RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 TAS2R60P59551 318 aa13.25□□□□□ -0.29
DDX55-201ENST00000238146 CCL7P80098 99 aa13.25□□□□□ -0.29
DDX55-201ENST00000238146 ZNF525Q8N782 197 aa13.25□□□□□ -0.29
DDX55-201ENST00000238146 OR51H1Q8NH63 302 aa13.25□□□□□ -0.29
DDX55-201ENST00000238146 C1QTNF5Q9BXJ0 243 aa13.25□□□□□ -0.29
DDX55-201ENST00000238146 SH2D2AQ9NP31 389 aa13.25□□□□□ -0.29
DDX55-201ENST00000238146 CRIM1Q9NZV1 1036 aa13.25□□□□□ -0.29
DDX55-201ENST00000238146 VAX2Q9UIW0 290 aa13.25□□□□□ -0.29
DDX55-201ENST00000238146 LOC102723996A0A087X1L8 192 aa13.24□□□□□ -0.29
DDX55-201ENST00000238146 GJE1A6NN92 205 aa13.24□□□□□ -0.29
DDX55-201ENST00000238146 MKRN2OSH3BPM6 223 aa13.24□□□□□ -0.29
DDX55-201ENST00000238146 DVL1O14640 695 aa13.24□□□□□ -0.29
DDX55-201ENST00000238146 DNPH1O43598 174 aa13.24□□□□□ -0.29
DDX55-201ENST00000238146 CBR3O75828 277 aa13.24□□□□□ -0.29
DDX55-201ENST00000238146 AMBPP02760 352 aa13.24□□□□□ -0.29
DDX55-201ENST00000238146 METTL15P1P0C7V9 234 aa13.24□□□□□ -0.29
DDX55-201ENST00000238146 GZMBP10144 247 aa13.24□□□□□ -0.29
DDX55-201ENST00000238146 PSG2P11465 335 aa13.24□□□□□ -0.29
DDX55-201ENST00000238146 SLC25A6P12236 298 aa13.24□□□□□ -0.29
DDX55-201ENST00000238146 CARD18P57730 90 aa13.24□□□□□ -0.29
DDX55-201ENST00000238146 B3GALT5-AS1P59052 145 aa13.24□□□□□ -0.29
DDX55-201ENST00000238146 PCBD1P61457 104 aa13.24□□□□□ -0.29
DDX55-201ENST00000238146 CPEB3Q8NE35 698 aaKnown RBP13.24□□□□□ -0.29
DDX55-201ENST00000238146 IMMP1LQ96LU5 166 aa13.24□□□□□ -0.29
DDX55-201ENST00000238146 PSMG3Q9BT73 122 aaPredicted RBP13.24□□□□□ -0.29
DDX55-201ENST00000238146 SRD5A3Q9H8P0 318 aa13.24□□□□□ -0.29
DDX55-201ENST00000238146 RNF150Q9ULK6 438 aa13.24□□□□□ -0.29
DDX55-201ENST00000238146 ZNF407Q9C0G0 2248 aa13.24□□□□□ -0.29
DDX55-201ENST00000238146 IGHV1-45A0A0A0MS14 117 aa13.24□□□□□ -0.29
DDX55-201ENST00000238146 GDF9O60383 454 aa13.24□□□□□ -0.29
DDX55-201ENST00000238146 SERPINE2P07093 398 aa13.24□□□□□ -0.29
DDX55-201ENST00000238146 MMP7P09237 267 aaPredicted RBP13.24□□□□□ -0.29
DDX55-201ENST00000238146 MDH2P40926 338 aaKnown RBP13.24□□□□□ -0.29
DDX55-201ENST00000238146 SSR4P51571 173 aa13.24□□□□□ -0.29
DDX55-201ENST00000238146 C20orf204Q6ZNR8 217 aa13.24□□□□□ -0.29
DDX55-201ENST00000238146 MRGPRGQ86SM5 289 aa13.24□□□□□ -0.29
DDX55-201ENST00000238146 YRDCQ86U90 279 aaKnown RBP13.24□□□□□ -0.29
DDX55-201ENST00000238146 HAPLN4Q86UW8 402 aa13.24□□□□□ -0.29
DDX55-201ENST00000238146 OR56B2PQ8NGI1 322 aa13.24□□□□□ -0.29
DDX55-201ENST00000238146 RNASEH2CQ8TDP1 164 aaKnown RBP13.24□□□□□ -0.29
DDX55-201ENST00000238146 RBKSQ9H477 322 aa13.24□□□□□ -0.29
DDX55-201ENST00000238146 MTCH1Q9NZJ7 389 aa13.24□□□□□ -0.29
DDX55-201ENST00000238146 PFN1P07737 140 aaKnown RBP13.23□□□□□ -0.29
DDX55-201ENST00000238146 IAPPP10997 89 aa13.23□□□□□ -0.29
DDX55-201ENST00000238146 GPM6AP51674 278 aa13.23□□□□□ -0.29
DDX55-201ENST00000238146 COL10A1Q03692 680 aa13.23□□□□□ -0.29
DDX55-201ENST00000238146 ABLIM2Q6H8Q1 611 aa13.23□□□□□ -0.29
DDX55-201ENST00000238146 CCDC74BQ96LY2 380 aa13.23□□□□□ -0.29
DDX55-201ENST00000238146 GPR35Q9HC97 309 aa13.23□□□□□ -0.29
DDX55-201ENST00000238146 ZNHIT1O43257 154 aa13.23□□□□□ -0.29
DDX55-201ENST00000238146 SYNGR2O43760 224 aa13.23□□□□□ -0.29
DDX55-201ENST00000238146 CXCL13O43927 109 aa13.23□□□□□ -0.29
DDX55-201ENST00000238146 PRDX4Q13162 271 aa13.23□□□□□ -0.29
DDX55-201ENST00000238146 LRRC75BQ2VPJ9 315 aa13.23□□□□□ -0.29
DDX55-201ENST00000238146 ACSF3Q4G176 576 aaPredicted RBP13.23□□□□□ -0.29
DDX55-201ENST00000238146 ZNF324BQ6AW86 544 aaPredicted RBP13.23□□□□□ -0.29
DDX55-201ENST00000238146 GGNQ86UU5 652 aa13.23□□□□□ -0.29
DDX55-201ENST00000238146 RNASE11Q8TAA1 199 aaKnown RBP13.23□□□□□ -0.29
DDX55-201ENST00000238146 MISP3Q96FF7 219 aa13.23□□□□□ -0.29
DDX55-201ENST00000238146 PYGO2Q9BRQ0 406 aa13.23□□□□□ -0.29
DDX55-201ENST00000238146 PRDM14Q9GZV8 571 aa13.23□□□□□ -0.29
DDX55-201ENST00000238146 OCIAD1Q9NX40 245 aa13.23□□□□□ -0.29
DDX55-201ENST00000238146 CACNG5Q9UF02 275 aa13.23□□□□□ -0.29
DDX55-201ENST00000238146 IGKV1-39P01597 117 aa13.22□□□□□ -0.29
DDX55-201ENST00000238146 IGKV1D-39P04432 117 aa13.22□□□□□ -0.29
DDX55-201ENST00000238146 SRFP11831 508 aa13.22□□□□□ -0.29
DDX55-201ENST00000238146 FGF7P21781 194 aa13.22□□□□□ -0.29
DDX55-201ENST00000238146 SERF2P84101 59 aa13.22□□□□□ -0.29
DDX55-201ENST00000238146 ADIRFQ15847 76 aa13.22□□□□□ -0.29
DDX55-201ENST00000238146 COLCA1Q6ZS62 124 aa13.22□□□□□ -0.29
DDX55-201ENST00000238146 BEND4Q6ZU67 534 aa13.22□□□□□ -0.29
DDX55-201ENST00000238146 OR1P1Q8NH06 330 aa13.22□□□□□ -0.29
DDX55-201ENST00000238146 MRPL30Q8TCC3 161 aaKnown RBP13.22□□□□□ -0.29
DDX55-201ENST00000238146 DNASE2BQ8WZ79 361 aa13.22□□□□□ -0.29
DDX55-201ENST00000238146 OR2W1Q9Y3N9 320 aa13.22□□□□□ -0.29
DDX55-201ENST00000238146 MAP1LC3B2A6NCE7 125 aa13.22□□□□□ -0.29
DDX55-201ENST00000238146 ARGFXA6NJG6 315 aa13.22□□□□□ -0.29
DDX55-201ENST00000238146 A8MWP6 167 aa13.22□□□□□ -0.29
DDX55-201ENST00000238146 UMODP07911 640 aa13.22□□□□□ -0.29
DDX55-201ENST00000238146 COX6A1P12074 109 aa13.22□□□□□ -0.29
DDX55-201ENST00000238146 RIPPLY2Q5TAB7 128 aa13.22□□□□□ -0.29
DDX55-201ENST00000238146 C16orf82Q7Z2V1 217 aa13.22□□□□□ -0.29
DDX55-201ENST00000238146 SAXO1Q8IYX7 474 aa13.22□□□□□ -0.29
DDX55-201ENST00000238146 ZNF664Q8N3J9 261 aa13.22□□□□□ -0.29
DDX55-201ENST00000238146 SMIM7Q9BQ49 75 aa13.22□□□□□ -0.29
DDX55-201ENST00000238146 C2orf88Q9BSF0 95 aa13.22□□□□□ -0.29
DDX55-201ENST00000238146 MAP1LC3BQ9GZQ8 125 aa13.22□□□□□ -0.29
DDX55-201ENST00000238146 PLK3Q9H4B4 646 aa13.22□□□□□ -0.29
DDX55-201ENST00000238146 PSENENQ9NZ42 101 aa13.22□□□□□ -0.29
DDX55-201ENST00000238146 NAT8Q9UHE5 227 aa13.22□□□□□ -0.29
DDX55-201ENST00000238146 GAB2Q9UQC2 676 aa13.22□□□□□ -0.29
DDX55-201ENST00000238146 CEP192Q8TEP8 1941 aa13.21□□□□□ -0.29
DDX55-201ENST00000238146 CHD3Q12873 2000 aaKnown RBP13.21□□□□□ -0.29
DDX55-201ENST00000238146 CYC1P08574 325 aa13.21□□□□□ -0.29
DDX55-201ENST00000238146 S100GP29377 79 aa13.21□□□□□ -0.29
DDX55-201ENST00000238146 COL19A1Q14993 1142 aa13.21□□□□□ -0.29
DDX55-201ENST00000238146 NCR3LG1Q68D85 454 aa13.21□□□□□ -0.29
DDX55-201ENST00000238146 SLC23A3Q6PIS1 610 aa13.21□□□□□ -0.29
DDX55-201ENST00000238146 REPIN1Q9BWE0 567 aaKnown RBP13.21□□□□□ -0.29
DDX55-201ENST00000238146 ERRFI1Q9UJM3 462 aaPredicted RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms