RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 TRAF3IP2O43734 574 aaPredicted RBP10.78□□□□□ -0.68
LITAF-221ENST00000622633 TRAPPC6AO75865 159 aa10.78□□□□□ -0.68
LITAF-221ENST00000622633 HIST1H1DP16402 221 aaKnown RBP10.78□□□□□ -0.68
LITAF-221ENST00000622633 IGFBP4P22692 258 aa10.78□□□□□ -0.68
LITAF-221ENST00000622633 RAB32Q13637 225 aa10.78□□□□□ -0.68
LITAF-221ENST00000622633 ENDOGQ14249 297 aaKnown RBP10.78□□□□□ -0.68
LITAF-221ENST00000622633 ZNF880Q6PDB4 577 aa10.78□□□□□ -0.68
LITAF-221ENST00000622633 SLC25A47Q6Q0C1 308 aa10.78□□□□□ -0.68
LITAF-221ENST00000622633 TOMM20LQ6UXN7 152 aa10.78□□□□□ -0.68
LITAF-221ENST00000622633 ZNF66Q6ZN08 573 aa10.78□□□□□ -0.68
LITAF-221ENST00000622633 CLEC18CQ8NCF0 446 aa10.78□□□□□ -0.68
LITAF-221ENST00000622633 ARHGAP5-AS1Q96IT6 56 aa10.78□□□□□ -0.68
LITAF-221ENST00000622633 GPER1Q99527 375 aa10.78□□□□□ -0.68
LITAF-221ENST00000622633 TXN2Q99757 166 aa10.78□□□□□ -0.68
LITAF-221ENST00000622633 C5orf66Q9H5L9 145 aa10.78□□□□□ -0.68
LITAF-221ENST00000622633 RYDENQ9NUL5 291 aaKnown RBP10.78□□□□□ -0.68
LITAF-221ENST00000622633 FBXL17Q9UF56 701 aa10.78□□□□□ -0.68
LITAF-221ENST00000622633 IGLV3-12A0A075B6K2 115 aa10.77□□□□□ -0.69
LITAF-221ENST00000622633 E9PLN8 166 aa10.77□□□□□ -0.69
LITAF-221ENST00000622633 SLC25A17O43808 307 aa10.77□□□□□ -0.69
LITAF-221ENST00000622633 PRRX1P54821 245 aa10.77□□□□□ -0.69
LITAF-221ENST00000622633 HIST1H3AP68431 136 aa10.77□□□□□ -0.69
LITAF-221ENST00000622633 TPTE2P1Q5T6R2 138 aa10.77□□□□□ -0.69
LITAF-221ENST00000622633 BHLHA15Q7RTS1 189 aaPredicted RBP10.77□□□□□ -0.69
LITAF-221ENST00000622633 KCNG3Q8TAE7 436 aa10.77□□□□□ -0.69
LITAF-221ENST00000622633 DYRK2Q92630 601 aa10.77□□□□□ -0.69
LITAF-221ENST00000622633 TMEM230Q96A57 120 aa10.77□□□□□ -0.69
LITAF-221ENST00000622633 TMEM59Q9BXS4 323 aa10.77□□□□□ -0.69
LITAF-221ENST00000622633 HIPK2Q9H2X6 1198 aa10.77□□□□□ -0.69
LITAF-221ENST00000622633 PNRC2Q9NPJ4 139 aaKnown RBP10.77□□□□□ -0.69
LITAF-221ENST00000622633 TMEM242Q9NWH2 141 aa10.77□□□□□ -0.69
LITAF-221ENST00000622633 RBFOX3A6NFN3 312 aa10.77□□□□□ -0.69
LITAF-221ENST00000622633 SPEM2Q0P670 501 aa10.77□□□□□ -0.69
LITAF-221ENST00000622633 SLAQ13239 276 aa10.77□□□□□ -0.69
LITAF-221ENST00000622633 TMEM176BQ3YBM2 270 aaPredicted RBP10.77□□□□□ -0.69
LITAF-221ENST00000622633 SLC25A53Q5H9E4 307 aa10.77□□□□□ -0.69
LITAF-221ENST00000622633 NUDT16L1Q9BRJ7 211 aaKnown RBP10.77□□□□□ -0.69
LITAF-221ENST00000622633 NIPSNAP3BQ9BS92 247 aa10.77□□□□□ -0.69
LITAF-221ENST00000622633 ST6GALNAC5Q9BVH7 336 aa10.77□□□□□ -0.69
LITAF-221ENST00000622633 GPR132Q9UNW8 380 aa10.77□□□□□ -0.69
LITAF-221ENST00000622633 LAMTOR2Q9Y2Q5 125 aa10.77□□□□□ -0.69
LITAF-221ENST00000622633 IGKV1-9A0A0C4DH69 117 aa10.76□□□□□ -0.69
LITAF-221ENST00000622633 ZFAND5O76080 213 aa10.76□□□□□ -0.69
LITAF-221ENST00000622633 FAHP16930 419 aa10.76□□□□□ -0.69
LITAF-221ENST00000622633 CD33P20138 364 aa10.76□□□□□ -0.69
LITAF-221ENST00000622633 TAS2R31P59538 309 aa10.76□□□□□ -0.69
LITAF-221ENST00000622633 CCL20P78556 96 aa10.76□□□□□ -0.69
LITAF-221ENST00000622633 RHOGP84095 191 aa10.76□□□□□ -0.69
LITAF-221ENST00000622633 RBPJQ06330 500 aa10.76□□□□□ -0.69
LITAF-221ENST00000622633 ARFRP1Q13795 201 aa10.76□□□□□ -0.69
LITAF-221ENST00000622633 TMEM183BQ1AE95 376 aa10.76□□□□□ -0.69
LITAF-221ENST00000622633 TMEM128Q5BJH2 165 aa10.76□□□□□ -0.69
LITAF-221ENST00000622633 LCN10Q6JVE6 187 aa10.76□□□□□ -0.69
LITAF-221ENST00000622633 PRR27Q6MZM9 219 aa10.76□□□□□ -0.69
LITAF-221ENST00000622633 C1QL2Q7Z5L3 287 aa10.76□□□□□ -0.69
LITAF-221ENST00000622633 LFNGQ8NES3 379 aa10.76□□□□□ -0.69
LITAF-221ENST00000622633 RNF138Q8WVD3 245 aa10.76□□□□□ -0.69
LITAF-221ENST00000622633 LIN37Q96GY3 246 aaPredicted RBP10.76□□□□□ -0.69
LITAF-221ENST00000622633 MS4A10Q96PG2 267 aa10.76□□□□□ -0.69
LITAF-221ENST00000622633 CABLES2Q9BTV7 478 aa10.76□□□□□ -0.69
LITAF-221ENST00000622633 MOB1AQ9H8S9 216 aa10.76□□□□□ -0.69
LITAF-221ENST00000622633 WDR87Q6ZQQ6 2873 aa10.76□□□□□ -0.69
LITAF-221ENST00000622633 ASCC3Q8N3C0 2202 aaKnown RBP10.76□□□□□ -0.69
LITAF-221ENST00000622633 B4DEV8 164 aa10.76□□□□□ -0.69
LITAF-221ENST00000622633 SDCBPO00560 298 aaPredicted RBP10.76□□□□□ -0.69
LITAF-221ENST00000622633 SCRG1O75711 98 aa10.76□□□□□ -0.69
LITAF-221ENST00000622633 SEC11BP0C7V7 166 aa10.76□□□□□ -0.69
LITAF-221ENST00000622633 PSG1P11464 419 aa10.76□□□□□ -0.69
LITAF-221ENST00000622633 ZNF43P17038 809 aa10.76□□□□□ -0.69
LITAF-221ENST00000622633 S100A10P60903 97 aa10.76□□□□□ -0.69
LITAF-221ENST00000622633 VAX1Q5SQQ9 334 aa10.76□□□□□ -0.69
LITAF-221ENST00000622633 CLEC18BQ6UXF7 455 aa10.76□□□□□ -0.69
LITAF-221ENST00000622633 CPEB2Q7Z5Q1 589 aaKnown RBP10.76□□□□□ -0.69
LITAF-221ENST00000622633 CYB561D1Q8N8Q1 229 aa10.76□□□□□ -0.69
LITAF-221ENST00000622633 OR2M3Q8NG83 312 aa10.76□□□□□ -0.69
LITAF-221ENST00000622633 TMEM170AQ8WVE7 144 aa10.76□□□□□ -0.69
LITAF-221ENST00000622633 REEP6Q96HR9 211 aa10.76□□□□□ -0.69
LITAF-221ENST00000622633 SMIM3Q9BZL3 60 aa10.76□□□□□ -0.69
LITAF-221ENST00000622633 FUT9Q9Y231 359 aa10.76□□□□□ -0.69
LITAF-221ENST00000622633 RALGAPA1Q6GYQ0 2036 aa10.76□□□□□ -0.69
LITAF-221ENST00000622633 RTTNQ86VV8 2226 aa10.75□□□□□ -0.69
LITAF-221ENST00000622633 GALR2O43603 387 aaPredicted RBP10.75□□□□□ -0.69
LITAF-221ENST00000622633 AMY2BP19961 511 aa10.75□□□□□ -0.69
LITAF-221ENST00000622633 RND3P61587 244 aa10.75□□□□□ -0.69
LITAF-221ENST00000622633 IL24Q13007 206 aa10.75□□□□□ -0.69
LITAF-221ENST00000622633 OPN5Q6U736 354 aa10.75□□□□□ -0.69
LITAF-221ENST00000622633 OR5H2Q8NGV7 314 aa10.75□□□□□ -0.69
LITAF-221ENST00000622633 ERGIC1Q969X5 290 aa10.75□□□□□ -0.69
LITAF-221ENST00000622633 OXGR1Q96P68 337 aa10.75□□□□□ -0.69
LITAF-221ENST00000622633 RTBDNQ9BSG5 229 aaPredicted RBP10.75□□□□□ -0.69
LITAF-221ENST00000622633 ANAPC10Q9UM13 185 aa10.75□□□□□ -0.69
LITAF-221ENST00000622633 SFT2D2O95562 160 aa10.75□□□□□ -0.69
LITAF-221ENST00000622633 HLA-DRB3P79483 266 aa10.75□□□□□ -0.69
LITAF-221ENST00000622633 RSPO4Q2I0M5 234 aaPredicted RBP10.75□□□□□ -0.69
LITAF-221ENST00000622633 ANKRD55Q3KP44 614 aa10.75□□□□□ -0.69
LITAF-221ENST00000622633 OR51T1Q8NGJ9 327 aa10.75□□□□□ -0.69
LITAF-221ENST00000622633 OR13G1Q8NGZ3 307 aa10.75□□□□□ -0.69
LITAF-221ENST00000622633 OR10A2Q9H208 303 aa10.75□□□□□ -0.69
LITAF-221ENST00000622633 AKIRIN1Q9H9L7 192 aaPredicted RBP10.75□□□□□ -0.69
LITAF-221ENST00000622633 ELL3Q9HB65 397 aaPredicted RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms