RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-229ENST00000641891 ASCL1P50553 236 aa14.36□□□□□ -0.11
PHGDH-229ENST00000641891 ZNF826PQ6ZT77 177 aa14.36□□□□□ -0.11
PHGDH-229ENST00000641891 CABLES2Q9BTV7 478 aa14.36□□□□□ -0.11
PHGDH-229ENST00000641891 PARP12Q9H0J9 701 aaKnown RBP14.36□□□□□ -0.11
PHGDH-229ENST00000641891 OBP2BQ9NPH6 170 aa14.36□□□□□ -0.11
PHGDH-229ENST00000641891 OR2W1Q9Y3N9 320 aa14.36□□□□□ -0.11
PHGDH-229ENST00000641891 TMEM218A2RU14 115 aa14.36□□□□□ -0.11
PHGDH-229ENST00000641891 WNT9BO14905 357 aa14.36□□□□□ -0.11
PHGDH-229ENST00000641891 TNFSF13O75888 250 aa14.36□□□□□ -0.11
PHGDH-229ENST00000641891 CDS2O95674 445 aa14.36□□□□□ -0.11
PHGDH-229ENST00000641891 CECR9P0C854 216 aa14.36□□□□□ -0.11
PHGDH-229ENST00000641891 P2RY1P47900 373 aa14.36□□□□□ -0.11
PHGDH-229ENST00000641891 SULT1A2P50226 295 aa14.36□□□□□ -0.11
PHGDH-229ENST00000641891 POLR2GP62487 172 aaKnown RBP eCLIP14.36□□□□□ -0.11
PHGDH-229ENST00000641891 ZNF497Q6ZNH5 498 aa14.36□□□□□ -0.11
PHGDH-229ENST00000641891 MAGT1Q9H0U3 335 aa14.36□□□□□ -0.11
PHGDH-229ENST00000641891 CNOT4O95628 575 aaKnown RBP14.35□□□□□ -0.11
PHGDH-229ENST00000641891 TFF1P04155 84 aa14.35□□□□□ -0.11
PHGDH-229ENST00000641891 UCP1P25874 307 aa14.35□□□□□ -0.11
PHGDH-229ENST00000641891 CXorf66Q5JRM2 361 aaPredicted RBP14.35□□□□□ -0.11
PHGDH-229ENST00000641891 EIF5AL1Q6IS14 154 aaKnown RBP14.35□□□□□ -0.11
PHGDH-229ENST00000641891 SEM1Q6ZVN7 128 aa14.35□□□□□ -0.11
PHGDH-229ENST00000641891 Q8IYB0 196 aa14.35□□□□□ -0.11
PHGDH-229ENST00000641891 PRSS33Q8NF86 280 aa14.35□□□□□ -0.11
PHGDH-229ENST00000641891 C11orf1Q9H5F2 150 aa14.35□□□□□ -0.11
PHGDH-229ENST00000641891 OR14J1Q9UGF5 321 aa14.35□□□□□ -0.11
PHGDH-229ENST00000641891 FAM96BQ9Y3D0 163 aa14.35□□□□□ -0.11
PHGDH-229ENST00000641891 ZNF169Q14929 603 aaPredicted RBP14.34□□□□□ -0.11
PHGDH-229ENST00000641891 CMTM1Q8IZ96 169 aa14.34□□□□□ -0.11
PHGDH-229ENST00000641891 UBAC2Q8NBM4 344 aa14.34□□□□□ -0.11
PHGDH-229ENST00000641891 OR51H1Q8NH63 302 aa14.34□□□□□ -0.11
PHGDH-229ENST00000641891 STARD4Q96DR4 205 aa14.34□□□□□ -0.11
PHGDH-229ENST00000641891 SAT2Q96F10 170 aaPredicted RBP14.34□□□□□ -0.11
PHGDH-229ENST00000641891 RHOFQ9HBH0 211 aa14.34□□□□□ -0.11
PHGDH-229ENST00000641891 PLSCR4Q9NRQ2 329 aa14.34□□□□□ -0.11
PHGDH-229ENST00000641891 GLS2Q9UI32 602 aa14.34□□□□□ -0.11
PHGDH-229ENST00000641891 PURGQ9UJV8 347 aaKnown RBP14.34□□□□□ -0.11
PHGDH-229ENST00000641891 TRAPPC2LQ9UL33 140 aa14.34□□□□□ -0.11
PHGDH-229ENST00000641891 PRR14LQ5THK1 2151 aa14.34□□□□□ -0.11
PHGDH-229ENST00000641891 FAM24AA6NFZ4 105 aa14.34□□□□□ -0.11
PHGDH-229ENST00000641891 TM4SF5O14894 197 aa14.34□□□□□ -0.11
PHGDH-229ENST00000641891 SSSCA1O60232 199 aa14.34□□□□□ -0.11
PHGDH-229ENST00000641891 NKX2-1P43699 371 aaPredicted RBP14.34□□□□□ -0.11
PHGDH-229ENST00000641891 PJVKQ0ZLH3 352 aa14.34□□□□□ -0.11
PHGDH-229ENST00000641891 ZNF146Q15072 292 aa14.34□□□□□ -0.11
PHGDH-229ENST00000641891 NMSQ5H8A3 153 aa14.34□□□□□ -0.11
PHGDH-229ENST00000641891 GPR157Q5UAW9 335 aa14.34□□□□□ -0.11
PHGDH-229ENST00000641891 ZADH2Q8N4Q0 377 aa14.34□□□□□ -0.11
PHGDH-229ENST00000641891 C1orf162Q8NEQ5 155 aaPredicted RBP14.34□□□□□ -0.11
PHGDH-229ENST00000641891 ZFP57Q9NU63 452 aa14.34□□□□□ -0.11
PHGDH-229ENST00000641891 H0Y980 276 aa14.33□□□□□ -0.11
PHGDH-229ENST00000641891 AGPAT2O15120 278 aa14.33□□□□□ -0.11
PHGDH-229ENST00000641891 HOXB1P14653 301 aaPredicted RBP14.33□□□□□ -0.11
PHGDH-229ENST00000641891 MDH2P40926 338 aaKnown RBP14.33□□□□□ -0.11
PHGDH-229ENST00000641891 ZNF273Q14593 569 aa14.33□□□□□ -0.11
PHGDH-229ENST00000641891 GNMTQ14749 295 aa14.33□□□□□ -0.11
PHGDH-229ENST00000641891 TESK1Q15569 626 aa14.33□□□□□ -0.11
PHGDH-229ENST00000641891 PRAMEF6Q5VXH4 476 aa14.33□□□□□ -0.11
PHGDH-229ENST00000641891 Q6ZR03 302 aa14.33□□□□□ -0.11
PHGDH-229ENST00000641891 C11orf53Q8IXP5 236 aa14.33□□□□□ -0.11
PHGDH-229ENST00000641891 OR8G5Q8NG78 346 aa14.33□□□□□ -0.11
PHGDH-229ENST00000641891 BOD1Q96IK1 185 aa14.33□□□□□ -0.11
PHGDH-229ENST00000641891 SH3BGRL3Q9H299 93 aa14.33□□□□□ -0.11
PHGDH-229ENST00000641891 ARV1Q9H2C2 271 aa14.33□□□□□ -0.11
PHGDH-229ENST00000641891 TREM1Q9NP99 234 aa14.33□□□□□ -0.11
PHGDH-229ENST00000641891 CNOT1A5YKK6 2376 aaKnown RBP14.33□□□□□ -0.12
PHGDH-229ENST00000641891 BOD1L1Q8NFC6 3051 aa14.33□□□□□ -0.12
PHGDH-229ENST00000641891 LAMA5O15230 3695 aa14.33□□□□□ -0.12
PHGDH-229ENST00000641891 A0A0G2JRQ6 117 aa14.33□□□□□ -0.12
PHGDH-229ENST00000641891 IGSF23A1L1A6 192 aa14.33□□□□□ -0.12
PHGDH-229ENST00000641891 AHRRA9YTQ3 701 aa14.33□□□□□ -0.12
PHGDH-229ENST00000641891 SH2D1BO14796 132 aa14.33□□□□□ -0.12
PHGDH-229ENST00000641891 PSPNO60542 156 aa14.33□□□□□ -0.12
PHGDH-229ENST00000641891 HAND1O96004 215 aa14.33□□□□□ -0.12
PHGDH-229ENST00000641891 CGAP01215 116 aa14.33□□□□□ -0.12
PHGDH-229ENST00000641891 IGLV2-14P01704 120 aa14.33□□□□□ -0.12
PHGDH-229ENST00000641891 F2RP25116 425 aa14.33□□□□□ -0.12
PHGDH-229ENST00000641891 FABP6P51161 128 aa14.33□□□□□ -0.12
PHGDH-229ENST00000641891 EWSR1Q01844 656 aaKnown RBP eCLIP14.33□□□□□ -0.12
PHGDH-229ENST00000641891 GUCA2BQ16661 112 aa14.33□□□□□ -0.12
PHGDH-229ENST00000641891 IL34Q6ZMJ4 242 aa14.33□□□□□ -0.12
PHGDH-229ENST00000641891 Q6ZRG5 221 aa14.33□□□□□ -0.12
PHGDH-229ENST00000641891 OR10V1Q8NGI7 309 aa14.33□□□□□ -0.12
PHGDH-229ENST00000641891 OR5D13Q8NGL4 314 aa14.33□□□□□ -0.12
PHGDH-229ENST00000641891 MSL2Q9HCI7 577 aa14.33□□□□□ -0.12
PHGDH-229ENST00000641891 LUZP4Q9P127 313 aa14.33□□□□□ -0.12
PHGDH-229ENST00000641891 PROCRQ9UNN8 238 aa14.33□□□□□ -0.12
PHGDH-229ENST00000641891 DSPP15924 2871 aaKnown RBP14.32□□□□□ -0.12
PHGDH-229ENST00000641891 IGHV1-18A0A0C4DH31 117 aa14.32□□□□□ -0.12
PHGDH-229ENST00000641891 FAM74A7A6NL05 159 aa14.32□□□□□ -0.12
PHGDH-229ENST00000641891 TMEM210A6NLX4 147 aa14.32□□□□□ -0.12
PHGDH-229ENST00000641891 PROB1E7EW31 1015 aa14.32□□□□□ -0.12
PHGDH-229ENST00000641891 TIMM8AO60220 97 aaPredicted RBP14.32□□□□□ -0.12
PHGDH-229ENST00000641891 ATG12O94817 140 aa14.32□□□□□ -0.12
PHGDH-229ENST00000641891 PSG2P11465 335 aa14.32□□□□□ -0.12
PHGDH-229ENST00000641891 MUC1P15941 1255 aaPredicted RBP14.32□□□□□ -0.12
PHGDH-229ENST00000641891 FAM74A3Q4VXF1 159 aa14.32□□□□□ -0.12
PHGDH-229ENST00000641891 BTNL8Q6UX41 500 aa14.32□□□□□ -0.12
PHGDH-229ENST00000641891 ZNF71Q9NQZ8 489 aaPredicted RBP14.32□□□□□ -0.12
PHGDH-229ENST00000641891 TREM2Q9NZC2 230 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms