RNA–Protein interactions for RNA: ENST00000598471.1

UPF1-206, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-206ENST00000598471 RCC1P18754 421 aaPredicted RBP12.83□□□□□ -0.36
UPF1-206ENST00000598471 TSPAN5P62079 268 aa12.83□□□□□ -0.36
UPF1-206ENST00000598471 MEF2CQ06413 473 aaPredicted RBP12.83□□□□□ -0.36
UPF1-206ENST00000598471 HMGN3Q15651 99 aa12.83□□□□□ -0.36
UPF1-206ENST00000598471 TPRX1Q8N7U7 411 aa12.83□□□□□ -0.36
UPF1-206ENST00000598471 H1FXQ92522 213 aaKnown RBP12.83□□□□□ -0.36
UPF1-206ENST00000598471 LURAP1Q96LR2 239 aa12.83□□□□□ -0.36
UPF1-206ENST00000598471 PRRT1Q99946 306 aa12.83□□□□□ -0.36
UPF1-206ENST00000598471 TINAGL1Q9GZM7 467 aaPredicted RBP12.83□□□□□ -0.36
UPF1-206ENST00000598471 PATZ1Q9HBE1 687 aaKnown RBP12.83□□□□□ -0.36
UPF1-206ENST00000598471 TAF9BQ9HBM6 251 aa12.83□□□□□ -0.36
UPF1-206ENST00000598471 COPZ2Q9P299 210 aa12.83□□□□□ -0.36
UPF1-206ENST00000598471 OPN4Q9UHM6 478 aa12.83□□□□□ -0.36
UPF1-206ENST00000598471 USF3Q68DE3 2245 aa12.82□□□□□ -0.36
UPF1-206ENST00000598471 IGKV1D-8A0A087WSZ0 117 aa12.82□□□□□ -0.36
UPF1-206ENST00000598471 TRBV23-1A0A0A0MS06 115 aa12.82□□□□□ -0.36
UPF1-206ENST00000598471 DIRAS3O95661 229 aa12.82□□□□□ -0.36
UPF1-206ENST00000598471 GSTT2P0CG29 244 aa12.82□□□□□ -0.36
UPF1-206ENST00000598471 GZMHP20718 246 aa12.82□□□□□ -0.36
UPF1-206ENST00000598471 SEC61A1P61619 476 aaKnown RBP12.82□□□□□ -0.36
UPF1-206ENST00000598471 DEFB113Q30KQ7 82 aa12.82□□□□□ -0.36
UPF1-206ENST00000598471 FAAP20Q6NZ36 180 aa12.82□□□□□ -0.36
UPF1-206ENST00000598471 Q6ZPA2 131 aa12.82□□□□□ -0.36
UPF1-206ENST00000598471 LRRC75A-AS1Q8N1F1 130 aa12.82□□□□□ -0.36
UPF1-206ENST00000598471 OR4D10Q8NGI6 311 aa12.82□□□□□ -0.36
UPF1-206ENST00000598471 OR56B4Q8NH76 319 aa12.82□□□□□ -0.36
UPF1-206ENST00000598471 MRGPRDQ8TDS7 321 aa12.82□□□□□ -0.36
UPF1-206ENST00000598471 C10orf105Q8TEF2 133 aa12.82□□□□□ -0.36
UPF1-206ENST00000598471 CHPT1Q8WUD6 406 aa12.82□□□□□ -0.36
UPF1-206ENST00000598471 NINJ1Q92982 152 aa12.82□□□□□ -0.36
UPF1-206ENST00000598471 BPESC1Q9GZL8 116 aa12.82□□□□□ -0.36
UPF1-206ENST00000598471 CLN8Q9UBY8 286 aa12.82□□□□□ -0.36
UPF1-206ENST00000598471 LRBAP50851 2863 aa12.81□□□□□ -0.36
UPF1-206ENST00000598471 TRAV39A0A0B4J263 110 aa12.81□□□□□ -0.36
UPF1-206ENST00000598471 F5H0A9 414 aaPredicted RBP12.81□□□□□ -0.36
UPF1-206ENST00000598471 WNT2P09544 360 aa12.81□□□□□ -0.36
UPF1-206ENST00000598471 SCTP09683 121 aa12.81□□□□□ -0.36
UPF1-206ENST00000598471 OR5H8P0DN80 308 aa12.81□□□□□ -0.36
UPF1-206ENST00000598471 SLC6A1P30531 599 aa12.81□□□□□ -0.36
UPF1-206ENST00000598471 IL2RGP31785 369 aa12.81□□□□□ -0.36
UPF1-206ENST00000598471 RFX2P48378 723 aa12.81□□□□□ -0.36
UPF1-206ENST00000598471 RPL31P62899 125 aaKnown RBP12.81□□□□□ -0.36
UPF1-206ENST00000598471 CR1LQ2VPA4 569 aa12.81□□□□□ -0.36
UPF1-206ENST00000598471 SCGB2B2Q4G0G5 96 aa12.81□□□□□ -0.36
UPF1-206ENST00000598471 ESCO2Q56NI9 601 aa12.81□□□□□ -0.36
UPF1-206ENST00000598471 OVCH2Q7RTZ1 564 aa12.81□□□□□ -0.36
UPF1-206ENST00000598471 NRARPQ7Z6K4 114 aa12.81□□□□□ -0.36
UPF1-206ENST00000598471 OR51S1Q8NGJ8 323 aa12.81□□□□□ -0.36
UPF1-206ENST00000598471 OR13A1Q8NGR1 328 aa12.81□□□□□ -0.36
UPF1-206ENST00000598471 RAB39BQ96DA2 213 aa12.81□□□□□ -0.36
UPF1-206ENST00000598471 GINS4Q9BRT9 223 aa12.81□□□□□ -0.36
UPF1-206ENST00000598471 CABLES2Q9BTV7 478 aa12.81□□□□□ -0.36
UPF1-206ENST00000598471 NARFLQ9H6Q4 476 aa12.81□□□□□ -0.36
UPF1-206ENST00000598471 SLC2A8Q9NY64 477 aa12.81□□□□□ -0.36
UPF1-206ENST00000598471 UBE2J1Q9Y385 318 aaPredicted RBP12.81□□□□□ -0.36
UPF1-206ENST00000598471 LINC00312Q9Y6C7 94 aa12.81□□□□□ -0.36
UPF1-206ENST00000598471 CELSR2Q9HCU4 2923 aa12.8□□□□□ -0.36
UPF1-206ENST00000598471 CRYBG3Q68DQ2 2970 aa12.8□□□□□ -0.36
UPF1-206ENST00000598471 A0A1W2PPH5 198 aa12.8□□□□□ -0.36
UPF1-206ENST00000598471 ZNF729A6NN14 1252 aaPredicted RBP12.8□□□□□ -0.36
UPF1-206ENST00000598471 C12orf77C9JDV5 145 aa12.8□□□□□ -0.36
UPF1-206ENST00000598471 SDCBPO00560 298 aaPredicted RBP12.8□□□□□ -0.36
UPF1-206ENST00000598471 BET1O15155 118 aa12.8□□□□□ -0.36
UPF1-206ENST00000598471 HEXAP06865 529 aa12.8□□□□□ -0.36
UPF1-206ENST00000598471 BTCP35070 178 aa12.8□□□□□ -0.36
UPF1-206ENST00000598471 GNB2P62879 340 aa12.8□□□□□ -0.36
UPF1-206ENST00000598471 OXA1LQ15070 435 aa12.8□□□□□ -0.36
UPF1-206ENST00000598471 C11orf91Q3C1V1 193 aa12.8□□□□□ -0.36
UPF1-206ENST00000598471 TMEM30BQ3MIR4 351 aa12.8□□□□□ -0.36
UPF1-206ENST00000598471 WDR25Q64LD2 544 aaPredicted RBP12.8□□□□□ -0.36
UPF1-206ENST00000598471 PLET1Q6UQ28 207 aa12.8□□□□□ -0.36
UPF1-206ENST00000598471 FAM185AQ8N0U4 392 aa12.8□□□□□ -0.36
UPF1-206ENST00000598471 CENPSQ8N2Z9 138 aa12.8□□□□□ -0.36
UPF1-206ENST00000598471 PRR18Q8N4B5 295 aa12.8□□□□□ -0.36
UPF1-206ENST00000598471 OR6F1Q8NGZ6 308 aa12.8□□□□□ -0.36
UPF1-206ENST00000598471 OR10J5Q8NHC4 309 aa12.8□□□□□ -0.36
UPF1-206ENST00000598471 IL1F10Q8WWZ1 152 aa12.8□□□□□ -0.36
UPF1-206ENST00000598471 CORO2AQ92828 525 aa12.8□□□□□ -0.36
UPF1-206ENST00000598471 ARL11Q969Q4 196 aa12.8□□□□□ -0.36
UPF1-206ENST00000598471 GALMQ96C23 342 aa12.8□□□□□ -0.36
UPF1-206ENST00000598471 MBD6Q96DN6 1003 aa12.8□□□□□ -0.36
UPF1-206ENST00000598471 KIRREL1Q96J84 757 aa12.8□□□□□ -0.36
UPF1-206ENST00000598471 SLC6A7Q99884 636 aa12.8□□□□□ -0.36
UPF1-206ENST00000598471 GAL3ST2Q9H3Q3 398 aa12.8□□□□□ -0.36
UPF1-206ENST00000598471 TAS2R3Q9NYW6 316 aa12.8□□□□□ -0.36
UPF1-206ENST00000598471 HSPA12AO43301 675 aa12.79□□□□□ -0.36
UPF1-206ENST00000598471 HBZP02008 142 aa12.79□□□□□ -0.36
UPF1-206ENST00000598471 ZNF735P0CB33 412 aa12.79□□□□□ -0.36
UPF1-206ENST00000598471 SLC25A16P16260 332 aa12.79□□□□□ -0.36
UPF1-206ENST00000598471 CCR6P51684 374 aa12.79□□□□□ -0.36
UPF1-206ENST00000598471 RBMS2Q15434 407 aaKnown RBP12.79□□□□□ -0.36
UPF1-206ENST00000598471 CLEC12BQ2HXU8 276 aa12.79□□□□□ -0.36
UPF1-206ENST00000598471 IGSF11Q5DX21 431 aa12.79□□□□□ -0.36
UPF1-206ENST00000598471 CD276Q5ZPR3 534 aa12.79□□□□□ -0.36
UPF1-206ENST00000598471 ZNF841Q6ZN19 808 aa12.79□□□□□ -0.36
UPF1-206ENST00000598471 IDO2Q6ZQW0 420 aa12.79□□□□□ -0.36
UPF1-206ENST00000598471 FGFRL1Q8N441 504 aa12.79□□□□□ -0.36
UPF1-206ENST00000598471 DUSP18Q8NEJ0 188 aa12.79□□□□□ -0.36
UPF1-206ENST00000598471 SLC25A21Q9BQT8 299 aaPredicted RBP12.79□□□□□ -0.36
UPF1-206ENST00000598471 DCTN5Q9BTE1 182 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms