RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 CDNFQ49AH0 187 aa16.06■□□□□ 0.16
CIRBP-220ENST00000588917 GPR157Q5UAW9 335 aa16.06■□□□□ 0.16
CIRBP-220ENST00000588917 HEPN1Q6WQI6 88 aa16.06■□□□□ 0.16
CIRBP-220ENST00000588917 C1orf229Q6ZS94 237 aaPredicted RBP16.06■□□□□ 0.16
CIRBP-220ENST00000588917 C11orf42Q8N5U0 333 aa16.06■□□□□ 0.16
CIRBP-220ENST00000588917 CCDC107Q8WV48 283 aa16.06■□□□□ 0.16
CIRBP-220ENST00000588917 SLC25A38Q96DW6 304 aa16.06■□□□□ 0.16
CIRBP-220ENST00000588917 TBX15Q96SF7 602 aa16.06■□□□□ 0.16
CIRBP-220ENST00000588917 CMSS1Q9BQ75 279 aaKnown RBP16.06■□□□□ 0.16
CIRBP-220ENST00000588917 LINC00574Q9H8X3 128 aa16.06■□□□□ 0.16
CIRBP-220ENST00000588917 CHMP1AQ9HD42 196 aaPredicted RBP16.06■□□□□ 0.16
CIRBP-220ENST00000588917 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.06■□□□□ 0.161e-19■■■■□ 19.8
CIRBP-220ENST00000588917 DPPA5A6NC42 116 aa16.05■□□□□ 0.16
CIRBP-220ENST00000588917 CD3GP09693 182 aa16.05■□□□□ 0.16
CIRBP-220ENST00000588917 IGHV1-8P0DP01 117 aa16.05■□□□□ 0.16
CIRBP-220ENST00000588917 PITPNAQ00169 270 aa16.05■□□□□ 0.16
CIRBP-220ENST00000588917 TCF23Q7RTU1 214 aa16.05■□□□□ 0.16
CIRBP-220ENST00000588917 OR13A1Q8NGR1 328 aa16.05■□□□□ 0.16
CIRBP-220ENST00000588917 OR13D1Q8NGV5 346 aa16.05■□□□□ 0.16
CIRBP-220ENST00000588917 OR4K15Q8NH41 348 aa16.05■□□□□ 0.16
CIRBP-220ENST00000588917 MRGPRDQ8TDS7 321 aa16.05■□□□□ 0.16
CIRBP-220ENST00000588917 C12orf4Q9NQ89 552 aa16.05■□□□□ 0.16
CIRBP-220ENST00000588917 MBNL3Q9NUK0 354 aaKnown RBP16.05■□□□□ 0.16
CIRBP-220ENST00000588917 AK3Q9UIJ7 227 aa16.05■□□□□ 0.16
CIRBP-220ENST00000588917 NUP50Q9UKX7 468 aa16.05■□□□□ 0.16
CIRBP-220ENST00000588917 STAB1Q9NY15 2570 aa16.05■□□□□ 0.16
CIRBP-220ENST00000588917 TRBV6-6A0A0A6YYG2 114 aa16.04■□□□□ 0.16
CIRBP-220ENST00000588917 MFNGO00587 321 aa16.04■□□□□ 0.16
CIRBP-220ENST00000588917 SPINT2O43291 252 aa16.04■□□□□ 0.16
CIRBP-220ENST00000588917 XRCC3O43542 346 aa16.04■□□□□ 0.16
CIRBP-220ENST00000588917 CLPXO76031 633 aa16.04■□□□□ 0.16
CIRBP-220ENST00000588917 NAPSAO96009 420 aa16.04■□□□□ 0.16
CIRBP-220ENST00000588917 GNB3P16520 340 aa16.04■□□□□ 0.16
CIRBP-220ENST00000588917 TALDO1P37837 337 aa16.04■□□□□ 0.16
CIRBP-220ENST00000588917 ARFRP1Q13795 201 aa16.04■□□□□ 0.16
CIRBP-220ENST00000588917 PNLIPRP3Q17RR3 467 aa16.04■□□□□ 0.16
CIRBP-220ENST00000588917 TMEM30BQ3MIR4 351 aa16.04■□□□□ 0.16
CIRBP-220ENST00000588917 MOB1BQ7L9L4 216 aa16.04■□□□□ 0.16
CIRBP-220ENST00000588917 MRPL30Q8TCC3 161 aaKnown RBP16.04■□□□□ 0.16
CIRBP-220ENST00000588917 DYRK2Q92630 601 aa16.04■□□□□ 0.16
CIRBP-220ENST00000588917 LHX4Q969G2 390 aa16.04■□□□□ 0.16
CIRBP-220ENST00000588917 CALYQ9NYX4 217 aa16.04■□□□□ 0.16
CIRBP-220ENST00000588917 SESN1Q9Y6P5 492 aa16.04■□□□□ 0.16
CIRBP-220ENST00000588917 A0A075B6Q4 140 aa16.03■□□□□ 0.16
CIRBP-220ENST00000588917 TRAV18A0A075B6X5 111 aa16.03■□□□□ 0.16
CIRBP-220ENST00000588917 NPIPB11E5RHQ5 1161 aa16.03■□□□□ 0.16
CIRBP-220ENST00000588917 SRD5A1P18405 259 aa16.03■□□□□ 0.16
CIRBP-220ENST00000588917 CDK2P24941 298 aa16.03■□□□□ 0.16
CIRBP-220ENST00000588917 FPR2P25090 351 aa16.03■□□□□ 0.16
CIRBP-220ENST00000588917 MNDAP41218 407 aa16.03■□□□□ 0.16
CIRBP-220ENST00000588917 UBE2E1P51965 193 aa16.03■□□□□ 0.16
CIRBP-220ENST00000588917 ZNF260Q3ZCT1 412 aa16.03■□□□□ 0.16
CIRBP-220ENST00000588917 HACD4Q5VWC8 232 aa16.03■□□□□ 0.16
CIRBP-220ENST00000588917 ARL11Q969Q4 196 aa16.03■□□□□ 0.16
CIRBP-220ENST00000588917 BATF3Q9NR55 127 aa16.03■□□□□ 0.16
CIRBP-220ENST00000588917 SIRT7Q9NRC8 400 aa16.03■□□□□ 0.16
CIRBP-220ENST00000588917 IDI2-AS1Q9NZ38 188 aa16.03■□□□□ 0.16
CIRBP-220ENST00000588917 ADAM30Q9UKF2 790 aa16.03■□□□□ 0.16
CIRBP-220ENST00000588917 KCNK7Q9Y2U2 307 aa16.03■□□□□ 0.16
CIRBP-220ENST00000588917 MXRA5Q9NR99 2828 aa16.03■□□□□ 0.16
CIRBP-220ENST00000588917 CENPVL3A0A0U1RRI6 287 aa16.02■□□□□ 0.16
CIRBP-220ENST00000588917 MEX3AA1L020 520 aaKnown RBP16.02■□□□□ 0.16
CIRBP-220ENST00000588917 RGS5O15539 181 aa16.02■□□□□ 0.16
CIRBP-220ENST00000588917 FSHBP01225 129 aa16.02■□□□□ 0.16
CIRBP-220ENST00000588917 C17orf58Q2M2W7 97 aa16.02■□□□□ 0.16
CIRBP-220ENST00000588917 RTN4RL2Q86UN3 420 aa16.02■□□□□ 0.16
CIRBP-220ENST00000588917 OR52M1Q8NGK5 317 aa16.02■□□□□ 0.16
CIRBP-220ENST00000588917 TNFRSF14Q92956 283 aa16.02■□□□□ 0.16
CIRBP-220ENST00000588917 TMEM133Q9H2Q1 129 aa16.02■□□□□ 0.16
CIRBP-220ENST00000588917 ZMAT3Q9HA38 289 aaKnown RBP16.02■□□□□ 0.16
CIRBP-220ENST00000588917 ARHGAP32A7KAX9 2087 aa16.02■□□□□ 0.15
CIRBP-220ENST00000588917 IGHV1-69DA0A0B4J2H0 117 aa16.01■□□□□ 0.15
CIRBP-220ENST00000588917 FAM25AB3EWG3 89 aa16.01■□□□□ 0.15
CIRBP-220ENST00000588917 FAM25CB3EWG5 89 aa16.01■□□□□ 0.15
CIRBP-220ENST00000588917 FAM25GB3EWG6 89 aa16.01■□□□□ 0.15
CIRBP-220ENST00000588917 HPGDSO60760 199 aa16.01■□□□□ 0.15
CIRBP-220ENST00000588917 TPPPO94811 219 aa16.01■□□□□ 0.15
CIRBP-220ENST00000588917 IGHV1-69P01742 117 aa16.01■□□□□ 0.15
CIRBP-220ENST00000588917 MELTFP08582 738 aa16.01■□□□□ 0.15
CIRBP-220ENST00000588917 RCC1P18754 421 aaPredicted RBP16.01■□□□□ 0.15
CIRBP-220ENST00000588917 SRSF7Q16629 238 aaKnown RBP eCLIP16.01■□□□□ 0.15
CIRBP-220ENST00000588917 KLF17Q5JT82 389 aaPredicted RBP16.01■□□□□ 0.15
CIRBP-220ENST00000588917 TMEM69Q5SWH9 247 aa16.01■□□□□ 0.15
CIRBP-220ENST00000588917 ZNF880Q6PDB4 577 aa16.01■□□□□ 0.15
CIRBP-220ENST00000588917 IL17RELQ6ZVW7 336 aa16.01■□□□□ 0.15
CIRBP-220ENST00000588917 SETD6Q8TBK2 473 aa16.01■□□□□ 0.15
CIRBP-220ENST00000588917 C15orf40Q8WUR7 153 aa16.01■□□□□ 0.15
CIRBP-220ENST00000588917 SLIRPQ9GZT3 109 aaKnown RBP16.01■□□□□ 0.15
CIRBP-220ENST00000588917 MS4A7Q9GZW8 240 aaPredicted RBP16.01■□□□□ 0.15
CIRBP-220ENST00000588917 TAF9BQ9HBM6 251 aa16.01■□□□□ 0.15
CIRBP-220ENST00000588917 TRAV39A0A0B4J263 110 aa16■□□□□ 0.15
CIRBP-220ENST00000588917 TRAV40A0A0B4J280 105 aa16■□□□□ 0.15
CIRBP-220ENST00000588917 RNASEK-C17orf49H0YIS7 233 aa16■□□□□ 0.15
CIRBP-220ENST00000588917 C15orf65H3BRN8 121 aa16■□□□□ 0.15
CIRBP-220ENST00000588917 FAM157CP0CG43 387 aa16■□□□□ 0.15
CIRBP-220ENST00000588917 ELK1P19419 428 aa16■□□□□ 0.15
CIRBP-220ENST00000588917 GNG2P59768 71 aa16■□□□□ 0.15
CIRBP-220ENST00000588917 MCFD2Q8NI22 146 aa16■□□□□ 0.15
CIRBP-220ENST00000588917 RFESDQ8TAC1 157 aa16■□□□□ 0.15
CIRBP-220ENST00000588917 GALMQ96C23 342 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms