RNA–Protein interactions for RNA: ENST00000616939.4

GPN1-212, Transcript of GPN-loop GTPase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GPN1, Length 1,832 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-212ENST00000616939 TMEM41BQ5BJD5 291 aa13.36□□□□□ -0.27
GPN1-212ENST00000616939 PLCXD3Q63HM9 321 aa13.36□□□□□ -0.27
GPN1-212ENST00000616939 SLC25A24Q6NUK1 477 aa13.36□□□□□ -0.27
GPN1-212ENST00000616939 ZNF774Q6NX45 483 aa13.36□□□□□ -0.27
GPN1-212ENST00000616939 FIP1L1Q6UN15 594 aaKnown RBP13.36□□□□□ -0.27
GPN1-212ENST00000616939 SYT13Q7L8C5 426 aa13.36□□□□□ -0.27
GPN1-212ENST00000616939 ZNF525Q8N782 197 aa13.36□□□□□ -0.27
GPN1-212ENST00000616939 CPT1CQ8TCG5 803 aa13.36□□□□□ -0.27
GPN1-212ENST00000616939 TMEM170AQ8WVE7 144 aa13.36□□□□□ -0.27
GPN1-212ENST00000616939 SPSB4Q96A44 273 aa13.36□□□□□ -0.27
GPN1-212ENST00000616939 TMEM38BQ9NVV0 291 aa13.36□□□□□ -0.27
GPN1-212ENST00000616939 OR14J1Q9UGF5 321 aa13.36□□□□□ -0.27
GPN1-212ENST00000616939 TIMM9Q9Y5J7 89 aa13.36□□□□□ -0.27
GPN1-212ENST00000616939 TRBV6-6A0A0A6YYG2 114 aa13.35□□□□□ -0.27
GPN1-212ENST00000616939 IGKV1D-13A0A0B4J2D9 117 aa13.35□□□□□ -0.27
GPN1-212ENST00000616939 ZFP92A6NM28 416 aa13.35□□□□□ -0.27
GPN1-212ENST00000616939 IGKV1-13P0DP09 117 aa13.35□□□□□ -0.27
GPN1-212ENST00000616939 LRRC75BQ2VPJ9 315 aa13.35□□□□□ -0.27
GPN1-212ENST00000616939 NCR3LG1Q68D85 454 aa13.35□□□□□ -0.27
GPN1-212ENST00000616939 ZNF664Q8N3J9 261 aa13.35□□□□□ -0.27
GPN1-212ENST00000616939 LSM10Q969L4 123 aaKnown RBP13.35□□□□□ -0.27
GPN1-212ENST00000616939 DDA1Q9BW61 102 aa13.35□□□□□ -0.27
GPN1-212ENST00000616939 KNL1Q8NG31 2342 aa13.35□□□□□ -0.27
GPN1-212ENST00000616939 TMEM250H0YL14 139 aa13.34□□□□□ -0.27
GPN1-212ENST00000616939 OR7C1O76099 320 aaPredicted RBP13.34□□□□□ -0.27
GPN1-212ENST00000616939 KBTBD11O94819 623 aa13.34□□□□□ -0.27
GPN1-212ENST00000616939 CNOT4O95628 575 aaKnown RBP13.34□□□□□ -0.27
GPN1-212ENST00000616939 CCKARP32238 428 aa13.34□□□□□ -0.27
GPN1-212ENST00000616939 FAM3BP58499 235 aaPredicted RBP13.34□□□□□ -0.27
GPN1-212ENST00000616939 RSPO4Q2I0M5 234 aaPredicted RBP13.34□□□□□ -0.27
GPN1-212ENST00000616939 FBXO46Q6PJ61 603 aaPredicted RBP13.34□□□□□ -0.27
GPN1-212ENST00000616939 Q6ZS52 159 aa13.34□□□□□ -0.27
GPN1-212ENST00000616939 C16orf82Q7Z2V1 217 aa13.34□□□□□ -0.27
GPN1-212ENST00000616939 GPR146Q96CH1 333 aa13.34□□□□□ -0.27
GPN1-212ENST00000616939 DEFB126Q9BYW3 111 aa13.34□□□□□ -0.27
GPN1-212ENST00000616939 MRPL37Q9BZE1 423 aaKnown RBP13.34□□□□□ -0.27
GPN1-212ENST00000616939 RIMS4Q9H426 269 aaPredicted RBP13.34□□□□□ -0.27
GPN1-212ENST00000616939 CHD9Q3L8U1 2897 aa13.34□□□□□ -0.27
GPN1-212ENST00000616939 ATXN7O15265 892 aaPredicted RBP13.34□□□□□ -0.27
GPN1-212ENST00000616939 TCAPO15273 167 aa13.34□□□□□ -0.27
GPN1-212ENST00000616939 PGLYRP1O75594 196 aaPredicted RBP13.34□□□□□ -0.27
GPN1-212ENST00000616939 TYMSP04818 313 aa13.34□□□□□ -0.27
GPN1-212ENST00000616939 F2RP25116 425 aa13.34□□□□□ -0.27
GPN1-212ENST00000616939 DSCR4P56555 118 aaPredicted RBP13.34□□□□□ -0.27
GPN1-212ENST00000616939 CLN3Q13286 438 aa13.34□□□□□ -0.27
GPN1-212ENST00000616939 SLC10A1Q14973 349 aa13.34□□□□□ -0.27
GPN1-212ENST00000616939 HERPUD1Q15011 391 aa13.34□□□□□ -0.27
GPN1-212ENST00000616939 TMEM241Q24JQ0 296 aa13.34□□□□□ -0.27
GPN1-212ENST00000616939 ZNF611Q8N823 705 aa13.34□□□□□ -0.27
GPN1-212ENST00000616939 RLN3Q8WXF3 142 aa13.34□□□□□ -0.27
GPN1-212ENST00000616939 NAT6Q93015 286 aa13.34□□□□□ -0.27
GPN1-212ENST00000616939 STRADBQ9C0K7 418 aa13.34□□□□□ -0.27
GPN1-212ENST00000616939 CCL28Q9NRJ3 127 aa13.34□□□□□ -0.27
GPN1-212ENST00000616939 ATP23Q9Y6H3 246 aa13.34□□□□□ -0.27
GPN1-212ENST00000616939 TNRC6AQ8NDV7 1962 aaKnown RBP13.33□□□□□ -0.28
GPN1-212ENST00000616939 UNC13CQ8NB66 2214 aa13.33□□□□□ -0.28
GPN1-212ENST00000616939 A0A0C4DFX4 3053 aa13.33□□□□□ -0.28
GPN1-212ENST00000616939 MAP1LC3B2A6NCE7 125 aa13.33□□□□□ -0.28
GPN1-212ENST00000616939 CCDC85CA6NKD9 419 aa13.33□□□□□ -0.28
GPN1-212ENST00000616939 CEBPZOSA8MTT3 80 aa13.33□□□□□ -0.28
GPN1-212ENST00000616939 PPP5D1E7EU14 171 aa13.33□□□□□ -0.28
GPN1-212ENST00000616939 ZNF32P17041 273 aa13.33□□□□□ -0.28
GPN1-212ENST00000616939 FGF12P61328 243 aa13.33□□□□□ -0.28
GPN1-212ENST00000616939 PCBD1P61457 104 aa13.33□□□□□ -0.28
GPN1-212ENST00000616939 HBG1P69891 147 aa13.33□□□□□ -0.28
GPN1-212ENST00000616939 HBG2P69892 147 aa13.33□□□□□ -0.28
GPN1-212ENST00000616939 PRDX4Q13162 271 aa13.33□□□□□ -0.28
GPN1-212ENST00000616939 ACOT6Q3I5F7 207 aaPredicted RBP13.33□□□□□ -0.28
GPN1-212ENST00000616939 CDCP2Q5VXM1 449 aa13.33□□□□□ -0.28
GPN1-212ENST00000616939 ZNF880Q6PDB4 577 aa13.33□□□□□ -0.28
GPN1-212ENST00000616939 LCN15Q6UWW0 184 aa13.33□□□□□ -0.28
GPN1-212ENST00000616939 TSTD1Q8NFU3 115 aa13.33□□□□□ -0.28
GPN1-212ENST00000616939 OR51G1Q8NGK1 321 aa13.33□□□□□ -0.28
GPN1-212ENST00000616939 ANAPC16Q96DE5 110 aa13.33□□□□□ -0.28
GPN1-212ENST00000616939 ADGRG7Q96K78 797 aa13.33□□□□□ -0.28
GPN1-212ENST00000616939 HIST1H2AAQ96QV6 131 aa13.33□□□□□ -0.28
GPN1-212ENST00000616939 UCN2Q96RP3 112 aa13.33□□□□□ -0.28
GPN1-212ENST00000616939 TMEM106CQ9BVX2 250 aa13.33□□□□□ -0.28
GPN1-212ENST00000616939 REPIN1Q9BWE0 567 aaKnown RBP13.33□□□□□ -0.28
GPN1-212ENST00000616939 MAP1LC3BQ9GZQ8 125 aa13.33□□□□□ -0.28
GPN1-212ENST00000616939 PRSS50Q9UI38 385 aa13.33□□□□□ -0.28
GPN1-212ENST00000616939 XKRY2A2RUG3 117 aa13.32□□□□□ -0.28
GPN1-212ENST00000616939 GGCTO75223 188 aaKnown RBP13.32□□□□□ -0.28
GPN1-212ENST00000616939 IL18BPO95998 194 aa13.32□□□□□ -0.28
GPN1-212ENST00000616939 HRASP01112 189 aa13.32□□□□□ -0.28
GPN1-212ENST00000616939 METTL15P1P0C7V9 234 aa13.32□□□□□ -0.28
GPN1-212ENST00000616939 LIFP15018 202 aa13.32□□□□□ -0.28
GPN1-212ENST00000616939 TMEM267Q0VDI3 215 aaPredicted RBP13.32□□□□□ -0.28
GPN1-212ENST00000616939 BSXQ3C1V8 233 aa13.32□□□□□ -0.28
GPN1-212ENST00000616939 ACTL10Q5JWF8 245 aa13.32□□□□□ -0.28
GPN1-212ENST00000616939 C5orf24Q7Z6I8 188 aa13.32□□□□□ -0.28
GPN1-212ENST00000616939 MRPL52Q86TS9 123 aaKnown RBP13.32□□□□□ -0.28
GPN1-212ENST00000616939 CADM4Q8NFZ8 388 aa13.32□□□□□ -0.28
GPN1-212ENST00000616939 TMEM18Q96B42 140 aa13.32□□□□□ -0.28
GPN1-212ENST00000616939 ZNF837Q96EG3 531 aaPredicted RBP13.32□□□□□ -0.28
GPN1-212ENST00000616939 OR5B12Q96R08 314 aa13.32□□□□□ -0.28
GPN1-212ENST00000616939 SMIM7Q9BQ49 75 aa13.32□□□□□ -0.28
GPN1-212ENST00000616939 RSG1Q9BU20 258 aa13.32□□□□□ -0.28
GPN1-212ENST00000616939 WNT5BQ9H1J7 359 aa13.32□□□□□ -0.28
GPN1-212ENST00000616939 PPP1R14DQ9NXH3 145 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms