ENST00000244360 BAXQ07812 192 aa18.6■□□□□ 0.57
RNF39-201ENST00000244360 SPIN3Q5JUX0 258 aa18.6■□□□□ 0.57
RNF39-201ENST00000244360 INO80CQ6PI98 192 aaPredicted RBP18.6■□□□□ 0.57
RNF39-201ENST00000244360 Q8IYB0 196 aa18.6■□□□□ 0.57
RNF39-201ENST00000244360 GCNT2Q8N0V5 402 aa18.6■□□□□ 0.57
RNF39-201ENST00000244360 OR2J1Q9GZK6 312 aa18.6■□□□□ 0.57
RNF39-201ENST00000244360 FAM24AA6NFZ4 105 aa18.59■□□□□ 0.57
RNF39-201ENST00000244360 RAC2P15153 192 aa18.59■□□□□ 0.57
RNF39-201ENST00000244360 AKR1C3P42330 323 aa18.59■□□□□ 0.57
RNF39-201ENST00000244360 SNRPEP62304 92 aaKnown RBP18.59■□□□□ 0.57
RNF39-201ENST00000244360 EIF2S3LQ2VIR3 472 aaKnown RBP18.59■□□□□ 0.57
RNF39-201ENST00000244360 ZNF324BQ6AW86 544 aaPredicted RBP18.59■□□□□ 0.57
RNF39-201ENST00000244360 IGF2-ASQ6U949 168 aa18.59■□□□□ 0.57
RNF39-201ENST00000244360 OR2G3Q8NGZ4 309 aa18.59■□□□□ 0.57
RNF39-201ENST00000244360 LILRB1Q8NHL6 650 aaPredicted RBP18.59■□□□□ 0.57
RNF39-201ENST00000244360 IL22RA2Q969J5 263 aa18.59■□□□□ 0.57
RNF39-201ENST00000244360 MALSU1Q96EH3 234 aa18.59■□□□□ 0.57
RNF39-201ENST00000244360 TRIB1Q96RU8 372 aa18.59■□□□□ 0.57
RNF39-201ENST00000244360 TREM2Q9NZC2 230 aa18.59■□□□□ 0.57
RNF39-201ENST00000244360 IGSF23A1L1A6 192 aa18.59■□□□□ 0.57
RNF39-201ENST00000244360 EIF3GO75821 320 aaKnown RBP eCLIP18.59■□□□□ 0.57
RNF39-201ENST00000244360 SMIM6P0DI80 62 aa18.59■□□□□ 0.57
RNF39-201ENST00000244360 B2MP61769 119 aa18.59■□□□□ 0.57
RNF39-201ENST00000244360 CCL28Q9NRJ3 127 aa18.59■□□□□ 0.57
RNF39-201ENST00000244360 POLDIP2Q9Y2S7 368 aa18.59■□□□□ 0.57
RNF39-201ENST00000244360 FBXO7Q9Y3I1 522 aa18.59■□□□□ 0.57
RNF39-201ENST00000244360 CELSR3Q9NYQ7 3312 aa18.59■□□□□ 0.57
RNF39-201ENST00000244360 TRAV17A0A0B4J275 112 aa18.58■□□□□ 0.57
RNF39-201ENST00000244360 IQCF6A8MYZ5 107 aa18.58■□□□□ 0.57
RNF39-201ENST00000244360 NPIPB11E5RHQ5 1161 aa18.58■□□□□ 0.57
RNF39-201ENST00000244360 DEGS1O15121 323 aa18.58■□□□□ 0.57
RNF39-201ENST00000244360 LYZL6O75951 148 aa18.58■□□□□ 0.57
RNF39-201ENST00000244360 MDH2P40926 338 aaKnown RBP18.58■□□□□ 0.57
RNF39-201ENST00000244360 IGFBP7Q16270 282 aa18.58■□□□□ 0.57
RNF39-201ENST00000244360 H1FOOQ8IZA3 346 aaPredicted RBP18.58■□□□□ 0.57
RNF39-201ENST00000244360 SCCPDHQ8NBX0 429 aa18.58■□□□□ 0.57
RNF39-201ENST00000244360 GNPNAT1Q96EK6 184 aaPredicted RBP18.58■□□□□ 0.57
RNF39-201ENST00000244360 A0A1W2PR80 420 aa18.58■□□□□ 0.56
RNF39-201ENST00000244360 RAB5AP20339 215 aa18.58■□□□□ 0.56
RNF39-201ENST00000244360 COX5AP20674 150 aa18.58■□□□□ 0.56
RNF39-201ENST00000244360 VDAC1P21796 283 aa18.58■□□□□ 0.56
RNF39-201ENST00000244360 ATP6V0CP27449 155 aa18.58■□□□□ 0.56
RNF39-201ENST00000244360 SULT1A1P50225 295 aa18.58■□□□□ 0.56
RNF39-201ENST00000244360 POLR2GP62487 172 aaKnown RBP eCLIP18.58■□□□□ 0.56
RNF39-201ENST00000244360 NMSQ5H8A3 153 aa18.58■□□□□ 0.56
RNF39-201ENST00000244360 TMEM252Q8N6L7 170 aa18.58■□□□□ 0.56
RNF39-201ENST00000244360 CD300LFQ8TDQ1 290 aa18.58■□□□□ 0.56
RNF39-201ENST00000244360 OR2W1Q9Y3N9 320 aa18.58■□□□□ 0.56
RNF39-201ENST00000244360 C3orf80F5H4A9 247 aa18.57■□□□□ 0.56
RNF39-201ENST00000244360 H0Y980 276 aa18.57■□□□□ 0.56
RNF39-201ENST00000244360 WISP2O76076 250 aa18.57■□□□□ 0.56
RNF39-201ENST00000244360 PPP1CCP36873 323 aaKnown RBP18.57■□□□□ 0.56
RNF39-201ENST00000244360 ERVS71-1P61550 626 aa18.57■□□□□ 0.56
RNF39-201ENST00000244360 KRBOX4Q5JUW0 171 aa18.57■□□□□ 0.56
RNF39-201ENST00000244360 MOB1BQ7L9L4 216 aa18.57■□□□□ 0.56
RNF39-201ENST00000244360 CMTM1Q8IZ96 169 aa18.57■□□□□ 0.56
RNF39-201ENST00000244360 SLC25A40Q8TBP6 338 aa18.57■□□□□ 0.56
RNF39-201ENST00000244360 TCEAL7Q9BRU2 100 aa18.57■□□□□ 0.56
RNF39-201ENST00000244360 HSD17B6O14756 317 aa18.57■□□□□ 0.56
RNF39-201ENST00000244360 ADAM20O43506 726 aa18.57■□□□□ 0.56
RNF39-201ENST00000244360 SSSCA1O60232 199 aa18.57■□□□□ 0.56
RNF39-201ENST00000244360 WNT2P09544 360 aa18.57■□□□□ 0.56
RNF39-201ENST00000244360 PGA5P0DJD9 388 aa18.57■□□□□ 0.56
RNF39-201ENST00000244360 MAS1LP35410 378 aa18.57■□□□□ 0.56
RNF39-201ENST00000244360 SOHLH1Q5JUK2 328 aa18.57■□□□□ 0.56
RNF39-201ENST00000244360 OR5D13Q8NGL4 314 aa18.57■□□□□ 0.56
RNF39-201ENST00000244360 A0A1W2PPH5 198 aa18.56■□□□□ 0.56
RNF39-201ENST00000244360 PGLYRP1O75594 196 aaPredicted RBP18.56■□□□□ 0.56
RNF39-201ENST00000244360 S100A9P06702 114 aaKnown RBP18.56■□□□□ 0.56
RNF39-201ENST00000244360 SELEP16581 610 aa18.56■□□□□ 0.56
RNF39-201ENST00000244360 S100GP29377 79 aa18.56■□□□□ 0.56
RNF39-201ENST00000244360 KIR2DL2P43627 348 aaPredicted RBP18.56■□□□□ 0.56
RNF39-201ENST00000244360 OR8G1Q15617 311 aa18.56■□□□□ 0.56
RNF39-201ENST00000244360 C1orf162Q8NEQ5 155 aaPredicted RBP18.56■□□□□ 0.56
RNF39-201ENST00000244360 OR10J5Q8NHC4 309 aa18.56■□□□□ 0.56
RNF39-201ENST00000244360 KIAA1456Q9P272 454 aa18.56■□□□□ 0.56
RNF39-201ENST00000244360 METTL1Q9UBP6 276 aaKnown RBP18.56■□□□□ 0.56
RNF39-201ENST00000244360 ESPL1Q14674 2120 aa18.56■□□□□ 0.56
RNF39-201ENST00000244360 A6NLC8 198 aa18.55■□□□□ 0.56
RNF39-201ENST00000244360 ACAA1P09110 424 aaPredicted RBP18.55■□□□□ 0.56
RNF39-201ENST00000244360 CBR1P16152 277 aa18.55■□□□□ 0.56
RNF39-201ENST00000244360 ID3Q02535 119 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms