RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 MIDNQ504T8 468 aa12.21□□□□□ -0.45
UBXN1-218ENST00000616865 TMEM69Q5SWH9 247 aa12.21□□□□□ -0.45
UBXN1-218ENST00000616865 SIGIRRQ6IA17 410 aa12.21□□□□□ -0.45
UBXN1-218ENST00000616865 BTNL3Q6UXE8 466 aa12.21□□□□□ -0.45
UBXN1-218ENST00000616865 ZNF841Q6ZN19 808 aa12.21□□□□□ -0.45
UBXN1-218ENST00000616865 BTN2A1Q7KYR7 527 aa12.21□□□□□ -0.45
UBXN1-218ENST00000616865 FAM185AQ8N0U4 392 aa12.21□□□□□ -0.45
UBXN1-218ENST00000616865 FGFRL1Q8N441 504 aa12.21□□□□□ -0.45
UBXN1-218ENST00000616865 OR4M1Q8NGD0 313 aa12.21□□□□□ -0.45
UBXN1-218ENST00000616865 UPRTQ96BW1 309 aa12.21□□□□□ -0.45
UBXN1-218ENST00000616865 HSF4Q9ULV5 492 aa12.21□□□□□ -0.45
UBXN1-218ENST00000616865 SOX21Q9Y651 276 aaPredicted RBP12.21□□□□□ -0.45
UBXN1-218ENST00000616865 A3GALT2U3KPV4 340 aa12.21□□□□□ -0.45
UBXN1-218ENST00000616865 PRKDCP78527 4128 aaKnown RBP12.2□□□□□ -0.46
UBXN1-218ENST00000616865 TRBV23-1A0A0A0MS06 115 aa12.2□□□□□ -0.46
UBXN1-218ENST00000616865 IGHV2-70DA0A0C4DH43 119 aa12.2□□□□□ -0.46
UBXN1-218ENST00000616865 A0A1W2PPH5 198 aa12.2□□□□□ -0.46
UBXN1-218ENST00000616865 TMEM30CPA0ZSE6 113 aa12.2□□□□□ -0.46
UBXN1-218ENST00000616865 CSN2P05814 226 aa12.2□□□□□ -0.46
UBXN1-218ENST00000616865 HIST1H1DP16402 221 aaKnown RBP12.2□□□□□ -0.46
UBXN1-218ENST00000616865 GNB3P16520 340 aa12.2□□□□□ -0.46
UBXN1-218ENST00000616865 P2RX3P56373 397 aa12.2□□□□□ -0.46
UBXN1-218ENST00000616865 RPL31P62899 125 aaKnown RBP12.2□□□□□ -0.46
UBXN1-218ENST00000616865 TRAPPC6BQ86SZ2 158 aa12.2□□□□□ -0.46
UBXN1-218ENST00000616865 LAX1Q8IWV1 398 aa12.2□□□□□ -0.46
UBXN1-218ENST00000616865 IZUMO1Q8IYV9 350 aa12.2□□□□□ -0.46
UBXN1-218ENST00000616865 DTX3Q8N9I9 347 aa12.2□□□□□ -0.46
UBXN1-218ENST00000616865 DACT3Q96B18 629 aaPredicted RBP12.2□□□□□ -0.46
UBXN1-218ENST00000616865 SULT4A1Q9BR01 284 aa12.2□□□□□ -0.46
UBXN1-218ENST00000616865 NXF2Q9GZY0 626 aaKnown RBP12.2□□□□□ -0.46
UBXN1-218ENST00000616865 EXTL2Q9UBQ6 330 aa12.2□□□□□ -0.46
UBXN1-218ENST00000616865 MRPS7Q9Y2R9 242 aaKnown RBP12.2□□□□□ -0.46
UBXN1-218ENST00000616865 MMP24Q9Y5R2 645 aa12.2□□□□□ -0.46
UBXN1-218ENST00000616865 TGP01266 2768 aa12.2□□□□□ -0.46
UBXN1-218ENST00000616865 MEIKINA0A087WXM9 373 aa12.19□□□□□ -0.46
UBXN1-218ENST00000616865 MDFIC2A0A1B0GVS7 189 aa12.19□□□□□ -0.46
UBXN1-218ENST00000616865 hADV38S2A0JD32 116 aa12.19□□□□□ -0.46
UBXN1-218ENST00000616865 RAB27BO00194 218 aa12.19□□□□□ -0.46
UBXN1-218ENST00000616865 XRCC3O43542 346 aa12.19□□□□□ -0.46
UBXN1-218ENST00000616865 ENSAO43768 121 aaKnown RBP12.19□□□□□ -0.46
UBXN1-218ENST00000616865 CA11O75493 328 aa12.19□□□□□ -0.46
UBXN1-218ENST00000616865 GSTP1P09211 210 aaKnown RBP12.19□□□□□ -0.46
UBXN1-218ENST00000616865 ERP29P30040 261 aaKnown RBP12.19□□□□□ -0.46
UBXN1-218ENST00000616865 GLIPR1P48060 266 aa12.19□□□□□ -0.46
UBXN1-218ENST00000616865 TMEM50BP56557 158 aa12.19□□□□□ -0.46
UBXN1-218ENST00000616865 GNG2P59768 71 aa12.19□□□□□ -0.46
UBXN1-218ENST00000616865 C11orf91Q3C1V1 193 aa12.19□□□□□ -0.46
UBXN1-218ENST00000616865 PLAC9Q5JTB6 97 aa12.19□□□□□ -0.46
UBXN1-218ENST00000616865 SLC35E4Q6ICL7 350 aa12.19□□□□□ -0.46
UBXN1-218ENST00000616865 C16orf87Q6PH81 154 aa12.19□□□□□ -0.46
UBXN1-218ENST00000616865 PLPPR1Q8TBJ4 325 aa12.19□□□□□ -0.46
UBXN1-218ENST00000616865 SETD6Q8TBK2 473 aa12.19□□□□□ -0.46
UBXN1-218ENST00000616865 DYRK2Q92630 601 aa12.19□□□□□ -0.46
UBXN1-218ENST00000616865 DIRAS2Q96HU8 199 aa12.19□□□□□ -0.46
UBXN1-218ENST00000616865 CMSS1Q9BQ75 279 aaKnown RBP12.19□□□□□ -0.46
UBXN1-218ENST00000616865 NUDT16L1Q9BRJ7 211 aaKnown RBP12.19□□□□□ -0.46
UBXN1-218ENST00000616865 DCTN5Q9BTE1 182 aa12.19□□□□□ -0.46
UBXN1-218ENST00000616865 AK3Q9UIJ7 227 aa12.19□□□□□ -0.46
UBXN1-218ENST00000616865 KIF25Q9UIL4 384 aa12.19□□□□□ -0.46
UBXN1-218ENST00000616865 RPUSD1Q9UJJ7 312 aaKnown RBP12.19□□□□□ -0.46
UBXN1-218ENST00000616865 TRAPPC2LQ9UL33 140 aa12.19□□□□□ -0.46
UBXN1-218ENST00000616865 TRGV10A0A0A0MS01 117 aa12.18□□□□□ -0.46
UBXN1-218ENST00000616865 ODAMA1E959 279 aa12.18□□□□□ -0.46
UBXN1-218ENST00000616865 FOXI3A8MTJ6 420 aaPredicted RBP12.18□□□□□ -0.46
UBXN1-218ENST00000616865 SERPINE3A8MV23 424 aa12.18□□□□□ -0.46
UBXN1-218ENST00000616865 HOXA3O43365 443 aaPredicted RBP12.18□□□□□ -0.46
UBXN1-218ENST00000616865 CLPXO76031 633 aa12.18□□□□□ -0.46
UBXN1-218ENST00000616865 OMGP23515 440 aa12.18□□□□□ -0.46
UBXN1-218ENST00000616865 GLP1RP43220 463 aa12.18□□□□□ -0.46
UBXN1-218ENST00000616865 TAS2R20P59543 309 aa12.18□□□□□ -0.46
UBXN1-218ENST00000616865 MEF2CQ06413 473 aaPredicted RBP12.18□□□□□ -0.46
UBXN1-218ENST00000616865 MADCAM1Q13477 382 aa12.18□□□□□ -0.46
UBXN1-218ENST00000616865 CNIH2Q6PI25 160 aa12.18□□□□□ -0.46
UBXN1-218ENST00000616865 BAIAP2L2Q6UXY1 529 aa12.18□□□□□ -0.46
UBXN1-218ENST00000616865 ZNF497Q6ZNH5 498 aa12.18□□□□□ -0.46
UBXN1-218ENST00000616865 TPRX1Q8N7U7 411 aa12.18□□□□□ -0.46
UBXN1-218ENST00000616865 CCDC107Q8WV48 283 aa12.18□□□□□ -0.46
UBXN1-218ENST00000616865 WFDC12Q8WWY7 111 aa12.18□□□□□ -0.46
UBXN1-218ENST00000616865 MIXL1Q9H2W2 232 aa12.18□□□□□ -0.46
UBXN1-218ENST00000616865 RIMS4Q9H426 269 aaPredicted RBP12.18□□□□□ -0.46
UBXN1-218ENST00000616865 PTTG2Q9NZH5 202 aa12.18□□□□□ -0.46
UBXN1-218ENST00000616865 OR6C3Q9NZP0 311 aa12.18□□□□□ -0.46
UBXN1-218ENST00000616865 ONECUT1Q9UBC0 465 aa12.18□□□□□ -0.46
UBXN1-218ENST00000616865 MFNGO00587 321 aa12.17□□□□□ -0.46
UBXN1-218ENST00000616865 LIPFP07098 398 aa12.17□□□□□ -0.46
UBXN1-218ENST00000616865 PITPNAQ00169 270 aa12.17□□□□□ -0.46
UBXN1-218ENST00000616865 PNLIPRP3Q17RR3 467 aa12.17□□□□□ -0.46
UBXN1-218ENST00000616865 RSBN1Q5VWQ0 802 aaPredicted RBP12.17□□□□□ -0.46
UBXN1-218ENST00000616865 OLFML2AQ68BL7 652 aa12.17□□□□□ -0.46
UBXN1-218ENST00000616865 RTN4RL2Q86UN3 420 aa12.17□□□□□ -0.46
UBXN1-218ENST00000616865 ZNF565Q8N9K5 539 aa12.17□□□□□ -0.46
UBXN1-218ENST00000616865 OR4K15Q8NH41 348 aa12.17□□□□□ -0.46
UBXN1-218ENST00000616865 C15orf40Q8WUR7 153 aa12.17□□□□□ -0.46
UBXN1-218ENST00000616865 COQ2Q96H96 371 aa12.17□□□□□ -0.46
UBXN1-218ENST00000616865 PRDM13Q9H4Q3 707 aa12.17□□□□□ -0.46
UBXN1-218ENST00000616865 C12orf4Q9NQ89 552 aa12.17□□□□□ -0.46
UBXN1-218ENST00000616865 C19orf12Q9NSK7 152 aa12.17□□□□□ -0.46
UBXN1-218ENST00000616865 KCNIP1Q9NZI2 227 aa12.17□□□□□ -0.46
UBXN1-218ENST00000616865 A0A1B0GUS0 222 aa12.16□□□□□ -0.46
UBXN1-218ENST00000616865 hCG_1809904A0A1W2PP81 198 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms