RNA–Protein interactions for RNA: ENST00000624931.1

PCF11-207, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

Gene PCF11, Length 1,720 nt, Biotype TEC, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-207ENST00000624931 CEACAM16Q2WEN9 425 aa15.09■□□□□ 0.01
PCF11-207ENST00000624931 C9orf135Q5VTT2 229 aa15.09■□□□□ 0.01
PCF11-207ENST00000624931 P4HA3Q7Z4N8 544 aa15.09■□□□□ 0.01
PCF11-207ENST00000624931 GCNT2Q8N0V5 402 aa15.09■□□□□ 0.01
PCF11-207ENST00000624931 OSR2Q8N2R0 312 aa15.09■□□□□ 0.01
PCF11-207ENST00000624931 LINC00469Q8N7U9 141 aa15.09■□□□□ 0.01
PCF11-207ENST00000624931 FAM213BQ8TBF2 198 aa15.09■□□□□ 0.01
PCF11-207ENST00000624931 BSCL2Q96G97 398 aaPredicted RBP15.09■□□□□ 0.01
PCF11-207ENST00000624931 TOLLIPQ9H0E2 274 aa15.09■□□□□ 0.01
PCF11-207ENST00000624931 LIME1Q9H400 295 aa15.09■□□□□ 0.01
PCF11-207ENST00000624931 C11orf1Q9H5F2 150 aa15.09■□□□□ 0.01
PCF11-207ENST00000624931 SLC7A10Q9NS82 523 aa15.09■□□□□ 0.01
PCF11-207ENST00000624931 FBXO7Q9Y3I1 522 aa15.09■□□□□ 0.01
PCF11-207ENST00000624931 DMRT1Q9Y5R6 373 aa15.09■□□□□ 0.01
PCF11-207ENST00000624931 MED12LQ86YW9 2145 aa15.09■□□□□ 0.01
PCF11-207ENST00000624931 PRRC2CQ9Y520 2896 aaKnown RBP15.09■□□□□ 0.01
PCF11-207ENST00000624931 hCG_1809904A0A1W2PP81 198 aa15.09■□□□□ 0.01
PCF11-207ENST00000624931 A0A1W2PR64 198 aa15.09■□□□□ 0.01
PCF11-207ENST00000624931 A0A1W2PRV1 198 aa15.09■□□□□ 0.01
PCF11-207ENST00000624931 C5orf63A6NC05 138 aa15.09■□□□□ 0.01
PCF11-207ENST00000624931 IGHV2-70P01814 119 aa15.09■□□□□ 0.01
PCF11-207ENST00000624931 B4GALT1P15291 398 aa15.09■□□□□ 0.01
PCF11-207ENST00000624931 NQO2P16083 231 aa15.09■□□□□ 0.01
PCF11-207ENST00000624931 CRYGSP22914 178 aa15.09■□□□□ 0.01
PCF11-207ENST00000624931 FUT6P51993 359 aa15.09■□□□□ 0.01
PCF11-207ENST00000624931 CD81P60033 236 aa15.09■□□□□ 0.01
PCF11-207ENST00000624931 SP6Q3SY56 376 aa15.09■□□□□ 0.01
PCF11-207ENST00000624931 DNLZQ5SXM8 178 aa15.09■□□□□ 0.01
PCF11-207ENST00000624931 TMEM42Q69YG0 159 aa15.09■□□□□ 0.01
PCF11-207ENST00000624931 FAM180AQ6UWF9 173 aa15.09■□□□□ 0.01
PCF11-207ENST00000624931 Q6ZS49 121 aa15.09■□□□□ 0.01
PCF11-207ENST00000624931 CISD2Q8N5K1 135 aaKnown RBP15.09■□□□□ 0.01
PCF11-207ENST00000624931 RBMXL1Q96E39 390 aaKnown RBP15.09■□□□□ 0.01
PCF11-207ENST00000624931 PAPOLGQ9BWT3 736 aaKnown RBP15.09■□□□□ 0.01
PCF11-207ENST00000624931 PARP12Q9H0J9 701 aaKnown RBP15.09■□□□□ 0.01
PCF11-207ENST00000624931 PRSS50Q9UI38 385 aa15.09■□□□□ 0.01
PCF11-207ENST00000624931 SLC7A11Q9UPY5 501 aa15.09■□□□□ 0.01
PCF11-207ENST00000624931 ATMQ13315 3056 aa15.08■□□□□ 0
PCF11-207ENST00000624931 FAM90A10PA6NDY2 464 aa15.08■□□□□ 0
PCF11-207ENST00000624931 FAM90A18PA6NE21 464 aa15.08■□□□□ 0
PCF11-207ENST00000624931 FAM90A16PA6NEW6 464 aa15.08■□□□□ 0
PCF11-207ENST00000624931 FAM90A20PA6NIJ5 464 aa15.08■□□□□ 0
PCF11-207ENST00000624931 FAM90A8PA6NJQ4 464 aa15.08■□□□□ 0
PCF11-207ENST00000624931 FAM90A7PA6NKC0 464 aa15.08■□□□□ 0
PCF11-207ENST00000624931 FAM90A22PA8MWA6 464 aa15.08■□□□□ 0
PCF11-207ENST00000624931 FAM90A12PA8MX19 464 aa15.08■□□□□ 0
PCF11-207ENST00000624931 FAM90A5PA8MXJ8 464 aa15.08■□□□□ 0
PCF11-207ENST00000624931 FAM90A23PA8MXZ1 464 aa15.08■□□□□ 0
PCF11-207ENST00000624931 ZNF732B4DXR9 585 aa15.08■□□□□ 0
PCF11-207ENST00000624931 PHF1O43189 567 aaPredicted RBP15.08■□□□□ 0
PCF11-207ENST00000624931 PDCD6O75340 191 aa15.08■□□□□ 0
PCF11-207ENST00000624931 CRYABP02511 175 aaKnown RBP15.08■□□□□ 0
PCF11-207ENST00000624931 HSPB1P04792 205 aaKnown RBP15.08■□□□□ 0
PCF11-207ENST00000624931 CST2P09228 141 aa15.08■□□□□ 0
PCF11-207ENST00000624931 FAM90A15PP0C7V4 464 aa15.08■□□□□ 0
PCF11-207ENST00000624931 FAM90A13PP0C7W8 464 aa15.08■□□□□ 0
PCF11-207ENST00000624931 FAM90A14PP0C7W9 464 aa15.08■□□□□ 0
PCF11-207ENST00000624931 FAM90A24PP0C7X0 464 aa15.08■□□□□ 0
PCF11-207ENST00000624931 CDX1P47902 265 aaPredicted RBP15.08■□□□□ 0
PCF11-207ENST00000624931 RPS23P62266 143 aaKnown RBP15.08■□□□□ 0
PCF11-207ENST00000624931 ACSF3Q4G176 576 aaPredicted RBP15.08■□□□□ 0
PCF11-207ENST00000624931 FAM209BQ5JX69 171 aa15.08■□□□□ 0
PCF11-207ENST00000624931 ARHGAP21Q5T5U3 1957 aa15.08■□□□□ 0
PCF11-207ENST00000624931 SLC22A25Q6T423 547 aa15.08■□□□□ 0
PCF11-207ENST00000624931 TMEM182Q6ZP80 229 aaPredicted RBP15.08■□□□□ 0
PCF11-207ENST00000624931 FBXL14Q8N1E6 418 aa15.08■□□□□ 0
PCF11-207ENST00000624931 C9orf106Q8NAJ2 232 aa15.08■□□□□ 0
PCF11-207ENST00000624931 HSD17B11Q8NBQ5 300 aa15.08■□□□□ 0
PCF11-207ENST00000624931 OR52M1Q8NGK5 317 aa15.08■□□□□ 0
PCF11-207ENST00000624931 OR13D1Q8NGV5 346 aa15.08■□□□□ 0
PCF11-207ENST00000624931 OR2G3Q8NGZ4 309 aa15.08■□□□□ 0
PCF11-207ENST00000624931 REEP6Q96HR9 211 aa15.08■□□□□ 0
PCF11-207ENST00000624931 TMEM56Q96MV1 263 aa15.08■□□□□ 0
PCF11-207ENST00000624931 OPA3Q9H6K4 179 aa15.08■□□□□ 0
PCF11-207ENST00000624931 ZDHHC8Q9ULC8 765 aa15.08■□□□□ 0
PCF11-207ENST00000624931 TMEM56-RWDD3S4R434 201 aa15.08■□□□□ 0
PCF11-207ENST00000624931 C3orf85A0A1B0GTC6 90 aa15.07■□□□□ 0
PCF11-207ENST00000624931 B4DEV8 164 aa15.07■□□□□ 0
PCF11-207ENST00000624931 MSTNO14793 375 aa15.07■□□□□ 0
PCF11-207ENST00000624931 MPPED1O15442 326 aa15.07■□□□□ 0
PCF11-207ENST00000624931 TXNL1O43396 289 aa15.07■□□□□ 0
PCF11-207ENST00000624931 XRCC2O43543 280 aa15.07■□□□□ 0
PCF11-207ENST00000624931 OR13C7P0DN81 318 aa15.07■□□□□ 0
PCF11-207ENST00000624931 OPRM1P35372 400 aa15.07■□□□□ 0
PCF11-207ENST00000624931 NKX2-1P43699 371 aaPredicted RBP15.07■□□□□ 0
PCF11-207ENST00000624931 HTR5AP47898 357 aa15.07■□□□□ 0
PCF11-207ENST00000624931 FXYD4P59646 89 aa15.07■□□□□ 0
PCF11-207ENST00000624931 NHLH2Q02577 135 aa15.07■□□□□ 0
PCF11-207ENST00000624931 PHLDA2Q53GA4 152 aa15.07■□□□□ 0
PCF11-207ENST00000624931 OR10G4Q8NGN3 311 aa15.07■□□□□ 0
PCF11-207ENST00000624931 APH1AQ96BI3 265 aa15.07■□□□□ 0
PCF11-207ENST00000624931 MUCL1Q96DR8 90 aa15.07■□□□□ 0
PCF11-207ENST00000624931 C20orf24Q9BUV8 137 aa15.07■□□□□ 0
PCF11-207ENST00000624931 TMEM38BQ9NVV0 291 aa15.07■□□□□ 0
PCF11-207ENST00000624931 A0A1W2PPE2 198 aa15.06■□□□□ 0
PCF11-207ENST00000624931 CLEC18AA5D8T8 446 aa15.06■□□□□ 0
PCF11-207ENST00000624931 PPIHO43447 177 aaKnown RBP15.06■□□□□ 0
PCF11-207ENST00000624931 ARG1P05089 322 aa15.06■□□□□ 0
PCF11-207ENST00000624931 VAMP2P63027 116 aa15.06■□□□□ 0
PCF11-207ENST00000624931 KIAA0141Q14154 515 aaPredicted RBP15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms