RNA–Protein interactions for RNA: ENST00000595231.5

SNRNP70-204, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 1,673 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-204ENST00000595231 CMSS1Q9BQ75 279 aaKnown RBP18.48■□□□□ 0.55
SNRNP70-204ENST00000595231 RIMS4Q9H426 269 aaPredicted RBP18.48■□□□□ 0.55
SNRNP70-204ENST00000595231 METTL8Q9H825 291 aaKnown RBP18.48■□□□□ 0.55
SNRNP70-204ENST00000595231 LINC00574Q9H8X3 128 aa18.48■□□□□ 0.55
SNRNP70-204ENST00000595231 UNKLQ9H9P5 680 aaKnown RBP18.48■□□□□ 0.55
SNRNP70-204ENST00000595231 TRBV6-6A0A0A6YYG2 114 aa18.47■□□□□ 0.55
SNRNP70-204ENST00000595231 KBTBD11-OT1A0A1B0GTJ5 212 aa18.47■□□□□ 0.55
SNRNP70-204ENST00000595231 TMEM235A6NFC5 223 aa18.47■□□□□ 0.55
SNRNP70-204ENST00000595231 ZNF729A6NN14 1252 aaPredicted RBP18.47■□□□□ 0.55
SNRNP70-204ENST00000595231 MMP23AO75900 390 aa18.47■□□□□ 0.55
SNRNP70-204ENST00000595231 ZNF880Q6PDB4 577 aa18.47■□□□□ 0.55
SNRNP70-204ENST00000595231 VMO1Q7Z5L0 202 aa18.47■□□□□ 0.55
SNRNP70-204ENST00000595231 TNFRSF14Q92956 283 aa18.47■□□□□ 0.55
SNRNP70-204ENST00000595231 C6orf62Q9GZU0 229 aaPredicted RBP18.47■□□□□ 0.55
SNRNP70-204ENST00000595231 C12orf4Q9NQ89 552 aa18.47■□□□□ 0.55
SNRNP70-204ENST00000595231 SIRT7Q9NRC8 400 aa18.47■□□□□ 0.55
SNRNP70-204ENST00000595231 MTORP42345 2549 aa18.47■□□□□ 0.55
SNRNP70-204ENST00000595231 NSD1Q96L73 2696 aaPredicted RBP18.47■□□□□ 0.55
SNRNP70-204ENST00000595231 RBP4P02753 201 aa18.47■□□□□ 0.55
SNRNP70-204ENST00000595231 MELTFP08582 738 aa18.47■□□□□ 0.55
SNRNP70-204ENST00000595231 PRTN3P24158 256 aa18.47■□□□□ 0.55
SNRNP70-204ENST00000595231 SSTR5P35346 364 aa18.47■□□□□ 0.55
SNRNP70-204ENST00000595231 GAL3ST2Q9H3Q3 398 aa18.47■□□□□ 0.55
SNRNP70-204ENST00000595231 AUNIPQ9H7T9 357 aa18.47■□□□□ 0.55
SNRNP70-204ENST00000595231 CALYQ9NYX4 217 aa18.47■□□□□ 0.55
SNRNP70-204ENST00000595231 NPIPB11E5RHQ5 1161 aa18.46■□□□□ 0.55
SNRNP70-204ENST00000595231 C15orf65H3BRN8 121 aa18.46■□□□□ 0.55
SNRNP70-204ENST00000595231 ORC5O43913 435 aa18.46■□□□□ 0.55
SNRNP70-204ENST00000595231 CD3GP09693 182 aa18.46■□□□□ 0.55
SNRNP70-204ENST00000595231 OMGP23515 440 aa18.46■□□□□ 0.55
SNRNP70-204ENST00000595231 PRB3Q04118 309 aaPredicted RBP18.46■□□□□ 0.55
SNRNP70-204ENST00000595231 TMEM69Q5SWH9 247 aa18.46■□□□□ 0.55
SNRNP70-204ENST00000595231 HEPN1Q6WQI6 88 aa18.46■□□□□ 0.55
SNRNP70-204ENST00000595231 C5orf24Q7Z6I8 188 aa18.46■□□□□ 0.55
SNRNP70-204ENST00000595231 MMP27Q9H306 513 aa18.46■□□□□ 0.55
SNRNP70-204ENST00000595231 CHMP1AQ9HD42 196 aaPredicted RBP18.46■□□□□ 0.55
SNRNP70-204ENST00000595231 A3GALT2U3KPV4 340 aa18.46■□□□□ 0.55
SNRNP70-204ENST00000595231 MXRA5Q9NR99 2828 aa18.45■□□□□ 0.54
SNRNP70-204ENST00000595231 hCG_1809904A0A1W2PP81 198 aa18.45■□□□□ 0.54
SNRNP70-204ENST00000595231 A0A1W2PPE2 198 aa18.45■□□□□ 0.54
SNRNP70-204ENST00000595231 A0A1W2PR64 198 aa18.45■□□□□ 0.54
SNRNP70-204ENST00000595231 A0A1W2PRV1 198 aa18.45■□□□□ 0.54
SNRNP70-204ENST00000595231 FAM25AB3EWG3 89 aa18.45■□□□□ 0.54
SNRNP70-204ENST00000595231 FAM25CB3EWG5 89 aa18.45■□□□□ 0.54
SNRNP70-204ENST00000595231 FAM25GB3EWG6 89 aa18.45■□□□□ 0.54
SNRNP70-204ENST00000595231 C12orf77C9JDV5 145 aa18.45■□□□□ 0.54
SNRNP70-204ENST00000595231 FSHBP01225 129 aa18.45■□□□□ 0.54
SNRNP70-204ENST00000595231 HLA-DQB1P01920 261 aa18.45■□□□□ 0.54
SNRNP70-204ENST00000595231 IGHV1-8P0DP01 117 aa18.45■□□□□ 0.54
SNRNP70-204ENST00000595231 PTHLHP12272 177 aa18.45■□□□□ 0.54
SNRNP70-204ENST00000595231 GDNFP39905 211 aa18.45■□□□□ 0.54
SNRNP70-204ENST00000595231 TAS2R20P59543 309 aa18.45■□□□□ 0.54
SNRNP70-204ENST00000595231 PNLIPRP3Q17RR3 467 aa18.45■□□□□ 0.54
SNRNP70-204ENST00000595231 KLF17Q5JT82 389 aaPredicted RBP18.45■□□□□ 0.54
SNRNP70-204ENST00000595231 RFESDQ8TAC1 157 aa18.45■□□□□ 0.54
SNRNP70-204ENST00000595231 POM121CA8CG34 1229 aa18.44■□□□□ 0.54
SNRNP70-204ENST00000595231 SSX5O60225 188 aa18.44■□□□□ 0.54
SNRNP70-204ENST00000595231 CLPXO76031 633 aa18.44■□□□□ 0.54
SNRNP70-204ENST00000595231 ARFRP1Q13795 201 aa18.44■□□□□ 0.54
SNRNP70-204ENST00000595231 IL17RELQ6ZVW7 336 aa18.44■□□□□ 0.54
SNRNP70-204ENST00000595231 ARL11Q969Q4 196 aa18.44■□□□□ 0.54
SNRNP70-204ENST00000595231 TAF9BQ9HBM6 251 aa18.44■□□□□ 0.54
SNRNP70-204ENST00000595231 Q9N2K0 584 aa18.44■□□□□ 0.54
SNRNP70-204ENST00000595231 INAFM1C9JVW0 142 aa18.44■□□□□ 0.54
SNRNP70-204ENST00000595231 FCGR3AP08637 254 aa18.44■□□□□ 0.54
SNRNP70-204ENST00000595231 C6orf183Q5T699 404 aa18.44■□□□□ 0.54
SNRNP70-204ENST00000595231 PRAMEF5Q5TYX0 476 aa18.44■□□□□ 0.54
SNRNP70-204ENST00000595231 HCP5Q6MZN7 132 aa18.44■□□□□ 0.54
SNRNP70-204ENST00000595231 BAIAP2L2Q6UXY1 529 aa18.44■□□□□ 0.54
SNRNP70-204ENST00000595231 ZNF782Q6ZMW2 699 aaPredicted RBP18.44■□□□□ 0.54
SNRNP70-204ENST00000595231 ZNF554Q86TJ5 538 aa18.44■□□□□ 0.54
SNRNP70-204ENST00000595231 UBALD1Q8TB05 177 aa18.44■□□□□ 0.54
SNRNP70-204ENST00000595231 NUDCD2Q8WVJ2 157 aa18.44■□□□□ 0.54
SNRNP70-204ENST00000595231 KIRREL1Q96J84 757 aa18.44■□□□□ 0.54
SNRNP70-204ENST00000595231 EXTL2Q9UBQ6 330 aa18.44■□□□□ 0.54
SNRNP70-204ENST00000595231 CENPVL3A0A0U1RRI6 287 aa18.43■□□□□ 0.54
SNRNP70-204ENST00000595231 RNASEK-C17orf49H0YIS7 233 aa18.43■□□□□ 0.54
SNRNP70-204ENST00000595231 HOXB4P17483 251 aaPredicted RBP18.43■□□□□ 0.54
SNRNP70-204ENST00000595231 MRPS15P82914 257 aaKnown RBP18.43■□□□□ 0.54
SNRNP70-204ENST00000595231 CNIH2Q6PI25 160 aa18.43■□□□□ 0.54
SNRNP70-204ENST00000595231 TRAT1Q6PIZ9 186 aa18.43■□□□□ 0.54
SNRNP70-204ENST00000595231 ZNF230Q9UIE0 474 aaPredicted RBP18.43■□□□□ 0.54
SNRNP70-204ENST00000595231 ZFHX3Q15911 3703 aa18.43■□□□□ 0.54
SNRNP70-204ENST00000595231 FN1P02751 2386 aaKnown RBP18.43■□□□□ 0.54
SNRNP70-204ENST00000595231 IGHV4-38-2P0DP08 117 aa18.42■□□□□ 0.54
SNRNP70-204ENST00000595231 TNFSF8P32971 234 aa18.42■□□□□ 0.54
SNRNP70-204ENST00000595231 MNDAP41218 407 aa18.42■□□□□ 0.54
SNRNP70-204ENST00000595231 PITPNAQ00169 270 aa18.42■□□□□ 0.54
SNRNP70-204ENST00000595231 KLRD1Q13241 179 aa18.42■□□□□ 0.54
SNRNP70-204ENST00000595231 MADCAM1Q13477 382 aa18.42■□□□□ 0.54
SNRNP70-204ENST00000595231 HMGN3Q15651 99 aa18.42■□□□□ 0.54
SNRNP70-204ENST00000595231 CNPY1Q3B7I2 92 aa18.42■□□□□ 0.54
SNRNP70-204ENST00000595231 UTF1Q5T230 341 aa18.42■□□□□ 0.54
SNRNP70-204ENST00000595231 NANPQ8TBE9 248 aa18.42■□□□□ 0.54
SNRNP70-204ENST00000595231 SETD6Q8TBK2 473 aa18.42■□□□□ 0.54
SNRNP70-204ENST00000595231 LHX4Q969G2 390 aa18.42■□□□□ 0.54
SNRNP70-204ENST00000595231 MRPS7Q9Y2R9 242 aaKnown RBP18.42■□□□□ 0.54
SNRNP70-204ENST00000595231 TRAV40A0A0B4J280 105 aa18.41■□□□□ 0.54
SNRNP70-204ENST00000595231 HBZP02008 142 aa18.41■□□□□ 0.54
SNRNP70-204ENST00000595231 GNG2P59768 71 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms