RNA–Protein interactions for RNA: ENST00000589941.1

SMAD4-209, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-209ENST00000589941 OR10Z1Q8NGY1 313 aa6.35□□□□□ -1.39
SMAD4-209ENST00000589941 OR5AK2Q8NH90 309 aa6.35□□□□□ -1.39
SMAD4-209ENST00000589941 OSR1Q8TAX0 266 aaPredicted RBP6.35□□□□□ -1.39
SMAD4-209ENST00000589941 PTX4Q96A99 478 aa6.35□□□□□ -1.39
SMAD4-209ENST00000589941 MRPS24Q96EL2 167 aaKnown RBP6.35□□□□□ -1.39
SMAD4-209ENST00000589941 PHYHIPLQ96FC7 376 aa6.35□□□□□ -1.39
SMAD4-209ENST00000589941 CXorf58Q96LI9 332 aa6.35□□□□□ -1.39
SMAD4-209ENST00000589941 ZNF385AQ96PM9 386 aaKnown RBP6.35□□□□□ -1.39
SMAD4-209ENST00000589941 NMNAT3Q96T66 252 aa6.35□□□□□ -1.39
SMAD4-209ENST00000589941 SLC25A21Q9BQT8 299 aaPredicted RBP6.35□□□□□ -1.39
SMAD4-209ENST00000589941 OR11A1Q9GZK7 315 aa6.35□□□□□ -1.39
SMAD4-209ENST00000589941 CRLF2Q9HC73 371 aa6.35□□□□□ -1.39
SMAD4-209ENST00000589941 OBP2BQ9NPH6 170 aa6.35□□□□□ -1.39
SMAD4-209ENST00000589941 SLC2A8Q9NY64 477 aa6.35□□□□□ -1.39
SMAD4-209ENST00000589941 RASL12Q9NYN1 266 aa6.35□□□□□ -1.39
SMAD4-209ENST00000589941 MRPL15Q9P015 296 aaKnown RBP6.35□□□□□ -1.39
SMAD4-209ENST00000589941 KLHDC2Q9Y2U9 406 aa6.35□□□□□ -1.39
SMAD4-209ENST00000589941 ADAM18Q9Y3Q7 739 aa6.35□□□□□ -1.39
SMAD4-209ENST00000589941 TMEM14AQ9Y6G1 99 aa6.35□□□□□ -1.39
SMAD4-209ENST00000589941 TRAV8-7A0A075B6U6 113 aa6.34□□□□□ -1.39
SMAD4-209ENST00000589941 IGHV1-69-2A0A0G2JMI3 117 aa6.34□□□□□ -1.39
SMAD4-209ENST00000589941 A0A1B0GW55 424 aa6.34□□□□□ -1.39
SMAD4-209ENST00000589941 RNF222A6NCQ9 220 aa6.34□□□□□ -1.39
SMAD4-209ENST00000589941 ANXA2P2A6NMY6 339 aa6.34□□□□□ -1.39
SMAD4-209ENST00000589941 DNASE2O00115 360 aaPredicted RBP6.34□□□□□ -1.39
SMAD4-209ENST00000589941 RRHO14718 337 aa6.34□□□□□ -1.39
SMAD4-209ENST00000589941 PMS2P2O95744 297 aa6.34□□□□□ -1.39
SMAD4-209ENST00000589941 ZNF735P0CB33 412 aa6.34□□□□□ -1.39
SMAD4-209ENST00000589941 DUX4L2P0CJ85 424 aa6.34□□□□□ -1.39
SMAD4-209ENST00000589941 DUX4L3P0CJ86 424 aa6.34□□□□□ -1.39
SMAD4-209ENST00000589941 DUX4L4P0CJ87 422 aa6.34□□□□□ -1.39
SMAD4-209ENST00000589941 DUX4L5P0CJ88 424 aa6.34□□□□□ -1.39
SMAD4-209ENST00000589941 DUX4L6P0CJ89 424 aa6.34□□□□□ -1.39
SMAD4-209ENST00000589941 DUX4L7P0CJ90 424 aa6.34□□□□□ -1.39
SMAD4-209ENST00000589941 OR8G3PP0DMU2 310 aa6.34□□□□□ -1.39
SMAD4-209ENST00000589941 ZNF35P13682 527 aa6.34□□□□□ -1.39
SMAD4-209ENST00000589941 IGFBP3P17936 291 aaPredicted RBP6.34□□□□□ -1.39
SMAD4-209ENST00000589941 KIR3DL2P43630 455 aa6.34□□□□□ -1.39
SMAD4-209ENST00000589941 GMFBP60983 142 aa6.34□□□□□ -1.39
SMAD4-209ENST00000589941 UBE2NP61088 152 aaKnown RBP6.34□□□□□ -1.39
SMAD4-209ENST00000589941 ZMYND11Q15326 602 aa6.34□□□□□ -1.39
SMAD4-209ENST00000589941 SPRNQ5BIV9 151 aa6.34□□□□□ -1.39
SMAD4-209ENST00000589941 SLC25A53Q5H9E4 307 aa6.34□□□□□ -1.39
SMAD4-209ENST00000589941 TEX30Q5JUR7 227 aa6.34□□□□□ -1.39
SMAD4-209ENST00000589941 WBP2NLQ6ICG8 309 aa6.34□□□□□ -1.39
SMAD4-209ENST00000589941 UQCC3Q6UW78 93 aa6.34□□□□□ -1.39
SMAD4-209ENST00000589941 MDP1Q86V88 176 aa6.34□□□□□ -1.39
SMAD4-209ENST00000589941 MUC20Q8N307 709 aaPredicted RBP6.34□□□□□ -1.39
SMAD4-209ENST00000589941 ZIC4Q8N9L1 334 aa6.34□□□□□ -1.39
SMAD4-209ENST00000589941 OR5T2Q8NGG2 359 aa6.34□□□□□ -1.39
SMAD4-209ENST00000589941 CCDC107Q8WV48 283 aa6.34□□□□□ -1.39
SMAD4-209ENST00000589941 RASD2Q96D21 266 aa6.34□□□□□ -1.39
SMAD4-209ENST00000589941 Q96M85 177 aa6.34□□□□□ -1.39
SMAD4-209ENST00000589941 PRSS22Q9GZN4 317 aa6.34□□□□□ -1.39
SMAD4-209ENST00000589941 WDR76Q9H967 626 aa6.34□□□□□ -1.39
SMAD4-209ENST00000589941 C12orf4Q9NQ89 552 aa6.34□□□□□ -1.39
SMAD4-209ENST00000589941 DUX4Q9UBX2 424 aa6.34□□□□□ -1.39
SMAD4-209ENST00000589941 MRTO4Q9UKD2 239 aaKnown RBP6.34□□□□□ -1.39
SMAD4-209ENST00000589941 SIGLEC9Q9Y336 463 aa6.34□□□□□ -1.39
SMAD4-209ENST00000589941 RHBDD3Q9Y3P4 386 aa6.34□□□□□ -1.39
SMAD4-209ENST00000589941 DNAH10Q8IVF4 4471 aa6.33□□□□□ -1.4
SMAD4-209ENST00000589941 A0A1W2PQD3 144 aa6.33□□□□□ -1.4
SMAD4-209ENST00000589941 TMEM72A0PK05 275 aa6.33□□□□□ -1.4
SMAD4-209ENST00000589941 SRSF10O75494 262 aaKnown RBP6.33□□□□□ -1.4
SMAD4-209ENST00000589941 FOXH1O75593 365 aa6.33□□□□□ -1.4
SMAD4-209ENST00000589941 OR2F2O95006 317 aa6.33□□□□□ -1.4
SMAD4-209ENST00000589941 CSTAP01040 98 aa6.33□□□□□ -1.4
SMAD4-209ENST00000589941 CCR4P51679 360 aa6.33□□□□□ -1.4
SMAD4-209ENST00000589941 CAPZA1P52907 286 aa6.33□□□□□ -1.4
SMAD4-209ENST00000589941 CLDN12P56749 244 aa6.33□□□□□ -1.4
SMAD4-209ENST00000589941 ACTBP60709 375 aa6.33□□□□□ -1.4
SMAD4-209ENST00000589941 ERVK-25P63136 954 aa6.33□□□□□ -1.4
SMAD4-209ENST00000589941 CTAG1AP78358 180 aa6.33□□□□□ -1.4
SMAD4-209ENST00000589941 PAX2Q02962 417 aa6.33□□□□□ -1.4
SMAD4-209ENST00000589941 PAX8Q06710 450 aa6.33□□□□□ -1.4
SMAD4-209ENST00000589941 FGL1Q08830 312 aa6.33□□□□□ -1.4
SMAD4-209ENST00000589941 PLA2G7Q13093 441 aa6.33□□□□□ -1.4
SMAD4-209ENST00000589941 SKP2Q13309 424 aa6.33□□□□□ -1.4
SMAD4-209ENST00000589941 OR2F1Q13607 317 aa6.33□□□□□ -1.4
SMAD4-209ENST00000589941 PCGF3Q3KNV8 242 aa6.33□□□□□ -1.4
SMAD4-209ENST00000589941 PABPC1L2AQ5JQF8 200 aa6.33□□□□□ -1.4
SMAD4-209ENST00000589941 CLVS2Q5SYC1 327 aa6.33□□□□□ -1.4
SMAD4-209ENST00000589941 C10orf91Q5T1B1 145 aa6.33□□□□□ -1.4
SMAD4-209ENST00000589941 ACSM6Q6P461 480 aa6.33□□□□□ -1.4
SMAD4-209ENST00000589941 SERPINA12Q8IW75 414 aa6.33□□□□□ -1.4
SMAD4-209ENST00000589941 C1orf174Q8IYL3 243 aa6.33□□□□□ -1.4
SMAD4-209ENST00000589941 PRSS35Q8N3Z0 413 aa6.33□□□□□ -1.4
SMAD4-209ENST00000589941 ZSCAN4Q8NAM6 433 aaPredicted RBP6.33□□□□□ -1.4
SMAD4-209ENST00000589941 OR51L1Q8NGJ5 315 aa6.33□□□□□ -1.4
SMAD4-209ENST00000589941 OR52B4Q8NGK2 314 aa6.33□□□□□ -1.4
SMAD4-209ENST00000589941 OR5M8Q8NGP6 311 aa6.33□□□□□ -1.4
SMAD4-209ENST00000589941 ST7LQ8TDW4 575 aa6.33□□□□□ -1.4
SMAD4-209ENST00000589941 PCNPQ8WW12 178 aaKnown RBP6.33□□□□□ -1.4
SMAD4-209ENST00000589941 ASB17Q8WXJ9 295 aa6.33□□□□□ -1.4
SMAD4-209ENST00000589941 DYRK2Q92630 601 aa6.33□□□□□ -1.4
SMAD4-209ENST00000589941 OR8B4Q96RC9 309 aa6.33□□□□□ -1.4
SMAD4-209ENST00000589941 NUDT16L1Q9BRJ7 211 aaKnown RBP6.33□□□□□ -1.4
SMAD4-209ENST00000589941 GINS4Q9BRT9 223 aa6.33□□□□□ -1.4
SMAD4-209ENST00000589941 TTTY10Q9BZA0 68 aa6.33□□□□□ -1.4
SMAD4-209ENST00000589941 COMMD4Q9H0A8 199 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms