RNA–Protein interactions for RNA: ENST00000597828.5

SOX2-OT-228, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 864 nt, Biotype sense overlapping.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-228ENST00000597828 STX19Q8N4C7 294 aa9.54□□□□□ -0.88
SOX2-OT-228ENST00000597828 PXT1Q8NFP0 134 aa9.54□□□□□ -0.88
SOX2-OT-228ENST00000597828 BPIFB6Q8NFQ5 453 aa9.54□□□□□ -0.88
SOX2-OT-228ENST00000597828 OR51D1Q8NGF3 324 aa9.54□□□□□ -0.88
SOX2-OT-228ENST00000597828 OR5AK2Q8NH90 309 aa9.54□□□□□ -0.88
SOX2-OT-228ENST00000597828 ORAI1Q96D31 301 aa9.54□□□□□ -0.88
SOX2-OT-228ENST00000597828 CYYR1Q96J86 154 aa9.54□□□□□ -0.88
SOX2-OT-228ENST00000597828 GPER1Q99527 375 aa9.54□□□□□ -0.88
SOX2-OT-228ENST00000597828 ERVK13-1Q9NX77 482 aa9.54□□□□□ -0.88
SOX2-OT-228ENST00000597828 TPRKBQ9Y3C4 175 aa9.54□□□□□ -0.88
SOX2-OT-228ENST00000597828 HUWE1Q7Z6Z7 4374 aaKnown RBP9.54□□□□□ -0.88
SOX2-OT-228ENST00000597828 IGHV3-43A0A0B4J1X8 118 aa9.53□□□□□ -0.88
SOX2-OT-228ENST00000597828 A0A1W2PP11 408 aa9.53□□□□□ -0.88
SOX2-OT-228ENST00000597828 EFCAB10A6NFE3 127 aa9.53□□□□□ -0.88
SOX2-OT-228ENST00000597828 TMEM212A6NML5 194 aa9.53□□□□□ -0.88
SOX2-OT-228ENST00000597828 HSD17B6O14756 317 aa9.53□□□□□ -0.88
SOX2-OT-228ENST00000597828 GNAO1P09471 354 aa9.53□□□□□ -0.88
SOX2-OT-228ENST00000597828 IGHV3-43DP0DP04 118 aa9.53□□□□□ -0.88
SOX2-OT-228ENST00000597828 MYL12AP19105 171 aa9.53□□□□□ -0.88
SOX2-OT-228ENST00000597828 RAB3AP20336 220 aa9.53□□□□□ -0.88
SOX2-OT-228ENST00000597828 MYF6P23409 242 aa9.53□□□□□ -0.88
SOX2-OT-228ENST00000597828 C21orf33P30042 268 aaPredicted RBP9.53□□□□□ -0.88
SOX2-OT-228ENST00000597828 RAB7AP51149 207 aa9.53□□□□□ -0.88
SOX2-OT-228ENST00000597828 ZNF529Q6P280 563 aa9.53□□□□□ -0.88
SOX2-OT-228ENST00000597828 SLC35E3Q7Z769 313 aa9.53□□□□□ -0.88
SOX2-OT-228ENST00000597828 STPG2Q8N412 459 aa9.53□□□□□ -0.88
SOX2-OT-228ENST00000597828 ZNF565Q8N9K5 539 aa9.53□□□□□ -0.88
SOX2-OT-228ENST00000597828 SUMF2Q8NBJ7 301 aa9.53□□□□□ -0.88
SOX2-OT-228ENST00000597828 OR52I1Q8NGK6 324 aa9.53□□□□□ -0.88
SOX2-OT-228ENST00000597828 OR5D14Q8NGL3 314 aa9.53□□□□□ -0.88
SOX2-OT-228ENST00000597828 OR10X1Q8NGY0 326 aa9.53□□□□□ -0.88
SOX2-OT-228ENST00000597828 CHPT1Q8WUD6 406 aa9.53□□□□□ -0.88
SOX2-OT-228ENST00000597828 DPF1Q92782 380 aa9.53□□□□□ -0.88
SOX2-OT-228ENST00000597828 P2RX4Q99571 388 aa9.53□□□□□ -0.88
SOX2-OT-228ENST00000597828 JAM3Q9BX67 310 aa9.53□□□□□ -0.88
SOX2-OT-228ENST00000597828 LINC00574Q9H8X3 128 aa9.53□□□□□ -0.88
SOX2-OT-228ENST00000597828 PCDHB16Q9NRJ7 776 aa9.53□□□□□ -0.88
SOX2-OT-228ENST00000597828 BLOC1S6Q9UL45 172 aa9.53□□□□□ -0.88
SOX2-OT-228ENST00000597828 IGHV1-3A0A0C4DH29 117 aa9.52□□□□□ -0.89
SOX2-OT-228ENST00000597828 PTGES3LE9PB15 166 aa9.52□□□□□ -0.89
SOX2-OT-228ENST00000597828 SLC31A2O15432 143 aa9.52□□□□□ -0.89
SOX2-OT-228ENST00000597828 FGF16O43320 207 aa9.52□□□□□ -0.89
SOX2-OT-228ENST00000597828 IGHG2P01859 326 aa9.52□□□□□ -0.89
SOX2-OT-228ENST00000597828 RPLP1P05386 114 aaKnown RBP9.52□□□□□ -0.89
SOX2-OT-228ENST00000597828 SERPINA2P20848 420 aa9.52□□□□□ -0.89
SOX2-OT-228ENST00000597828 DCKP27707 260 aa9.52□□□□□ -0.89
SOX2-OT-228ENST00000597828 RAB25P57735 213 aa9.52□□□□□ -0.89
SOX2-OT-228ENST00000597828 ZNF816Q0VGE8 651 aaPredicted RBP9.52□□□□□ -0.89
SOX2-OT-228ENST00000597828 RSU1Q15404 277 aa9.52□□□□□ -0.89
SOX2-OT-228ENST00000597828 C6orf141Q5SZD1 244 aa9.52□□□□□ -0.89
SOX2-OT-228ENST00000597828 LAIR2Q6ISS4 152 aa9.52□□□□□ -0.89
SOX2-OT-228ENST00000597828 TMPRSS11AQ6ZMR5 421 aa9.52□□□□□ -0.89
SOX2-OT-228ENST00000597828 MOB3BQ86TA1 216 aa9.52□□□□□ -0.89
SOX2-OT-228ENST00000597828 OR8H3Q8N146 312 aa9.52□□□□□ -0.89
SOX2-OT-228ENST00000597828 OR13C5Q8NGS8 318 aa9.52□□□□□ -0.89
SOX2-OT-228ENST00000597828 FBLIM1Q8WUP2 373 aa9.52□□□□□ -0.89
SOX2-OT-228ENST00000597828 TMEM80Q96HE8 168 aa9.52□□□□□ -0.89
SOX2-OT-228ENST00000597828 RAX2Q96IS3 184 aa9.52□□□□□ -0.89
SOX2-OT-228ENST00000597828 EAF1Q96JC9 268 aaPredicted RBP9.52□□□□□ -0.89
SOX2-OT-228ENST00000597828 B9D2Q9BPU9 175 aa9.52□□□□□ -0.89
SOX2-OT-228ENST00000597828 DPCDQ9BVM2 203 aaPredicted RBP9.52□□□□□ -0.89
SOX2-OT-228ENST00000597828 ANKRD60Q9BZ19 345 aa9.52□□□□□ -0.89
SOX2-OT-228ENST00000597828 BARHL1Q9BZE3 327 aa9.52□□□□□ -0.89
SOX2-OT-228ENST00000597828 FGF20Q9NP95 211 aaPredicted RBP9.52□□□□□ -0.89
SOX2-OT-228ENST00000597828 MAGEA13PA6NCF6 341 aa9.51□□□□□ -0.89
SOX2-OT-228ENST00000597828 ZNF736B4DX44 427 aaPredicted RBP9.51□□□□□ -0.89
SOX2-OT-228ENST00000597828 C15orf65H3BRN8 121 aa9.51□□□□□ -0.89
SOX2-OT-228ENST00000597828 GEMIN2O14893 280 aaKnown RBP9.51□□□□□ -0.89
SOX2-OT-228ENST00000597828 DENRO43583 198 aaKnown RBP9.51□□□□□ -0.89
SOX2-OT-228ENST00000597828 OR7C1O76099 320 aaPredicted RBP9.51□□□□□ -0.89
SOX2-OT-228ENST00000597828 RPSAP08865 295 aaKnown RBP9.51□□□□□ -0.89
SOX2-OT-228ENST00000597828 LIMS3P0CW19 117 aa9.51□□□□□ -0.89
SOX2-OT-228ENST00000597828 LIMS4P0CW20 117 aa9.51□□□□□ -0.89
SOX2-OT-228ENST00000597828 LUMP51884 338 aaPredicted RBP9.51□□□□□ -0.89
SOX2-OT-228ENST00000597828 GBX2P52951 348 aaPredicted RBP9.51□□□□□ -0.89
SOX2-OT-228ENST00000597828 RBM11P57052 281 aaKnown RBP9.51□□□□□ -0.89
SOX2-OT-228ENST00000597828 PAX5Q02548 391 aa9.51□□□□□ -0.89
SOX2-OT-228ENST00000597828 DDI2Q5TDH0 399 aa9.51□□□□□ -0.89
SOX2-OT-228ENST00000597828 Q8N6K4 173 aa9.51□□□□□ -0.89
SOX2-OT-228ENST00000597828 Q8NFD4 153 aa9.51□□□□□ -0.89
SOX2-OT-228ENST00000597828 HAVCR2Q8TDQ0 301 aa9.51□□□□□ -0.89
SOX2-OT-228ENST00000597828 CCDC107Q8WV48 283 aa9.51□□□□□ -0.89
SOX2-OT-228ENST00000597828 GGHQ92820 318 aa9.51□□□□□ -0.89
SOX2-OT-228ENST00000597828 NCOR1P1Q9H4R4 102 aa9.51□□□□□ -0.89
SOX2-OT-228ENST00000597828 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.51□□□□□ -0.89
SOX2-OT-228ENST00000597828 PLCXD1Q9NUJ7 323 aa9.51□□□□□ -0.89
SOX2-OT-228ENST00000597828 ING4Q9UNL4 249 aa9.51□□□□□ -0.89
SOX2-OT-228ENST00000597828 ST3GAL6Q9Y274 331 aa9.51□□□□□ -0.89
SOX2-OT-228ENST00000597828 NCBP2LA6PVI3 153 aaKnown RBP9.5□□□□□ -0.89
SOX2-OT-228ENST00000597828 CCRL2O00421 344 aa9.5□□□□□ -0.89
SOX2-OT-228ENST00000597828 SDCBPO00560 298 aaPredicted RBP9.5□□□□□ -0.89
SOX2-OT-228ENST00000597828 MAGEB3O15480 346 aa9.5□□□□□ -0.89
SOX2-OT-228ENST00000597828 MYCNOSP40205 109 aa9.5□□□□□ -0.89
SOX2-OT-228ENST00000597828 GPR12P47775 334 aa9.5□□□□□ -0.89
SOX2-OT-228ENST00000597828 SLC35B1P78383 322 aa9.5□□□□□ -0.89
SOX2-OT-228ENST00000597828 ST3GAL4Q11206 333 aa9.5□□□□□ -0.89
SOX2-OT-228ENST00000597828 EBI3Q14213 229 aa9.5□□□□□ -0.89
SOX2-OT-228ENST00000597828 RBM48Q5RL73 367 aaKnown RBP9.5□□□□□ -0.89
SOX2-OT-228ENST00000597828 OR2G6Q5TZ20 316 aa9.5□□□□□ -0.89
SOX2-OT-228ENST00000597828 ASCL4Q6XD76 172 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms