RNA–Protein interactions for RNA: ENST00000608720.5

CTCFL-219, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 2,241 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-219ENST00000608720 KIR3DP1A8MWS1 328 aa12.6□□□□□ -0.39
CTCFL-219ENST00000608720 COX5BP10606 129 aa12.6□□□□□ -0.39
CTCFL-219ENST00000608720 MMP9P14780 707 aa12.6□□□□□ -0.39
CTCFL-219ENST00000608720 NRN1LQ496H8 165 aa12.6□□□□□ -0.39
CTCFL-219ENST00000608720 SAXO1Q8IYX7 474 aa12.6□□□□□ -0.39
CTCFL-219ENST00000608720 TMEM252Q8N6L7 170 aa12.6□□□□□ -0.39
CTCFL-219ENST00000608720 RCC1LQ96I51 464 aaKnown RBP12.6□□□□□ -0.39
CTCFL-219ENST00000608720 PILRBQ9UKJ0 227 aa12.6□□□□□ -0.39
CTCFL-219ENST00000608720 SPEGQ15772 3267 aa12.59□□□□□ -0.39
CTCFL-219ENST00000608720 MED19A0JLT2 244 aaPredicted RBP12.59□□□□□ -0.39
CTCFL-219ENST00000608720 CLEC18AA5D8T8 446 aa12.59□□□□□ -0.39
CTCFL-219ENST00000608720 IGHEP01854 428 aa12.59□□□□□ -0.39
CTCFL-219ENST00000608720 JOSD1Q15040 202 aaPredicted RBP12.59□□□□□ -0.39
CTCFL-219ENST00000608720 COLCA1Q6ZS62 124 aa12.59□□□□□ -0.39
CTCFL-219ENST00000608720 ARL6IP6Q8N6S5 226 aa12.59□□□□□ -0.39
CTCFL-219ENST00000608720 CLEC18CQ8NCF0 446 aa12.59□□□□□ -0.39
CTCFL-219ENST00000608720 GNPNAT1Q96EK6 184 aaPredicted RBP12.59□□□□□ -0.39
CTCFL-219ENST00000608720 RARRES2Q99969 163 aa12.59□□□□□ -0.39
CTCFL-219ENST00000608720 MRPS18CQ9Y3D5 142 aaKnown RBP12.59□□□□□ -0.39
CTCFL-219ENST00000608720 CBY1Q9Y3M2 126 aa12.59□□□□□ -0.39
CTCFL-219ENST00000608720 A0A1B0GV50 99 aa12.58□□□□□ -0.39
CTCFL-219ENST00000608720 NTN3O00634 580 aaPredicted RBP12.58□□□□□ -0.39
CTCFL-219ENST00000608720 ADAM20O43506 726 aa12.58□□□□□ -0.39
CTCFL-219ENST00000608720 SSSCA1O60232 199 aa12.58□□□□□ -0.39
CTCFL-219ENST00000608720 CYTIPO60759 359 aa12.58□□□□□ -0.39
CTCFL-219ENST00000608720 TRAPPC6AO75865 159 aa12.58□□□□□ -0.39
CTCFL-219ENST00000608720 CTXN2P0C2S0 81 aa12.58□□□□□ -0.39
CTCFL-219ENST00000608720 RFPL3SP0C7P2 107 aa12.58□□□□□ -0.39
CTCFL-219ENST00000608720 IL2RGP31785 369 aa12.58□□□□□ -0.39
CTCFL-219ENST00000608720 ZFP36L1Q07352 338 aaKnown RBP12.58□□□□□ -0.39
CTCFL-219ENST00000608720 BAXQ07812 192 aa12.58□□□□□ -0.39
CTCFL-219ENST00000608720 SUMF1Q8NBK3 374 aa12.58□□□□□ -0.39
CTCFL-219ENST00000608720 ACTR3CQ9C0K3 210 aaPredicted RBP12.58□□□□□ -0.39
CTCFL-219ENST00000608720 MMP24Q9Y5R2 645 aa12.58□□□□□ -0.39
CTCFL-219ENST00000608720 PUS1Q9Y606 427 aaKnown RBP eCLIP12.58□□□□□ -0.39
CTCFL-219ENST00000608720 SMCO3A2RU48 225 aa12.58□□□□□ -0.4
CTCFL-219ENST00000608720 ZNF732B4DXR9 585 aa12.58□□□□□ -0.4
CTCFL-219ENST00000608720 PROB1E7EW31 1015 aa12.58□□□□□ -0.4
CTCFL-219ENST00000608720 NAPSAO96009 420 aa12.58□□□□□ -0.4
CTCFL-219ENST00000608720 CXCL1P09341 107 aa12.58□□□□□ -0.4
CTCFL-219ENST00000608720 FGF12P61328 243 aa12.58□□□□□ -0.4
CTCFL-219ENST00000608720 ID3Q02535 119 aa12.58□□□□□ -0.4
CTCFL-219ENST00000608720 CXorf66Q5JRM2 361 aaPredicted RBP12.58□□□□□ -0.4
CTCFL-219ENST00000608720 WIPI1Q5MNZ9 446 aaPredicted RBP12.58□□□□□ -0.4
CTCFL-219ENST00000608720 SPSB3Q6PJ21 355 aa12.58□□□□□ -0.4
CTCFL-219ENST00000608720 GAPTQ8N292 157 aa12.58□□□□□ -0.4
CTCFL-219ENST00000608720 ZFP62Q8NB50 900 aaPredicted RBP12.58□□□□□ -0.4
CTCFL-219ENST00000608720 CPEB3Q8NE35 698 aaKnown RBP12.58□□□□□ -0.4
CTCFL-219ENST00000608720 TMEM45BQ96B21 275 aa12.58□□□□□ -0.4
CTCFL-219ENST00000608720 PACRGQ96M98 296 aaPredicted RBP12.58□□□□□ -0.4
CTCFL-219ENST00000608720 PRO1933Q9H354 126 aa12.58□□□□□ -0.4
CTCFL-219ENST00000608720 EML6Q6ZMW3 1958 aa12.58□□□□□ -0.4
CTCFL-219ENST00000608720 KIR2DS1A0A191URI9 304 aa12.57□□□□□ -0.4
CTCFL-219ENST00000608720 LRRC3CA6NJW4 275 aa12.57□□□□□ -0.4
CTCFL-219ENST00000608720 B4DEV8 164 aa12.57□□□□□ -0.4
CTCFL-219ENST00000608720 H3BQ15 152 aa12.57□□□□□ -0.4
CTCFL-219ENST00000608720 CRYABP02511 175 aaKnown RBP12.57□□□□□ -0.4
CTCFL-219ENST00000608720 BCL3P20749 454 aa12.57□□□□□ -0.4
CTCFL-219ENST00000608720 VDAC1P21796 283 aa12.57□□□□□ -0.4
CTCFL-219ENST00000608720 OMGP23515 440 aa12.57□□□□□ -0.4
CTCFL-219ENST00000608720 UCP1P25874 307 aa12.57□□□□□ -0.4
CTCFL-219ENST00000608720 KIR2DS4P43632 304 aa12.57□□□□□ -0.4
CTCFL-219ENST00000608720 CCL20P78556 96 aa12.57□□□□□ -0.4
CTCFL-219ENST00000608720 KIR2DS1Q14954 304 aa12.57□□□□□ -0.4
CTCFL-219ENST00000608720 OR8G1Q15617 311 aa12.57□□□□□ -0.4
CTCFL-219ENST00000608720 PMS2CLQ68D20 193 aa12.57□□□□□ -0.4
CTCFL-219ENST00000608720 ZNF818PQ6ZRF7 136 aa12.57□□□□□ -0.4
CTCFL-219ENST00000608720 IL22RA2Q969J5 263 aa12.57□□□□□ -0.4
CTCFL-219ENST00000608720 RAB39BQ96DA2 213 aa12.57□□□□□ -0.4
CTCFL-219ENST00000608720 REPIN1Q9BWE0 567 aaKnown RBP12.57□□□□□ -0.4
CTCFL-219ENST00000608720 KIAA1456Q9P272 454 aa12.57□□□□□ -0.4
CTCFL-219ENST00000608720 SIT1Q9Y3P8 196 aa12.57□□□□□ -0.4
CTCFL-219ENST00000608720 TUSC2O75896 110 aa12.57□□□□□ -0.4
CTCFL-219ENST00000608720 SCTP09683 121 aa12.57□□□□□ -0.4
CTCFL-219ENST00000608720 FABP4P15090 132 aa12.57□□□□□ -0.4
CTCFL-219ENST00000608720 TAGLN2P37802 199 aaKnown RBP12.57□□□□□ -0.4
CTCFL-219ENST00000608720 GLIPR1P48060 266 aa12.57□□□□□ -0.4
CTCFL-219ENST00000608720 DUSP3P51452 185 aaPredicted RBP12.57□□□□□ -0.4
CTCFL-219ENST00000608720 CACNA1EQ15878 2313 aa12.57□□□□□ -0.4
CTCFL-219ENST00000608720 NMSQ5H8A3 153 aa12.57□□□□□ -0.4
CTCFL-219ENST00000608720 AKR1C8PQ5T2L2 129 aa12.57□□□□□ -0.4
CTCFL-219ENST00000608720 OR2T2Q6IF00 324 aa12.57□□□□□ -0.4
CTCFL-219ENST00000608720 BATF2Q8N1L9 274 aa12.57□□□□□ -0.4
CTCFL-219ENST00000608720 IL22RA1Q8N6P7 574 aa12.57□□□□□ -0.4
CTCFL-219ENST00000608720 OR5C1Q8NGR4 320 aa12.57□□□□□ -0.4
CTCFL-219ENST00000608720 TMEM171Q8WVE6 324 aa12.57□□□□□ -0.4
CTCFL-219ENST00000608720 MAGT1Q9H0U3 335 aa12.57□□□□□ -0.4
CTCFL-219ENST00000608720 SMOC1Q9H4F8 434 aa12.57□□□□□ -0.4
CTCFL-219ENST00000608720 SLC22A20A6NK97 555 aa12.56□□□□□ -0.4
CTCFL-219ENST00000608720 DYNLT3P51808 116 aa12.56□□□□□ -0.4
CTCFL-219ENST00000608720 PRDX4Q13162 271 aa12.56□□□□□ -0.4
CTCFL-219ENST00000608720 MPV17LQ2QL34 196 aa12.56□□□□□ -0.4
CTCFL-219ENST00000608720 CMTM1Q8IZ96 169 aa12.56□□□□□ -0.4
CTCFL-219ENST00000608720 OR56B2PQ8NGI1 322 aa12.56□□□□□ -0.4
CTCFL-219ENST00000608720 ABHD3Q8WU67 409 aa12.56□□□□□ -0.4
CTCFL-219ENST00000608720 SIGLEC12Q96PQ1 595 aa12.56□□□□□ -0.4
CTCFL-219ENST00000608720 HIST1H2BLQ99880 126 aa12.56□□□□□ -0.4
CTCFL-219ENST00000608720 ABHD14AQ9BUJ0 271 aa12.56□□□□□ -0.4
CTCFL-219ENST00000608720 TMEM242Q9NWH2 141 aa12.56□□□□□ -0.4
CTCFL-219ENST00000608720 PITPNC1Q9UKF7 332 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms