RNA–Protein interactions for RNA: ENST00000621016.4

CDH1-214, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-214ENST00000621016 GGCTO75223 188 aaKnown RBP9.28□□□□□ -0.92
CDH1-214ENST00000621016 CHRM2P08172 466 aa9.28□□□□□ -0.92
CDH1-214ENST00000621016 FPR2P25090 351 aa9.28□□□□□ -0.92
CDH1-214ENST00000621016 PTGDSP41222 190 aa9.28□□□□□ -0.92
CDH1-214ENST00000621016 KLF3P57682 345 aaPredicted RBP9.28□□□□□ -0.92
CDH1-214ENST00000621016 SELENOTP62341 195 aa9.28□□□□□ -0.92
CDH1-214ENST00000621016 SUPT4H1P63272 117 aaKnown RBP9.28□□□□□ -0.92
CDH1-214ENST00000621016 ZP4Q12836 540 aa9.28□□□□□ -0.92
CDH1-214ENST00000621016 TPTE2P1Q5T6R2 138 aa9.28□□□□□ -0.92
CDH1-214ENST00000621016 SUMF1Q8NBK3 374 aa9.28□□□□□ -0.92
CDH1-214ENST00000621016 FAM213BQ8TBF2 198 aa9.28□□□□□ -0.92
CDH1-214ENST00000621016 PRRX2Q99811 253 aa9.28□□□□□ -0.92
CDH1-214ENST00000621016 SLC35B3Q9H1N7 401 aa9.28□□□□□ -0.92
CDH1-214ENST00000621016 PLEKHA2Q9HB19 425 aa9.28□□□□□ -0.92
CDH1-214ENST00000621016 C14orf166Q9Y224 244 aaKnown RBP9.28□□□□□ -0.92
CDH1-214ENST00000621016 ICE1Q9Y2F5 2266 aa9.28□□□□□ -0.92
CDH1-214ENST00000621016 HEATR1Q9H583 2144 aaKnown RBP9.28□□□□□ -0.92
CDH1-214ENST00000621016 SLC25A4P12235 298 aa9.28□□□□□ -0.92
CDH1-214ENST00000621016 CD81P60033 236 aa9.28□□□□□ -0.92
CDH1-214ENST00000621016 NHLH1Q02575 133 aa9.28□□□□□ -0.92
CDH1-214ENST00000621016 HLA-BQ31612 363 aa9.28□□□□□ -0.92
CDH1-214ENST00000621016 WDR74Q6RFH5 385 aaPredicted RBP9.28□□□□□ -0.92
CDH1-214ENST00000621016 DOK3Q7L591 496 aa9.28□□□□□ -0.92
CDH1-214ENST00000621016 VASH2Q86V25 355 aa9.28□□□□□ -0.92
CDH1-214ENST00000621016 SULF2Q8IWU5 870 aa9.28□□□□□ -0.92
CDH1-214ENST00000621016 GBGT1Q8N5D6 347 aa9.28□□□□□ -0.92
CDH1-214ENST00000621016 ZDHHC22Q8N966 263 aa9.28□□□□□ -0.92
CDH1-214ENST00000621016 OR1P1Q8NH06 330 aa9.28□□□□□ -0.92
CDH1-214ENST00000621016 OR14L1PQ8NHC6 308 aa9.28□□□□□ -0.92
CDH1-214ENST00000621016 ZNF596Q8TC21 504 aa9.28□□□□□ -0.92
CDH1-214ENST00000621016 RTBDNQ9BSG5 229 aaPredicted RBP9.28□□□□□ -0.92
CDH1-214ENST00000621016 ZNF700Q9H0M5 742 aa9.28□□□□□ -0.92
CDH1-214ENST00000621016 PITPNC1Q9UKF7 332 aa9.28□□□□□ -0.92
CDH1-214ENST00000621016 ZNF891A8MT65 544 aaPredicted RBP9.27□□□□□ -0.93
CDH1-214ENST00000621016 NDUFB8O95169 186 aa9.27□□□□□ -0.93
CDH1-214ENST00000621016 MSR1P21757 451 aa9.27□□□□□ -0.93
CDH1-214ENST00000621016 OMGP23515 440 aa9.27□□□□□ -0.93
CDH1-214ENST00000621016 DUSP1P28562 367 aa9.27□□□□□ -0.93
CDH1-214ENST00000621016 SHBQ15464 509 aa9.27□□□□□ -0.93
CDH1-214ENST00000621016 PIGYQ3MUY2 71 aa9.27□□□□□ -0.93
CDH1-214ENST00000621016 LYPD6Q86Y78 171 aa9.27□□□□□ -0.93
CDH1-214ENST00000621016 DTWD2Q8NBA8 298 aa9.27□□□□□ -0.93
CDH1-214ENST00000621016 OR9K2Q8NGE7 335 aa9.27□□□□□ -0.93
CDH1-214ENST00000621016 OR4X1Q8NH49 305 aa9.27□□□□□ -0.93
CDH1-214ENST00000621016 HAS2Q92819 552 aa9.27□□□□□ -0.93
CDH1-214ENST00000621016 SLC35E1Q96K37 410 aa9.27□□□□□ -0.93
CDH1-214ENST00000621016 C1orf147Q96MC9 270 aaPredicted RBP9.27□□□□□ -0.93
CDH1-214ENST00000621016 ACTR3CQ9C0K3 210 aaPredicted RBP9.27□□□□□ -0.93
CDH1-214ENST00000621016 ZNF703Q9H7S9 590 aaPredicted RBP9.27□□□□□ -0.93
CDH1-214ENST00000621016 GPR132Q9UNW8 380 aa9.27□□□□□ -0.93
CDH1-214ENST00000621016 RPL36A-HNRNPH2H7BZ11 118 aa9.27□□□□□ -0.93
CDH1-214ENST00000621016 SNCAP37840 140 aa9.27□□□□□ -0.93
CDH1-214ENST00000621016 RPUSD3Q6P087 351 aaKnown RBP9.27□□□□□ -0.93
CDH1-214ENST00000621016 TMEM183AQ8IXX5 376 aa9.27□□□□□ -0.93
CDH1-214ENST00000621016 PIGCQ92535 297 aa9.27□□□□□ -0.93
CDH1-214ENST00000621016 DOCK11Q5JSL3 2073 aa9.26□□□□□ -0.93
CDH1-214ENST00000621016 A0A0G2JMM0 328 aa9.26□□□□□ -0.93
CDH1-214ENST00000621016 A0A1W2PPB8 328 aa9.26□□□□□ -0.93
CDH1-214ENST00000621016 A0A1W2PRS3 328 aa9.26□□□□□ -0.93
CDH1-214ENST00000621016 KIR3DP1A8MWS1 328 aa9.26□□□□□ -0.93
CDH1-214ENST00000621016 CCL20P78556 96 aa9.26□□□□□ -0.93
CDH1-214ENST00000621016 HMGN3Q15651 99 aa9.26□□□□□ -0.93
CDH1-214ENST00000621016 MPV17LQ2QL34 196 aa9.26□□□□□ -0.93
CDH1-214ENST00000621016 ABCA11PQ4W5N1 156 aa9.26□□□□□ -0.93
CDH1-214ENST00000621016 TMEM268Q5VZI3 342 aa9.26□□□□□ -0.93
CDH1-214ENST00000621016 LYSMD4Q5XG99 296 aa9.26□□□□□ -0.93
CDH1-214ENST00000621016 ZNF709Q8N972 641 aa9.26□□□□□ -0.93
CDH1-214ENST00000621016 GJC3Q8NFK1 279 aa9.26□□□□□ -0.93
CDH1-214ENST00000621016 PECRQ9BY49 303 aa9.26□□□□□ -0.93
CDH1-214ENST00000621016 A0A096LPE4 126 aa9.26□□□□□ -0.93
CDH1-214ENST00000621016 A0A1W2PPZ6 126 aa9.26□□□□□ -0.93
CDH1-214ENST00000621016 SFT2D2O95562 160 aa9.26□□□□□ -0.93
CDH1-214ENST00000621016 TK1P04183 234 aa9.26□□□□□ -0.93
CDH1-214ENST00000621016 COMPP49747 757 aaPredicted RBP9.26□□□□□ -0.93
CDH1-214ENST00000621016 ERVS71-1P61550 626 aa9.26□□□□□ -0.93
CDH1-214ENST00000621016 SLC35A1P78382 337 aa9.26□□□□□ -0.93
CDH1-214ENST00000621016 RAB35Q15286 201 aa9.26□□□□□ -0.93
CDH1-214ENST00000621016 EIF5AL1Q6IS14 154 aaKnown RBP9.26□□□□□ -0.93
CDH1-214ENST00000621016 SLC25A47Q6Q0C1 308 aa9.26□□□□□ -0.93
CDH1-214ENST00000621016 MRGPRDQ8TDS7 321 aa9.26□□□□□ -0.93
CDH1-214ENST00000621016 MRPL24Q96A35 216 aaKnown RBP9.26□□□□□ -0.93
CDH1-214ENST00000621016 MEGF9Q9H1U4 602 aa9.26□□□□□ -0.93
CDH1-214ENST00000621016 PNRC2Q9NPJ4 139 aaKnown RBP9.26□□□□□ -0.93
CDH1-214ENST00000621016 CHCHD2Q9Y6H1 151 aaPredicted RBP9.26□□□□□ -0.93
CDH1-214ENST00000621016 ARHGAP21Q5T5U3 1957 aa9.26□□□□□ -0.93
CDH1-214ENST00000621016 A0A0J9YW62 118 aa9.26□□□□□ -0.93
CDH1-214ENST00000621016 F8VVB4 439 aa9.26□□□□□ -0.93
CDH1-214ENST00000621016 F8VWA3 439 aa9.26□□□□□ -0.93
CDH1-214ENST00000621016 DHHO43323 396 aa9.26□□□□□ -0.93
CDH1-214ENST00000621016 OR7C1O76099 320 aaPredicted RBP9.26□□□□□ -0.93
CDH1-214ENST00000621016 PDGFBP01127 241 aaPredicted RBP9.26□□□□□ -0.93
CDH1-214ENST00000621016 CD55P08174 381 aa9.26□□□□□ -0.93
CDH1-214ENST00000621016 RAB1AP62820 205 aa9.26□□□□□ -0.93
CDH1-214ENST00000621016 GNB2P62879 340 aa9.26□□□□□ -0.93
CDH1-214ENST00000621016 C1orf194Q5T5A4 169 aa9.26□□□□□ -0.93
CDH1-214ENST00000621016 NUP210LQ5VU65 1888 aa9.26□□□□□ -0.93
CDH1-214ENST00000621016 Q7L0L9 218 aa9.26□□□□□ -0.93
CDH1-214ENST00000621016 SAXO1Q8IYX7 474 aa9.26□□□□□ -0.93
CDH1-214ENST00000621016 OR11L1Q8NGX0 322 aa9.26□□□□□ -0.93
CDH1-214ENST00000621016 SAT2Q96F10 170 aaPredicted RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms