RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 ALX4Q9H161 411 aaPredicted RBP7.95□□□□□ -1.14
PDLIM5-223ENST00000627587 MED28Q9H204 178 aa7.95□□□□□ -1.14
PDLIM5-223ENST00000627587 MS4A5Q9H3V2 200 aa7.95□□□□□ -1.14
PDLIM5-223ENST00000627587 TMEM165Q9HC07 324 aa7.95□□□□□ -1.14
PDLIM5-223ENST00000627587 Q9N2K0 584 aa7.95□□□□□ -1.14
PDLIM5-223ENST00000627587 GCM1Q9NP62 436 aa7.95□□□□□ -1.14
PDLIM5-223ENST00000627587 DYNLRB1Q9NP97 96 aa7.95□□□□□ -1.14
PDLIM5-223ENST00000627587 CISD1Q9NZ45 108 aaKnown RBP7.95□□□□□ -1.14
PDLIM5-223ENST00000627587 RNF7Q9UBF6 113 aa7.95□□□□□ -1.14
PDLIM5-223ENST00000627587 DNAJB11Q9UBS4 358 aa7.95□□□□□ -1.14
PDLIM5-223ENST00000627587 JMJD1CQ15652 2540 aa7.95□□□□□ -1.14
PDLIM5-223ENST00000627587 VPS13CQ709C8 3753 aa7.94□□□□□ -1.14
PDLIM5-223ENST00000627587 TRBV6-6A0A0A6YYG2 114 aa7.94□□□□□ -1.14
PDLIM5-223ENST00000627587 KIR2DS1A0A191URI9 304 aa7.94□□□□□ -1.14
PDLIM5-223ENST00000627587 RFPL4AA6NLU0 287 aa7.94□□□□□ -1.14
PDLIM5-223ENST00000627587 POM121CA8CG34 1229 aa7.94□□□□□ -1.14
PDLIM5-223ENST00000627587 A8MV72 311 aaPredicted RBP7.94□□□□□ -1.14
PDLIM5-223ENST00000627587 RFPL4AL1F8VTS6 287 aa7.94□□□□□ -1.14
PDLIM5-223ENST00000627587 SSNA1O43805 119 aa7.94□□□□□ -1.14
PDLIM5-223ENST00000627587 CREBL2O60519 120 aaPredicted RBP7.94□□□□□ -1.14
PDLIM5-223ENST00000627587 ZNF205O95201 554 aa7.94□□□□□ -1.14
PDLIM5-223ENST00000627587 OR5H8P0DN80 308 aa7.94□□□□□ -1.14
PDLIM5-223ENST00000627587 IRF2P14316 349 aa7.94□□□□□ -1.14
PDLIM5-223ENST00000627587 KIR2DS4P43632 304 aa7.94□□□□□ -1.14
PDLIM5-223ENST00000627587 CCL8P80075 99 aa7.94□□□□□ -1.14
PDLIM5-223ENST00000627587 KIR2DS1Q14954 304 aa7.94□□□□□ -1.14
PDLIM5-223ENST00000627587 HERPUD1Q15011 391 aa7.94□□□□□ -1.14
PDLIM5-223ENST00000627587 ZNF672Q499Z4 452 aaPredicted RBP7.94□□□□□ -1.14
PDLIM5-223ENST00000627587 ZNF880Q6PDB4 577 aa7.94□□□□□ -1.14
PDLIM5-223ENST00000627587 BOLLQ8N9W6 283 aaKnown RBP7.94□□□□□ -1.14
PDLIM5-223ENST00000627587 OR11H7Q8NGC8 314 aa7.94□□□□□ -1.14
PDLIM5-223ENST00000627587 OR52B4Q8NGK2 314 aa7.94□□□□□ -1.14
PDLIM5-223ENST00000627587 SCGB3A2Q96PL1 93 aa7.94□□□□□ -1.14
PDLIM5-223ENST00000627587 DHRS9Q9BPW9 319 aa7.94□□□□□ -1.14
PDLIM5-223ENST00000627587 EGLN1Q9GZT9 426 aa7.94□□□□□ -1.14
PDLIM5-223ENST00000627587 DECR2Q9NUI1 292 aa7.94□□□□□ -1.14
PDLIM5-223ENST00000627587 DCAF16Q9NXF7 216 aa7.94□□□□□ -1.14
PDLIM5-223ENST00000627587 PPP1R3CQ9UQK1 317 aa7.94□□□□□ -1.14
PDLIM5-223ENST00000627587 WIPI2Q9Y4P8 454 aa7.94□□□□□ -1.14
PDLIM5-223ENST00000627587 IGKV1D-17A0A075B6S4 117 aa7.94□□□□□ -1.14
PDLIM5-223ENST00000627587 IGKV1-6A0A0C4DH72 117 aa7.94□□□□□ -1.14
PDLIM5-223ENST00000627587 SNRPGP15A8MWD9 76 aa7.94□□□□□ -1.14
PDLIM5-223ENST00000627587 IFNA2P01563 188 aa7.94□□□□□ -1.14
PDLIM5-223ENST00000627587 GSTT2P0CG29 244 aa7.94□□□□□ -1.14
PDLIM5-223ENST00000627587 ECI1P42126 302 aa7.94□□□□□ -1.14
PDLIM5-223ENST00000627587 GLP1RP43220 463 aa7.94□□□□□ -1.14
PDLIM5-223ENST00000627587 KCNJ3P48549 501 aa7.94□□□□□ -1.14
PDLIM5-223ENST00000627587 ATXN7L3Q14CW9 347 aaPredicted RBP7.94□□□□□ -1.14
PDLIM5-223ENST00000627587 C4orf46Q504U0 113 aa7.94□□□□□ -1.14
PDLIM5-223ENST00000627587 FAM201AQ5SY85 155 aa7.94□□□□□ -1.14
PDLIM5-223ENST00000627587 CD276Q5ZPR3 534 aa7.94□□□□□ -1.14
PDLIM5-223ENST00000627587 ZNF497Q6ZNH5 498 aa7.94□□□□□ -1.14
PDLIM5-223ENST00000627587 MOB1BQ7L9L4 216 aa7.94□□□□□ -1.14
PDLIM5-223ENST00000627587 PEG10Q86TG7 708 aaKnown RBP7.94□□□□□ -1.14
PDLIM5-223ENST00000627587 MUC15Q8N387 334 aa7.94□□□□□ -1.14
PDLIM5-223ENST00000627587 CD177Q8N6Q3 437 aa7.94□□□□□ -1.14
PDLIM5-223ENST00000627587 Q8TCH9 128 aa7.94□□□□□ -1.14
PDLIM5-223ENST00000627587 MARCH1Q8TCQ1 289 aa7.94□□□□□ -1.14
PDLIM5-223ENST00000627587 ZNF2Q9BSG1 426 aaPredicted RBP7.94□□□□□ -1.14
PDLIM5-223ENST00000627587 SAP30LQ9HAJ7 183 aa7.94□□□□□ -1.14
PDLIM5-223ENST00000627587 MYOZ1Q9NP98 299 aaPredicted RBP7.94□□□□□ -1.14
PDLIM5-223ENST00000627587 ING3Q9NXR8 418 aa7.94□□□□□ -1.14
PDLIM5-223ENST00000627587 ZNF69Q9UC07 566 aa7.94□□□□□ -1.14
PDLIM5-223ENST00000627587 MGAT4AQ9UM21 535 aa7.94□□□□□ -1.14
PDLIM5-223ENST00000627587 OR5H14A6NHG9 310 aa7.93□□□□□ -1.14
PDLIM5-223ENST00000627587 LRRC30A6NM36 301 aa7.93□□□□□ -1.14
PDLIM5-223ENST00000627587 TRDCB7Z8K6 153 aa7.93□□□□□ -1.14
PDLIM5-223ENST00000627587 FABP7O15540 132 aa7.93□□□□□ -1.14
PDLIM5-223ENST00000627587 OR4E1P0C645 316 aa7.93□□□□□ -1.14
PDLIM5-223ENST00000627587 PSG2P11465 335 aa7.93□□□□□ -1.14
PDLIM5-223ENST00000627587 RCC1P18754 421 aaPredicted RBP7.93□□□□□ -1.14
PDLIM5-223ENST00000627587 CXCL3P19876 107 aa7.93□□□□□ -1.14
PDLIM5-223ENST00000627587 FPR2P25090 351 aa7.93□□□□□ -1.14
PDLIM5-223ENST00000627587 PRDX2P32119 198 aa7.93□□□□□ -1.14
PDLIM5-223ENST00000627587 NPY4RP50391 375 aa7.93□□□□□ -1.14
PDLIM5-223ENST00000627587 ATP5J2P56134 94 aa7.93□□□□□ -1.14
PDLIM5-223ENST00000627587 CD83Q01151 205 aa7.93□□□□□ -1.14
PDLIM5-223ENST00000627587 COL10A1Q03692 680 aa7.93□□□□□ -1.14
PDLIM5-223ENST00000627587 FCN2Q15485 313 aa7.93□□□□□ -1.14
PDLIM5-223ENST00000627587 SURF2Q15527 256 aaPredicted RBP7.93□□□□□ -1.14
PDLIM5-223ENST00000627587 IGSF11Q5DX21 431 aa7.93□□□□□ -1.14
PDLIM5-223ENST00000627587 ZNF626Q68DY1 528 aa7.93□□□□□ -1.14
PDLIM5-223ENST00000627587 ASCC1Q8N9N2 400 aaKnown RBP7.93□□□□□ -1.14
PDLIM5-223ENST00000627587 OR5T2Q8NGG2 359 aa7.93□□□□□ -1.14
PDLIM5-223ENST00000627587 FYTTD1Q96QD9 318 aaKnown RBP7.93□□□□□ -1.14
PDLIM5-223ENST00000627587 SHARPINQ9H0F6 387 aa7.93□□□□□ -1.14
PDLIM5-223ENST00000627587 C5orf66Q9H5L9 145 aa7.93□□□□□ -1.14
PDLIM5-223ENST00000627587 SEBOXQ9HB31 216 aaPredicted RBP7.93□□□□□ -1.14
PDLIM5-223ENST00000627587 RANGRFQ9HD47 186 aaPredicted RBP7.93□□□□□ -1.14
PDLIM5-223ENST00000627587 ZNF222Q9UK12 451 aa7.93□□□□□ -1.14
PDLIM5-223ENST00000627587 TRAPPC2LQ9UL33 140 aa7.93□□□□□ -1.14
PDLIM5-223ENST00000627587 GPR132Q9UNW8 380 aa7.93□□□□□ -1.14
PDLIM5-223ENST00000627587 IGHV3OR15-7A0A075B7D8 119 aa7.92□□□□□ -1.14
PDLIM5-223ENST00000627587 TMEM30CPA0ZSE6 113 aa7.92□□□□□ -1.14
PDLIM5-223ENST00000627587 ZNF737O75373 536 aa7.92□□□□□ -1.14
PDLIM5-223ENST00000627587 CYB5R3P00387 301 aaPredicted RBP7.92□□□□□ -1.14
PDLIM5-223ENST00000627587 SCTP09683 121 aa7.92□□□□□ -1.14
PDLIM5-223ENST00000627587 CTXN2P0C2S0 81 aa7.92□□□□□ -1.14
PDLIM5-223ENST00000627587 GABRA2P47869 451 aa7.92□□□□□ -1.14
PDLIM5-223ENST00000627587 OR3A1P47881 315 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms