RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 RNLSQ5VYX0 342 aa11.09□□□□□ -0.63
APOC1-208ENST00000592535 CCDC144NLQ6NUI1 221 aa11.09□□□□□ -0.63
APOC1-208ENST00000592535 CDH26Q8IXH8 852 aa11.09□□□□□ -0.63
APOC1-208ENST00000592535 OR10A7Q8NGE5 316 aa11.09□□□□□ -0.63
APOC1-208ENST00000592535 UBALD1Q8TB05 177 aa11.09□□□□□ -0.63
APOC1-208ENST00000592535 CCDC107Q8WV48 283 aa11.09□□□□□ -0.63
APOC1-208ENST00000592535 RPEQ96AT9 228 aa11.09□□□□□ -0.63
APOC1-208ENST00000592535 RBM14Q96PK6 669 aaKnown RBP11.09□□□□□ -0.63
APOC1-208ENST00000592535 OCSTAMPQ9BR26 566 aa11.09□□□□□ -0.63
APOC1-208ENST00000592535 BANF2Q9H503 90 aa11.09□□□□□ -0.63
APOC1-208ENST00000592535 RCC2Q9P258 522 aaKnown RBP11.09□□□□□ -0.63
APOC1-208ENST00000592535 LSM2Q9Y333 95 aaKnown RBP11.09□□□□□ -0.63
APOC1-208ENST00000592535 PLXNB1O43157 2135 aa11.09□□□□□ -0.63
APOC1-208ENST00000592535 A0A1W2PPE3 182 aa11.08□□□□□ -0.64
APOC1-208ENST00000592535 SH2D7A6NKC9 451 aaPredicted RBP11.08□□□□□ -0.64
APOC1-208ENST00000592535 C15orf65H3BRN8 121 aa11.08□□□□□ -0.64
APOC1-208ENST00000592535 OR2F2O95006 317 aa11.08□□□□□ -0.64
APOC1-208ENST00000592535 MT-ND4P03905 459 aa11.08□□□□□ -0.64
APOC1-208ENST00000592535 MGMTP16455 207 aa11.08□□□□□ -0.64
APOC1-208ENST00000592535 GZMHP20718 246 aa11.08□□□□□ -0.64
APOC1-208ENST00000592535 MAPK3P27361 379 aaPredicted RBP11.08□□□□□ -0.64
APOC1-208ENST00000592535 NSUN5P1Q3KNT7 163 aa11.08□□□□□ -0.64
APOC1-208ENST00000592535 ACSM3Q53FZ2 586 aa11.08□□□□□ -0.64
APOC1-208ENST00000592535 FAM27D1Q5T7N8 215 aa11.08□□□□□ -0.64
APOC1-208ENST00000592535 FAM53AQ6NSI3 398 aaPredicted RBP11.08□□□□□ -0.64
APOC1-208ENST00000592535 ZNF497Q6ZNH5 498 aa11.08□□□□□ -0.64
APOC1-208ENST00000592535 SLC16A12Q6ZSM3 486 aa11.08□□□□□ -0.64
APOC1-208ENST00000592535 C1QL4Q86Z23 238 aa11.08□□□□□ -0.64
APOC1-208ENST00000592535 NKAIN3Q8N8D7 197 aa11.08□□□□□ -0.64
APOC1-208ENST00000592535 TMEM104Q8NE00 496 aa11.08□□□□□ -0.64
APOC1-208ENST00000592535 CAPSLQ8WWF8 208 aa11.08□□□□□ -0.64
APOC1-208ENST00000592535 THRSPQ92748 146 aa11.08□□□□□ -0.64
APOC1-208ENST00000592535 MYDGFQ969H8 173 aa11.08□□□□□ -0.64
APOC1-208ENST00000592535 ARL11Q969Q4 196 aa11.08□□□□□ -0.64
APOC1-208ENST00000592535 MRPS24Q96EL2 167 aaKnown RBP11.08□□□□□ -0.64
APOC1-208ENST00000592535 CYYR1Q96J86 154 aa11.08□□□□□ -0.64
APOC1-208ENST00000592535 AKR1E2Q96JD6 320 aa11.08□□□□□ -0.64
APOC1-208ENST00000592535 SELENOIQ9C0D9 397 aa11.08□□□□□ -0.64
APOC1-208ENST00000592535 SCN3BQ9NY72 215 aa11.08□□□□□ -0.64
APOC1-208ENST00000592535 A0A1W2PPI3 338 aa11.07□□□□□ -0.64
APOC1-208ENST00000592535 FAM90A18PA6NE21 464 aa11.07□□□□□ -0.64
APOC1-208ENST00000592535 FAM90A16PA6NEW6 464 aa11.07□□□□□ -0.64
APOC1-208ENST00000592535 FAM90A20PA6NIJ5 464 aa11.07□□□□□ -0.64
APOC1-208ENST00000592535 FAM90A9PA6NNJ1 464 aa11.07□□□□□ -0.64
APOC1-208ENST00000592535 FAM90A12PA8MX19 464 aa11.07□□□□□ -0.64
APOC1-208ENST00000592535 FAM90A5PA8MXJ8 464 aa11.07□□□□□ -0.64
APOC1-208ENST00000592535 MCRIP1C9JLW8 97 aa11.07□□□□□ -0.64
APOC1-208ENST00000592535 AIPO00170 330 aa11.07□□□□□ -0.64
APOC1-208ENST00000592535 CRTAPO75718 401 aaPredicted RBP11.07□□□□□ -0.64
APOC1-208ENST00000592535 AMY1AP04745 511 aa11.07□□□□□ -0.64
APOC1-208ENST00000592535 AMY2AP04746 511 aa11.07□□□□□ -0.64
APOC1-208ENST00000592535 FAM90A15PP0C7V4 464 aa11.07□□□□□ -0.64
APOC1-208ENST00000592535 FAM90A13PP0C7W8 464 aa11.07□□□□□ -0.64
APOC1-208ENST00000592535 FAM90A14PP0C7W9 464 aa11.07□□□□□ -0.64
APOC1-208ENST00000592535 FAM90A24PP0C7X0 464 aa11.07□□□□□ -0.64
APOC1-208ENST00000592535 HSPA13P48723 471 aa11.07□□□□□ -0.64
APOC1-208ENST00000592535 GP2P55259 537 aaKnown RBP11.07□□□□□ -0.64
APOC1-208ENST00000592535 MADCAM1Q13477 382 aa11.07□□□□□ -0.64
APOC1-208ENST00000592535 IRF3Q14653 427 aa11.07□□□□□ -0.64
APOC1-208ENST00000592535 SPHARQ15513 63 aa11.07□□□□□ -0.64
APOC1-208ENST00000592535 MED22Q15528 200 aa11.07□□□□□ -0.64
APOC1-208ENST00000592535 ABCA11PQ4W5N1 156 aa11.07□□□□□ -0.64
APOC1-208ENST00000592535 PDLIM3Q53GG5 364 aaPredicted RBP11.07□□□□□ -0.64
APOC1-208ENST00000592535 RAB12Q6IQ22 244 aa11.07□□□□□ -0.64
APOC1-208ENST00000592535 UNQ9370/PRO34162Q6UXP9 181 aa11.07□□□□□ -0.64
APOC1-208ENST00000592535 OR4K15Q8NH41 348 aa11.07□□□□□ -0.64
APOC1-208ENST00000592535 OR56B4Q8NH76 319 aa11.07□□□□□ -0.64
APOC1-208ENST00000592535 CITED2Q99967 270 aaPredicted RBP11.07□□□□□ -0.64
APOC1-208ENST00000592535 TMED9Q9BVK6 235 aa11.07□□□□□ -0.64
APOC1-208ENST00000592535 SPACA1Q9HBV2 294 aa11.07□□□□□ -0.64
APOC1-208ENST00000592535 RAB26Q9ULW5 256 aa11.07□□□□□ -0.64
APOC1-208ENST00000592535 IGHV3-43A0A0B4J1X8 118 aa11.06□□□□□ -0.64
APOC1-208ENST00000592535 ADARB2-AS1A8MUL3 147 aa11.06□□□□□ -0.64
APOC1-208ENST00000592535 SDCBPO00560 298 aaPredicted RBP11.06□□□□□ -0.64
APOC1-208ENST00000592535 DENRO43583 198 aaKnown RBP11.06□□□□□ -0.64
APOC1-208ENST00000592535 ORC5O43913 435 aa11.06□□□□□ -0.64
APOC1-208ENST00000592535 OPN1MWP04001 364 aa11.06□□□□□ -0.64
APOC1-208ENST00000592535 LPLP06858 475 aa11.06□□□□□ -0.64
APOC1-208ENST00000592535 SNRNP70P08621 437 aaKnown RBP11.06□□□□□ -0.64
APOC1-208ENST00000592535 OPN1MW2P0DN77 364 aa11.06□□□□□ -0.64
APOC1-208ENST00000592535 OPN1MW3P0DN78 364 aa11.06□□□□□ -0.64
APOC1-208ENST00000592535 IGHV3-43DP0DP04 118 aa11.06□□□□□ -0.64
APOC1-208ENST00000592535 LOXL3P58215 753 aa11.06□□□□□ -0.64
APOC1-208ENST00000592535 SLC35A2P78381 396 aa11.06□□□□□ -0.64
APOC1-208ENST00000592535 SIGIRRQ6IA17 410 aa11.06□□□□□ -0.64
APOC1-208ENST00000592535 LRRTM1Q86UE6 522 aa11.06□□□□□ -0.64
APOC1-208ENST00000592535 MS4A15Q8N5U1 240 aa11.06□□□□□ -0.64
APOC1-208ENST00000592535 DRAM1Q8N682 238 aa11.06□□□□□ -0.64
APOC1-208ENST00000592535 OR52M1Q8NGK5 317 aa11.06□□□□□ -0.64
APOC1-208ENST00000592535 OR10X1Q8NGY0 326 aa11.06□□□□□ -0.64
APOC1-208ENST00000592535 FAM46BQ96A09 425 aa11.06□□□□□ -0.64
APOC1-208ENST00000592535 Q96M66 194 aa11.06□□□□□ -0.64
APOC1-208ENST00000592535 UQCC2Q9BRT2 126 aa11.06□□□□□ -0.64
APOC1-208ENST00000592535 GFOD1Q9NXC2 390 aa11.06□□□□□ -0.64
APOC1-208ENST00000592535 ETAA1Q9NY74 926 aa11.06□□□□□ -0.64
APOC1-208ENST00000592535 TRAPPC2LQ9UL33 140 aa11.06□□□□□ -0.64
APOC1-208ENST00000592535 PEX16Q9Y5Y5 336 aa11.06□□□□□ -0.64
APOC1-208ENST00000592535 FAM90A10PA6NDY2 464 aa11.05□□□□□ -0.64
APOC1-208ENST00000592535 FAM90A7PA6NKC0 464 aa11.05□□□□□ -0.64
APOC1-208ENST00000592535 FAM90A23PA8MXZ1 464 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms