RNA–Protein interactions for RNA: ENST00000622629.4

MSH6-215, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 4,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-215ENST00000622629 PROCRQ9UNN8 238 aa11.11□□□□□ -0.63
MSH6-215ENST00000622629 POMT1Q9Y6A1 747 aa11.11□□□□□ -0.63
MSH6-215ENST00000622629 A0A0A6YYD4 124 aa11.11□□□□□ -0.63
MSH6-215ENST00000622629 BTBD17A6NE02 478 aa11.11□□□□□ -0.63
MSH6-215ENST00000622629 ZNF705FA8MVS1 300 aaPredicted RBP11.11□□□□□ -0.63
MSH6-215ENST00000622629 SYNGR2O43760 224 aa11.11□□□□□ -0.63
MSH6-215ENST00000622629 ACTL6AO96019 429 aa11.11□□□□□ -0.63
MSH6-215ENST00000622629 ZNF705DP0CH99 300 aaPredicted RBP11.11□□□□□ -0.63
MSH6-215ENST00000622629 ZNF705BP0CI00 300 aaPredicted RBP11.11□□□□□ -0.63
MSH6-215ENST00000622629 ASPHD2Q6ICH7 369 aa11.11□□□□□ -0.63
MSH6-215ENST00000622629 Q8IYB0 196 aa11.11□□□□□ -0.63
MSH6-215ENST00000622629 PSG11Q9UQ72 335 aa11.11□□□□□ -0.63
MSH6-215ENST00000622629 TIMM8BQ9Y5J9 83 aaPredicted RBP11.11□□□□□ -0.63
MSH6-215ENST00000622629 C5orf63A6NC05 138 aa11.1□□□□□ -0.63
MSH6-215ENST00000622629 B4E171 279 aa11.1□□□□□ -0.63
MSH6-215ENST00000622629 PPP5D1E7EU14 171 aa11.1□□□□□ -0.63
MSH6-215ENST00000622629 M0R1B8 84 aa11.1□□□□□ -0.63
MSH6-215ENST00000622629 TSPAN7P41732 249 aa11.1□□□□□ -0.63
MSH6-215ENST00000622629 SUCLG1P53597 346 aaKnown RBP11.1□□□□□ -0.63
MSH6-215ENST00000622629 UBE2G2P60604 165 aa11.1□□□□□ -0.63
MSH6-215ENST00000622629 EIF3IQ13347 325 aaKnown RBP11.1□□□□□ -0.63
MSH6-215ENST00000622629 MRPL41Q8IXM3 137 aaKnown RBP11.1□□□□□ -0.63
MSH6-215ENST00000622629 IMMP1LQ96LU5 166 aa11.1□□□□□ -0.63
MSH6-215ENST00000622629 OR2J1Q9GZK6 312 aa11.1□□□□□ -0.63
MSH6-215ENST00000622629 RCC2Q9P258 522 aaKnown RBP11.1□□□□□ -0.63
MSH6-215ENST00000622629 H0YIZ8 118 aa11.1□□□□□ -0.63
MSH6-215ENST00000622629 UMODP07911 640 aa11.1□□□□□ -0.63
MSH6-215ENST00000622629 CYC1P08574 325 aa11.1□□□□□ -0.63
MSH6-215ENST00000622629 FGF7P21781 194 aa11.1□□□□□ -0.63
MSH6-215ENST00000622629 SOX8P57073 446 aa11.1□□□□□ -0.63
MSH6-215ENST00000622629 SMIM21Q3B7S5 101 aa11.1□□□□□ -0.63
MSH6-215ENST00000622629 KCNIP4Q6PIL6 250 aa11.1□□□□□ -0.63
MSH6-215ENST00000622629 SLC16A13Q7RTY0 426 aa11.1□□□□□ -0.63
MSH6-215ENST00000622629 PPP1R32Q7Z5V6 425 aa11.1□□□□□ -0.63
MSH6-215ENST00000622629 TMEM252Q8N6L7 170 aa11.1□□□□□ -0.63
MSH6-215ENST00000622629 OR1K1Q8NGR3 316 aa11.1□□□□□ -0.63
MSH6-215ENST00000622629 LURAP1Q96LR2 239 aa11.1□□□□□ -0.63
MSH6-215ENST00000622629 PSG2P11465 335 aa11.1□□□□□ -0.63
MSH6-215ENST00000622629 SLC38A11Q08AI6 406 aa11.1□□□□□ -0.63
MSH6-215ENST00000622629 IZUMO4Q1ZYL8 232 aa11.1□□□□□ -0.63
MSH6-215ENST00000622629 RIPPLY2Q5TAB7 128 aa11.1□□□□□ -0.63
MSH6-215ENST00000622629 MDP1Q86V88 176 aa11.1□□□□□ -0.63
MSH6-215ENST00000622629 TMEM54Q969K7 222 aa11.1□□□□□ -0.63
MSH6-215ENST00000622629 GPR87Q9BY21 358 aa11.1□□□□□ -0.63
MSH6-215ENST00000622629 OR2W1Q9Y3N9 320 aa11.1□□□□□ -0.63
MSH6-215ENST00000622629 A0A1W2PPQ1 181 aa11.09□□□□□ -0.63
MSH6-215ENST00000622629 S100A8P05109 93 aa11.09□□□□□ -0.63
MSH6-215ENST00000622629 BMP5P22003 454 aa11.09□□□□□ -0.63
MSH6-215ENST00000622629 ZNF528Q3MIS6 628 aa11.09□□□□□ -0.63
MSH6-215ENST00000622629 Q3ZCU0 254 aa11.09□□□□□ -0.63
MSH6-215ENST00000622629 ZNF610Q8N9Z0 462 aa11.09□□□□□ -0.63
MSH6-215ENST00000622629 H1FXQ92522 213 aaKnown RBP11.09□□□□□ -0.63
MSH6-215ENST00000622629 DYNLRB1Q9NP97 96 aa11.09□□□□□ -0.63
MSH6-215ENST00000622629 HSF4Q9ULV5 492 aa11.09□□□□□ -0.63
MSH6-215ENST00000622629 A8MXE2 369 aa11.09□□□□□ -0.63
MSH6-215ENST00000622629 SPRY3O43610 288 aa11.09□□□□□ -0.63
MSH6-215ENST00000622629 GAPDHP04406 335 aaKnown RBP11.09□□□□□ -0.63
MSH6-215ENST00000622629 COX5AP20674 150 aa11.09□□□□□ -0.63
MSH6-215ENST00000622629 BTNL3Q6UXE8 466 aa11.09□□□□□ -0.63
MSH6-215ENST00000622629 CALHM1Q8IU99 346 aa11.09□□□□□ -0.63
MSH6-215ENST00000622629 FADS6Q8N9I5 356 aa11.09□□□□□ -0.63
MSH6-215ENST00000622629 ABHD5Q8WTS1 349 aa11.09□□□□□ -0.63
MSH6-215ENST00000622629 RAB39BQ96DA2 213 aa11.09□□□□□ -0.63
MSH6-215ENST00000622629 LYZL4Q96KX0 146 aa11.09□□□□□ -0.63
MSH6-215ENST00000622629 RNF126Q9BV68 326 aa11.09□□□□□ -0.63
MSH6-215ENST00000622629 ACTR3CQ9C0K3 210 aaPredicted RBP11.09□□□□□ -0.63
MSH6-215ENST00000622629 SLC25A22Q9H936 323 aa11.09□□□□□ -0.63
MSH6-215ENST00000622629 J3QT63 122 aa11.09□□□□□ -0.63
MSH6-215ENST00000622629 M0R1X1 148 aa11.09□□□□□ -0.63
MSH6-215ENST00000622629 CELA3AP09093 270 aa11.09□□□□□ -0.63
MSH6-215ENST00000622629 HNF1AP20823 631 aa11.09□□□□□ -0.63
MSH6-215ENST00000622629 FGF12P61328 243 aa11.09□□□□□ -0.63
MSH6-215ENST00000622629 SLC25A53Q5H9E4 307 aa11.09□□□□□ -0.63
MSH6-215ENST00000622629 MOB3AQ96BX8 217 aa11.09□□□□□ -0.63
MSH6-215ENST00000622629 IGKV1D-8A0A087WSZ0 117 aa11.08□□□□□ -0.64
MSH6-215ENST00000622629 PMS2P1A4D2B8 440 aa11.08□□□□□ -0.64
MSH6-215ENST00000622629 MAP1LC3B2A6NCE7 125 aa11.08□□□□□ -0.64
MSH6-215ENST00000622629 SULT1A1P50225 295 aa11.08□□□□□ -0.64
MSH6-215ENST00000622629 IL24Q13007 206 aa11.08□□□□□ -0.64
MSH6-215ENST00000622629 TGIF1Q15583 401 aa11.08□□□□□ -0.64
MSH6-215ENST00000622629 CEACAM21Q3KPI0 293 aa11.08□□□□□ -0.64
MSH6-215ENST00000622629 NCR3LG1Q68D85 454 aa11.08□□□□□ -0.64
MSH6-215ENST00000622629 MOB1BQ7L9L4 216 aa11.08□□□□□ -0.64
MSH6-215ENST00000622629 DEFB124Q8NES8 71 aa11.08□□□□□ -0.64
MSH6-215ENST00000622629 RBM14Q96PK6 669 aaKnown RBP11.08□□□□□ -0.64
MSH6-215ENST00000622629 MAP1LC3BQ9GZQ8 125 aa11.08□□□□□ -0.64
MSH6-215ENST00000622629 PRSS50Q9UI38 385 aa11.08□□□□□ -0.64
MSH6-215ENST00000622629 LOC105371267A0A1B0GV96 52 aa11.08□□□□□ -0.64
MSH6-215ENST00000622629 LDLRAD4O15165 306 aa11.08□□□□□ -0.64
MSH6-215ENST00000622629 AGFG2O95081 481 aa11.08□□□□□ -0.64
MSH6-215ENST00000622629 ZNF83P51522 516 aa11.08□□□□□ -0.64
MSH6-215ENST00000622629 HTD2P86397 168 aa11.08□□□□□ -0.64
MSH6-215ENST00000622629 FOXO1Q12778 655 aa11.08□□□□□ -0.64
MSH6-215ENST00000622629 FBXW9Q5XUX1 488 aa11.08□□□□□ -0.64
MSH6-215ENST00000622629 TMEM230Q96A57 120 aa11.08□□□□□ -0.64
MSH6-215ENST00000622629 SH3BGRL3Q9H299 93 aa11.08□□□□□ -0.64
MSH6-215ENST00000622629 MSL2Q9HCI7 577 aa11.08□□□□□ -0.64
MSH6-215ENST00000622629 LAMP3Q9UQV4 416 aa11.08□□□□□ -0.64
MSH6-215ENST00000622629 TICRRQ7Z2Z1 1910 aa11.08□□□□□ -0.64
MSH6-215ENST00000622629 MDFIC2A0A1B0GVS7 189 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms