RNA–Protein interactions for RNA: ENST00000590239.5

DDX39A-211, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 565 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-211ENST00000590239 RCC1P18754 421 aaPredicted RBP12.54□□□□□ -0.4
DDX39A-211ENST00000590239 USF1P22415 310 aaPredicted RBP12.54□□□□□ -0.4
DDX39A-211ENST00000590239 TAS2R46P59540 309 aa12.54□□□□□ -0.4
DDX39A-211ENST00000590239 TAS2R19P59542 299 aa12.54□□□□□ -0.4
DDX39A-211ENST00000590239 SEC61A1P61619 476 aaKnown RBP12.54□□□□□ -0.4
DDX39A-211ENST00000590239 DCTN2Q13561 401 aaKnown RBP12.54□□□□□ -0.4
DDX39A-211ENST00000590239 KLF9Q13886 244 aaPredicted RBP12.54□□□□□ -0.4
DDX39A-211ENST00000590239 C16orf87Q6PH81 154 aa12.54□□□□□ -0.4
DDX39A-211ENST00000590239 BTN2A1Q7KYR7 527 aa12.54□□□□□ -0.4
DDX39A-211ENST00000590239 KRTAP1-3Q8IUG1 177 aa12.54□□□□□ -0.4
DDX39A-211ENST00000590239 LYSMD2Q8IV50 215 aa12.54□□□□□ -0.4
DDX39A-211ENST00000590239 TOMM5Q8N4H5 51 aa12.54□□□□□ -0.4
DDX39A-211ENST00000590239 C8orf46Q8TAG6 207 aa12.54□□□□□ -0.4
DDX39A-211ENST00000590239 SNAPC3Q92966 411 aa12.54□□□□□ -0.4
DDX39A-211ENST00000590239 DCTN5Q9BTE1 182 aa12.54□□□□□ -0.4
DDX39A-211ENST00000590239 RAB9BQ9NP90 201 aa12.54□□□□□ -0.4
DDX39A-211ENST00000590239 C19orf12Q9NSK7 152 aa12.54□□□□□ -0.4
DDX39A-211ENST00000590239 ANXA10Q9UJ72 324 aa12.54□□□□□ -0.4
DDX39A-211ENST00000590239 UBE2J1Q9Y385 318 aaPredicted RBP12.54□□□□□ -0.4
DDX39A-211ENST00000590239 IGKV1D-8A0A087WSZ0 117 aa12.53□□□□□ -0.4
DDX39A-211ENST00000590239 TRAV39A0A0B4J263 110 aa12.53□□□□□ -0.4
DDX39A-211ENST00000590239 ZNF736B4DX44 427 aaPredicted RBP12.53□□□□□ -0.4
DDX39A-211ENST00000590239 CGB3P0DN86 165 aa12.53□□□□□ -0.4
DDX39A-211ENST00000590239 CGB7P0DN87 165 aa12.53□□□□□ -0.4
DDX39A-211ENST00000590239 GLP1RP43220 463 aa12.53□□□□□ -0.4
DDX39A-211ENST00000590239 HLA-DRB3P79483 266 aa12.53□□□□□ -0.4
DDX39A-211ENST00000590239 DYRK1AQ13627 763 aa12.53□□□□□ -0.4
DDX39A-211ENST00000590239 HMGN3Q15651 99 aa12.53□□□□□ -0.4
DDX39A-211ENST00000590239 ACTBL2Q562R1 376 aa12.53□□□□□ -0.4
DDX39A-211ENST00000590239 ZNF57Q68EA5 555 aaPredicted RBP12.53□□□□□ -0.4
DDX39A-211ENST00000590239 TMEM200BQ69YZ2 307 aa12.53□□□□□ -0.4
DDX39A-211ENST00000590239 OR52W1Q6IF63 320 aa12.53□□□□□ -0.4
DDX39A-211ENST00000590239 OR5AP2Q8NGF4 316 aa12.53□□□□□ -0.4
DDX39A-211ENST00000590239 OR4A4PQ8NGN8 299 aa12.53□□□□□ -0.4
DDX39A-211ENST00000590239 OR13A1Q8NGR1 328 aa12.53□□□□□ -0.4
DDX39A-211ENST00000590239 MRGPRDQ8TDS7 321 aa12.53□□□□□ -0.4
DDX39A-211ENST00000590239 MAFIPQ8WZ33 124 aa12.53□□□□□ -0.4
DDX39A-211ENST00000590239 DMRTB1Q96MA1 342 aa12.53□□□□□ -0.4
DDX39A-211ENST00000590239 LINC00574Q9H8X3 128 aa12.53□□□□□ -0.4
DDX39A-211ENST00000590239 TAF9BQ9HBM6 251 aa12.53□□□□□ -0.4
DDX39A-211ENST00000590239 TAS2R3Q9NYW6 316 aa12.53□□□□□ -0.4
DDX39A-211ENST00000590239 RPUSD1Q9UJJ7 312 aaKnown RBP12.53□□□□□ -0.4
DDX39A-211ENST00000590239 LOC105371242A0A075B767 164 aa12.52□□□□□ -0.41
DDX39A-211ENST00000590239 A0A096LNT2 108 aa12.52□□□□□ -0.41
DDX39A-211ENST00000590239 A0A1W2PPH5 198 aa12.52□□□□□ -0.41
DDX39A-211ENST00000590239 ZNF729A6NN14 1252 aaPredicted RBP12.52□□□□□ -0.41
DDX39A-211ENST00000590239 KIAA1324LA8MWY0 1029 aaPredicted RBP12.52□□□□□ -0.41
DDX39A-211ENST00000590239 C12orf77C9JDV5 145 aa12.52□□□□□ -0.41
DDX39A-211ENST00000590239 FABP7O15540 132 aa12.52□□□□□ -0.41
DDX39A-211ENST00000590239 PHF1O43189 567 aaPredicted RBP12.52□□□□□ -0.41
DDX39A-211ENST00000590239 SPINT2O43291 252 aa12.52□□□□□ -0.41
DDX39A-211ENST00000590239 FOXH1O75593 365 aa12.52□□□□□ -0.41
DDX39A-211ENST00000590239 DIRAS3O95661 229 aa12.52□□□□□ -0.41
DDX39A-211ENST00000590239 CD74P04233 296 aa12.52□□□□□ -0.41
DDX39A-211ENST00000590239 FCER2P06734 321 aa12.52□□□□□ -0.41
DDX39A-211ENST00000590239 CTXN2P0C2S0 81 aa12.52□□□□□ -0.41
DDX39A-211ENST00000590239 IFITM3Q01628 133 aa12.52□□□□□ -0.41
DDX39A-211ENST00000590239 LOXL1Q08397 574 aaPredicted RBP12.52□□□□□ -0.41
DDX39A-211ENST00000590239 CHRFAM7AQ494W8 412 aa12.52□□□□□ -0.41
DDX39A-211ENST00000590239 STEAP3Q658P3 488 aa12.52□□□□□ -0.41
DDX39A-211ENST00000590239 STEAP1BQ6NZ63 245 aa12.52□□□□□ -0.41
DDX39A-211ENST00000590239 TCF23Q7RTU1 214 aa12.52□□□□□ -0.41
DDX39A-211ENST00000590239 FAM185AQ8N0U4 392 aa12.52□□□□□ -0.41
DDX39A-211ENST00000590239 LY6G5BQ8NDX9 201 aa12.52□□□□□ -0.41
DDX39A-211ENST00000590239 POLR3KQ9Y2Y1 108 aaPredicted RBP12.52□□□□□ -0.41
DDX39A-211ENST00000590239 CSMD1Q96PZ7 3565 aa12.52□□□□□ -0.41
DDX39A-211ENST00000590239 MALRD1Q5VYJ5 2156 aa12.52□□□□□ -0.41
DDX39A-211ENST00000590239 KBTBD11-OT1A0A1B0GTJ5 212 aa12.51□□□□□ -0.41
DDX39A-211ENST00000590239 C15orf65H3BRN8 121 aa12.51□□□□□ -0.41
DDX39A-211ENST00000590239 CD3DP04234 171 aa12.51□□□□□ -0.41
DDX39A-211ENST00000590239 SCTP09683 121 aa12.51□□□□□ -0.41
DDX39A-211ENST00000590239 GSTT2P0CG29 244 aa12.51□□□□□ -0.41
DDX39A-211ENST00000590239 AKAIN1P0CW23 69 aa12.51□□□□□ -0.41
DDX39A-211ENST00000590239 HLA-DMAP28067 261 aa12.51□□□□□ -0.41
DDX39A-211ENST00000590239 FAUP35544 74 aaKnown RBP12.51□□□□□ -0.41
DDX39A-211ENST00000590239 OR3A3P47888 321 aa12.51□□□□□ -0.41
DDX39A-211ENST00000590239 ARPC4P59998 168 aa12.51□□□□□ -0.41
DDX39A-211ENST00000590239 MEF2DQ14814 521 aa12.51□□□□□ -0.41
DDX39A-211ENST00000590239 CDK10Q15131 360 aa12.51□□□□□ -0.41
DDX39A-211ENST00000590239 TMEM30BQ3MIR4 351 aa12.51□□□□□ -0.41
DDX39A-211ENST00000590239 RNASE10Q5GAN6 216 aaKnown RBP12.51□□□□□ -0.41
DDX39A-211ENST00000590239 VAX1Q5SQQ9 334 aa12.51□□□□□ -0.41
DDX39A-211ENST00000590239 OR5H2Q8NGV7 314 aa12.51□□□□□ -0.41
DDX39A-211ENST00000590239 ZFAND2BQ8WV99 257 aa12.51□□□□□ -0.41
DDX39A-211ENST00000590239 ARL11Q969Q4 196 aa12.51□□□□□ -0.41
DDX39A-211ENST00000590239 C1orf159Q96HA4 380 aa12.51□□□□□ -0.41
DDX39A-211ENST00000590239 COX4I2Q96KJ9 171 aa12.51□□□□□ -0.41
DDX39A-211ENST00000590239 Q96MF0 132 aa12.51□□□□□ -0.41
DDX39A-211ENST00000590239 C7orf50Q9BRJ6 194 aaKnown RBP12.51□□□□□ -0.41
DDX39A-211ENST00000590239 REG4Q9BYZ8 158 aa12.51□□□□□ -0.41
DDX39A-211ENST00000590239 GAL3ST2Q9H3Q3 398 aa12.51□□□□□ -0.41
DDX39A-211ENST00000590239 NECAP2Q9NVZ3 263 aa12.51□□□□□ -0.41
DDX39A-211ENST00000590239 CALYQ9NYX4 217 aa12.51□□□□□ -0.41
DDX39A-211ENST00000590239 PPIAL4CA0A0B4J2A2 164 aa12.5□□□□□ -0.41
DDX39A-211ENST00000590239 C22orf46C9J442 243 aa12.5□□□□□ -0.41
DDX39A-211ENST00000590239 NPIPB11E5RHQ5 1161 aa12.5□□□□□ -0.41
DDX39A-211ENST00000590239 ENSAO43768 121 aaKnown RBP12.5□□□□□ -0.41
DDX39A-211ENST00000590239 RAB3DO95716 219 aa12.5□□□□□ -0.41
DDX39A-211ENST00000590239 HBZP02008 142 aa12.5□□□□□ -0.41
DDX39A-211ENST00000590239 LIPFP07098 398 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms