RNA–Protein interactions for RNA: ENST00000603885.5

CCDC12-208, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-208ENST00000603885 AWAT2Q6E213 333 aa14.47□□□□□ -0.09
CCDC12-208ENST00000603885 NDUFA11Q86Y39 141 aa14.47□□□□□ -0.09
CCDC12-208ENST00000603885 CITED2Q99967 270 aaPredicted RBP14.47□□□□□ -0.09
CCDC12-208ENST00000603885 M0QZK8 103 aa14.46□□□□□ -0.09
CCDC12-208ENST00000603885 ABCA11PQ4W5N1 156 aa14.46□□□□□ -0.09
CCDC12-208ENST00000603885 FBLN7Q53RD9 439 aa14.46□□□□□ -0.09
CCDC12-208ENST00000603885 C1QL4Q86Z23 238 aa14.46□□□□□ -0.09
CCDC12-208ENST00000603885 NKAIN3Q8N8D7 197 aa14.46□□□□□ -0.09
CCDC12-208ENST00000603885 OR10X1Q8NGY0 326 aa14.46□□□□□ -0.09
CCDC12-208ENST00000603885 ARL11Q969Q4 196 aa14.46□□□□□ -0.09
CCDC12-208ENST00000603885 MND1Q9BWT6 205 aa14.46□□□□□ -0.09
CCDC12-208ENST00000603885 RCC2Q9P258 522 aaKnown RBP14.46□□□□□ -0.09
CCDC12-208ENST00000603885 PRKDCP78527 4128 aaKnown RBP14.46□□□□□ -0.09
CCDC12-208ENST00000603885 TGP01266 2768 aa14.46□□□□□ -0.09
CCDC12-208ENST00000603885 MCRIP1C9JLW8 97 aa14.45□□□□□ -0.1
CCDC12-208ENST00000603885 AIPO00170 330 aa14.45□□□□□ -0.1
CCDC12-208ENST00000603885 PIN1P1O15428 100 aa14.45□□□□□ -0.1
CCDC12-208ENST00000603885 ORC5O43913 435 aa14.45□□□□□ -0.1
CCDC12-208ENST00000603885 CDK1P06493 297 aa14.45□□□□□ -0.1
CCDC12-208ENST00000603885 LPLP06858 475 aa14.45□□□□□ -0.1
CCDC12-208ENST00000603885 RAB7AP51149 207 aa14.45□□□□□ -0.1
CCDC12-208ENST00000603885 RNLSQ5VYX0 342 aa14.45□□□□□ -0.1
CCDC12-208ENST00000603885 ZNF497Q6ZNH5 498 aa14.45□□□□□ -0.1
CCDC12-208ENST00000603885 THNSL2Q86YJ6 484 aa14.45□□□□□ -0.1
CCDC12-208ENST00000603885 OR8H3Q8N146 312 aa14.45□□□□□ -0.1
CCDC12-208ENST00000603885 OR4F17Q8NGA8 305 aa14.45□□□□□ -0.1
CCDC12-208ENST00000603885 OR5AU1Q8NGC0 362 aa14.45□□□□□ -0.1
CCDC12-208ENST00000603885 OR52M1Q8NGK5 317 aa14.45□□□□□ -0.1
CCDC12-208ENST00000603885 OR56B4Q8NH76 319 aa14.45□□□□□ -0.1
CCDC12-208ENST00000603885 CCDC107Q8WV48 283 aa14.45□□□□□ -0.1
CCDC12-208ENST00000603885 OR4F4Q96R69 305 aa14.45□□□□□ -0.1
CCDC12-208ENST00000603885 A0A1W2PPI3 338 aa14.44□□□□□ -0.1
CCDC12-208ENST00000603885 FAM90A18PA6NE21 464 aa14.44□□□□□ -0.1
CCDC12-208ENST00000603885 FAM90A16PA6NEW6 464 aa14.44□□□□□ -0.1
CCDC12-208ENST00000603885 FAM90A20PA6NIJ5 464 aa14.44□□□□□ -0.1
CCDC12-208ENST00000603885 FAM90A9PA6NNJ1 464 aa14.44□□□□□ -0.1
CCDC12-208ENST00000603885 FAM90A12PA8MX19 464 aa14.44□□□□□ -0.1
CCDC12-208ENST00000603885 FAM90A5PA8MXJ8 464 aa14.44□□□□□ -0.1
CCDC12-208ENST00000603885 PTGES3LE9PB15 166 aa14.44□□□□□ -0.1
CCDC12-208ENST00000603885 C15orf65H3BRN8 121 aa14.44□□□□□ -0.1
CCDC12-208ENST00000603885 SDCBPO00560 298 aaPredicted RBP14.44□□□□□ -0.1
CCDC12-208ENST00000603885 MT-ND4P03905 459 aa14.44□□□□□ -0.1
CCDC12-208ENST00000603885 SNRNP70P08621 437 aaKnown RBP14.44□□□□□ -0.1
CCDC12-208ENST00000603885 FAM90A15PP0C7V4 464 aa14.44□□□□□ -0.1
CCDC12-208ENST00000603885 FAM90A13PP0C7W8 464 aa14.44□□□□□ -0.1
CCDC12-208ENST00000603885 FAM90A14PP0C7W9 464 aa14.44□□□□□ -0.1
CCDC12-208ENST00000603885 FAM90A24PP0C7X0 464 aa14.44□□□□□ -0.1
CCDC12-208ENST00000603885 MGMTP16455 207 aa14.44□□□□□ -0.1
CCDC12-208ENST00000603885 RAB12Q6IQ22 244 aa14.44□□□□□ -0.1
CCDC12-208ENST00000603885 CENPVQ7Z7K6 275 aaPredicted RBP14.44□□□□□ -0.1
CCDC12-208ENST00000603885 MS4A15Q8N5U1 240 aa14.44□□□□□ -0.1
CCDC12-208ENST00000603885 DRAM1Q8N682 238 aa14.44□□□□□ -0.1
CCDC12-208ENST00000603885 MYDGFQ969H8 173 aa14.44□□□□□ -0.1
CCDC12-208ENST00000603885 R3HDM4Q96D70 268 aa14.44□□□□□ -0.1
CCDC12-208ENST00000603885 UQCC2Q9BRT2 126 aa14.44□□□□□ -0.1
CCDC12-208ENST00000603885 SELENOIQ9C0D9 397 aa14.44□□□□□ -0.1
CCDC12-208ENST00000603885 RAB9BQ9NP90 201 aa14.44□□□□□ -0.1
CCDC12-208ENST00000603885 SCN3BQ9NY72 215 aa14.44□□□□□ -0.1
CCDC12-208ENST00000603885 NKX1-2Q9UD57 310 aaPredicted RBP14.44□□□□□ -0.1
CCDC12-208ENST00000603885 MOB4Q9Y3A3 225 aa14.44□□□□□ -0.1
CCDC12-208ENST00000603885 A0A1W2PPE3 182 aa14.43□□□□□ -0.1
CCDC12-208ENST00000603885 FAM90A10PA6NDY2 464 aa14.43□□□□□ -0.1
CCDC12-208ENST00000603885 FAM90A7PA6NKC0 464 aa14.43□□□□□ -0.1
CCDC12-208ENST00000603885 ADARB2-AS1A8MUL3 147 aa14.43□□□□□ -0.1
CCDC12-208ENST00000603885 FAM90A23PA8MXZ1 464 aa14.43□□□□□ -0.1
CCDC12-208ENST00000603885 CRTAPO75718 401 aaPredicted RBP14.43□□□□□ -0.1
CCDC12-208ENST00000603885 AMY1AP04745 511 aa14.43□□□□□ -0.1
CCDC12-208ENST00000603885 AMY2AP04746 511 aa14.43□□□□□ -0.1
CCDC12-208ENST00000603885 GABPB1Q06547 395 aaPredicted RBP14.43□□□□□ -0.1
CCDC12-208ENST00000603885 DIAPH2-AS1Q14236 149 aa14.43□□□□□ -0.1
CCDC12-208ENST00000603885 HES1Q14469 280 aa14.43□□□□□ -0.1
CCDC12-208ENST00000603885 C9orf152Q5JTZ5 239 aa14.43□□□□□ -0.1
CCDC12-208ENST00000603885 C6orf141Q5SZD1 244 aa14.43□□□□□ -0.1
CCDC12-208ENST00000603885 LYPD6Q86Y78 171 aa14.43□□□□□ -0.1
CCDC12-208ENST00000603885 UBALD1Q8TB05 177 aa14.43□□□□□ -0.1
CCDC12-208ENST00000603885 BANF2Q9H503 90 aa14.43□□□□□ -0.1
CCDC12-208ENST00000603885 GFOD1Q9NXC2 390 aa14.43□□□□□ -0.1
CCDC12-208ENST00000603885 ETAA1Q9NY74 926 aa14.43□□□□□ -0.1
CCDC12-208ENST00000603885 TRAPPC2LQ9UL33 140 aa14.43□□□□□ -0.1
CCDC12-208ENST00000603885 PEX16Q9Y5Y5 336 aa14.43□□□□□ -0.1
CCDC12-208ENST00000603885 PLXNB1O43157 2135 aa14.42□□□□□ -0.1
CCDC12-208ENST00000603885 SH2D7A6NKC9 451 aaPredicted RBP14.42□□□□□ -0.1
CCDC12-208ENST00000603885 G3V4G9 280 aa14.42□□□□□ -0.1
CCDC12-208ENST00000603885 HSD17B6O14756 317 aa14.42□□□□□ -0.1
CCDC12-208ENST00000603885 TMEM11P17152 192 aa14.42□□□□□ -0.1
CCDC12-208ENST00000603885 AQP4P55087 323 aa14.42□□□□□ -0.1
CCDC12-208ENST00000603885 CD83Q01151 205 aa14.42□□□□□ -0.1
CCDC12-208ENST00000603885 GPR50Q13585 617 aa14.42□□□□□ -0.1
CCDC12-208ENST00000603885 ACSM3Q53FZ2 586 aa14.42□□□□□ -0.1
CCDC12-208ENST00000603885 C8orf31Q8N9H6 132 aa14.42□□□□□ -0.1
CCDC12-208ENST00000603885 TMEM104Q8NE00 496 aa14.42□□□□□ -0.1
CCDC12-208ENST00000603885 Q96M66 194 aa14.42□□□□□ -0.1
CCDC12-208ENST00000603885 GHRLQ9UBU3 117 aa14.42□□□□□ -0.1
CCDC12-208ENST00000603885 NOTCH3Q9UM47 2321 aa14.41□□□□□ -0.1
CCDC12-208ENST00000603885 IGHV3-43A0A0B4J1X8 118 aa14.41□□□□□ -0.1
CCDC12-208ENST00000603885 CCRL2O00421 344 aa14.41□□□□□ -0.1
CCDC12-208ENST00000603885 SPINT2O43291 252 aa14.41□□□□□ -0.1
CCDC12-208ENST00000603885 CA11O75493 328 aa14.41□□□□□ -0.1
CCDC12-208ENST00000603885 GAPDHP04406 335 aaKnown RBP14.41□□□□□ -0.1
CCDC12-208ENST00000603885 IGHV3-43DP0DP04 118 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms