RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 NSG1A0A0A6YYJ2 146 aa11.76□□□□□ -0.53
GABPB1-201ENST00000220429 CNN3Q15417 329 aaKnown RBP11.76□□□□□ -0.53
GABPB1-201ENST00000220429 WDR38Q5JTN6 314 aa11.76□□□□□ -0.53
GABPB1-201ENST00000220429 SAMD13Q5VXD3 122 aa11.76□□□□□ -0.53
GABPB1-201ENST00000220429 OR2T10Q8NGZ9 312 aa11.76□□□□□ -0.53
GABPB1-201ENST00000220429 OTOSQ8NHW6 89 aa11.76□□□□□ -0.53
GABPB1-201ENST00000220429 TXNIPQ9H3M7 391 aa11.76□□□□□ -0.53
GABPB1-201ENST00000220429 MANBALQ9NQG1 85 aa11.76□□□□□ -0.53
GABPB1-201ENST00000220429 PLPP3O14495 311 aa11.75□□□□□ -0.53
GABPB1-201ENST00000220429 SCRG1O75711 98 aa11.75□□□□□ -0.53
GABPB1-201ENST00000220429 IL11P20809 199 aa11.75□□□□□ -0.53
GABPB1-201ENST00000220429 ASCL1P50553 236 aa11.75□□□□□ -0.53
GABPB1-201ENST00000220429 SQSTM1Q13501 440 aa11.75□□□□□ -0.53
GABPB1-201ENST00000220429 OR52L2PQ8NGH6 319 aa11.75□□□□□ -0.53
GABPB1-201ENST00000220429 SLAMF6Q96DU3 332 aa11.75□□□□□ -0.53
GABPB1-201ENST00000220429 ELOVL5Q9NYP7 299 aa11.75□□□□□ -0.53
GABPB1-201ENST00000220429 TAS2R4Q9NYW5 299 aa11.75□□□□□ -0.53
GABPB1-201ENST00000220429 MRPL27Q9P0M9 148 aaKnown RBP11.75□□□□□ -0.53
GABPB1-201ENST00000220429 MRPS16Q9Y3D3 137 aaKnown RBP11.75□□□□□ -0.53
GABPB1-201ENST00000220429 TMEM14AQ9Y6G1 99 aa11.75□□□□□ -0.53
GABPB1-201ENST00000220429 A0A1B0GV72 72 aa11.75□□□□□ -0.53
GABPB1-201ENST00000220429 MPLP40238 635 aa11.75□□□□□ -0.53
GABPB1-201ENST00000220429 ZNF266Q14584 549 aa11.75□□□□□ -0.53
GABPB1-201ENST00000220429 OR4A47Q6IF82 309 aa11.75□□□□□ -0.53
GABPB1-201ENST00000220429 CENPVQ7Z7K6 275 aaPredicted RBP11.75□□□□□ -0.53
GABPB1-201ENST00000220429 SAP25Q8TEE9 199 aa11.75□□□□□ -0.53
GABPB1-201ENST00000220429 MRPL24Q96A35 216 aaKnown RBP11.75□□□□□ -0.53
GABPB1-201ENST00000220429 ZNF48Q96MX3 618 aaPredicted RBP11.75□□□□□ -0.53
GABPB1-201ENST00000220429 DUSP23Q9BVJ7 150 aa11.75□□□□□ -0.53
GABPB1-201ENST00000220429 MRPL13Q9BYD1 178 aaKnown RBP11.75□□□□□ -0.53
GABPB1-201ENST00000220429 CISD1Q9NZ45 108 aaKnown RBP11.75□□□□□ -0.53
GABPB1-201ENST00000220429 DHDHQ9UQ10 334 aa11.75□□□□□ -0.53
GABPB1-201ENST00000220429 IGLV1-36A0A0B4J1U3 117 aa11.74□□□□□ -0.53
GABPB1-201ENST00000220429 IGHV5-10-1A0A0J9YXX1 117 aa11.74□□□□□ -0.53
GABPB1-201ENST00000220429 SLC16A7O60669 478 aa11.74□□□□□ -0.53
GABPB1-201ENST00000220429 HLA-DQA2P01906 255 aa11.74□□□□□ -0.53
GABPB1-201ENST00000220429 HLA-DOBP13765 273 aa11.74□□□□□ -0.53
GABPB1-201ENST00000220429 CTLA4P16410 223 aa11.74□□□□□ -0.53
GABPB1-201ENST00000220429 SLC17A1Q14916 467 aa11.74□□□□□ -0.53
GABPB1-201ENST00000220429 C1orf174Q8IYL3 243 aa11.74□□□□□ -0.53
GABPB1-201ENST00000220429 SELENOHQ8IZQ5 122 aaKnown RBP11.74□□□□□ -0.53
GABPB1-201ENST00000220429 OR2I1PQ8NGU4 316 aa11.74□□□□□ -0.53
GABPB1-201ENST00000220429 RYDENQ9NUL5 291 aaKnown RBP11.74□□□□□ -0.53
GABPB1-201ENST00000220429 EML6Q6ZMW3 1958 aa11.74□□□□□ -0.53
GABPB1-201ENST00000220429 IGHV1-69-2A0A0G2JMI3 117 aa11.74□□□□□ -0.53
GABPB1-201ENST00000220429 GAGE12BA1L429 117 aa11.74□□□□□ -0.53
GABPB1-201ENST00000220429 CDS2O95674 445 aa11.74□□□□□ -0.53
GABPB1-201ENST00000220429 IGHMP01871 453 aa11.74□□□□□ -0.53
GABPB1-201ENST00000220429 GNRHRP30968 328 aa11.74□□□□□ -0.53
GABPB1-201ENST00000220429 C1orf122Q6ZSJ8 110 aa11.74□□□□□ -0.53
GABPB1-201ENST00000220429 ERASQ7Z444 233 aa11.74□□□□□ -0.53
GABPB1-201ENST00000220429 TMEM186Q96B77 213 aa11.74□□□□□ -0.53
GABPB1-201ENST00000220429 NAT8Q9UHE5 227 aa11.74□□□□□ -0.53
GABPB1-201ENST00000220429 PRSS50Q9UI38 385 aa11.74□□□□□ -0.53
GABPB1-201ENST00000220429 RARRES3Q9UL19 164 aa11.74□□□□□ -0.53
GABPB1-201ENST00000220429 WDFY4Q6ZS81 3184 aa11.74□□□□□ -0.53
GABPB1-201ENST00000220429 MPZL1O95297 269 aa11.73□□□□□ -0.53
GABPB1-201ENST00000220429 SERPINA7P05543 415 aa11.73□□□□□ -0.53
GABPB1-201ENST00000220429 DBHP09172 617 aa11.73□□□□□ -0.53
GABPB1-201ENST00000220429 TSPOP30536 169 aa11.73□□□□□ -0.53
GABPB1-201ENST00000220429 MC5RP33032 325 aa11.73□□□□□ -0.53
GABPB1-201ENST00000220429 PTGER4P35408 488 aa11.73□□□□□ -0.53
GABPB1-201ENST00000220429 MEP1BQ16820 701 aa11.73□□□□□ -0.53
GABPB1-201ENST00000220429 TCF24Q7RTU0 167 aa11.73□□□□□ -0.53
GABPB1-201ENST00000220429 CALHM1Q8IU99 346 aa11.73□□□□□ -0.53
GABPB1-201ENST00000220429 OR5AU1Q8NGC0 362 aa11.73□□□□□ -0.53
GABPB1-201ENST00000220429 OR13G1Q8NGZ3 307 aa11.73□□□□□ -0.53
GABPB1-201ENST00000220429 RHBDD1Q8TEB9 315 aa11.73□□□□□ -0.53
GABPB1-201ENST00000220429 CDX2Q99626 313 aaPredicted RBP11.73□□□□□ -0.53
GABPB1-201ENST00000220429 ELOVL3Q9HB03 270 aa11.73□□□□□ -0.53
GABPB1-201ENST00000220429 TRAPPC1Q9Y5R8 145 aa11.73□□□□□ -0.53
GABPB1-201ENST00000220429 ZFP92A6NM28 416 aa11.73□□□□□ -0.53
GABPB1-201ENST00000220429 GDF9O60383 454 aa11.73□□□□□ -0.53
GABPB1-201ENST00000220429 SAP30O75446 220 aa11.73□□□□□ -0.53
GABPB1-201ENST00000220429 TOX4O94842 621 aa11.73□□□□□ -0.53
GABPB1-201ENST00000220429 EMP2P54851 167 aa11.73□□□□□ -0.53
GABPB1-201ENST00000220429 TLE3Q04726 772 aa11.73□□□□□ -0.53
GABPB1-201ENST00000220429 MFGE8Q08431 387 aaPredicted RBP11.73□□□□□ -0.53
GABPB1-201ENST00000220429 C17orf67Q0P5P2 114 aa11.73□□□□□ -0.53
GABPB1-201ENST00000220429 LHFPL1Q86WI0 220 aa11.73□□□□□ -0.53
GABPB1-201ENST00000220429 EMG1Q92979 244 aaKnown RBP11.73□□□□□ -0.53
GABPB1-201ENST00000220429 STARD4Q96DR4 205 aa11.73□□□□□ -0.53
GABPB1-201ENST00000220429 ZNF703Q9H7S9 590 aaPredicted RBP11.73□□□□□ -0.53
GABPB1-201ENST00000220429 CDC42EP3Q9UKI2 254 aa11.73□□□□□ -0.53
GABPB1-201ENST00000220429 VDAC3Q9Y277 283 aa11.73□□□□□ -0.53
GABPB1-201ENST00000220429 B3GALT5Q9Y2C3 310 aa11.73□□□□□ -0.53
GABPB1-201ENST00000220429 MED12Q93074 2177 aa11.73□□□□□ -0.53
GABPB1-201ENST00000220429 MS4A18H0YCH9 400 aa11.73□□□□□ -0.53
GABPB1-201ENST00000220429 BCL2P10415 239 aa11.73□□□□□ -0.53
GABPB1-201ENST00000220429 TAS2R30P59541 319 aa11.73□□□□□ -0.53
GABPB1-201ENST00000220429 HLA-BQ31612 363 aa11.73□□□□□ -0.53
GABPB1-201ENST00000220429 MS4A18Q3C1V0 323 aa11.73□□□□□ -0.53
GABPB1-201ENST00000220429 BSXQ3C1V8 233 aa11.73□□□□□ -0.53
GABPB1-201ENST00000220429 PMS2CLQ68D20 193 aa11.73□□□□□ -0.53
GABPB1-201ENST00000220429 FBXL14Q8N1E6 418 aa11.73□□□□□ -0.53
GABPB1-201ENST00000220429 OR5H2Q8NGV7 314 aa11.73□□□□□ -0.53
GABPB1-201ENST00000220429 ST8SIA1Q92185 356 aa11.73□□□□□ -0.53
GABPB1-201ENST00000220429 C8orf44Q96CB5 159 aa11.73□□□□□ -0.53
GABPB1-201ENST00000220429 PATZ1Q9HBE1 687 aaKnown RBP11.73□□□□□ -0.53
GABPB1-201ENST00000220429 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms