RNA–Protein interactions for RNA: ENST00000588667.5

ATG4D-208, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,619 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-208ENST00000588667 CD177Q8N6Q3 437 aa16.67■□□□□ 0.26
ATG4D-208ENST00000588667 TMPRSS13Q9BYE2 586 aa16.67■□□□□ 0.26
ATG4D-208ENST00000588667 HRASLSQ9HDD0 168 aa16.67■□□□□ 0.26
ATG4D-208ENST00000588667 IFT46Q9NQC8 304 aa16.67■□□□□ 0.26
ATG4D-208ENST00000588667 SLC25A10Q9UBX3 287 aaPredicted RBP16.67■□□□□ 0.26
ATG4D-208ENST00000588667 MAB21L2Q9Y586 359 aa16.67■□□□□ 0.26
ATG4D-208ENST00000588667 ENSAO43768 121 aaKnown RBP16.67■□□□□ 0.26
ATG4D-208ENST00000588667 FUT3P21217 361 aa16.67■□□□□ 0.26
ATG4D-208ENST00000588667 SLC6A1P30531 599 aa16.67■□□□□ 0.26
ATG4D-208ENST00000588667 CEBPDP49716 269 aaPredicted RBP16.67■□□□□ 0.26
ATG4D-208ENST00000588667 IL13RA2Q14627 380 aa16.67■□□□□ 0.26
ATG4D-208ENST00000588667 CHRFAM7AQ494W8 412 aa16.67■□□□□ 0.26
ATG4D-208ENST00000588667 OLFML2AQ68BL7 652 aa16.67■□□□□ 0.26
ATG4D-208ENST00000588667 RTN4RL2Q86UN3 420 aa16.67■□□□□ 0.26
ATG4D-208ENST00000588667 TMEM229BQ8NBD8 167 aa16.67■□□□□ 0.26
ATG4D-208ENST00000588667 ZNRF1Q8ND25 227 aa16.67■□□□□ 0.26
ATG4D-208ENST00000588667 DUSP18Q8NEJ0 188 aa16.67■□□□□ 0.26
ATG4D-208ENST00000588667 SSX5O60225 188 aa16.66■□□□□ 0.26
ATG4D-208ENST00000588667 MT-ND4P03905 459 aa16.66■□□□□ 0.26
ATG4D-208ENST00000588667 MRPS15P82914 257 aaKnown RBP16.66■□□□□ 0.26
ATG4D-208ENST00000588667 ZNF146Q15072 292 aa16.66■□□□□ 0.26
ATG4D-208ENST00000588667 SPIN3Q5JUX0 258 aa16.66■□□□□ 0.26
ATG4D-208ENST00000588667 PLET1Q6UQ28 207 aa16.66■□□□□ 0.26
ATG4D-208ENST00000588667 BTN2A1Q7KYR7 527 aa16.66■□□□□ 0.26
ATG4D-208ENST00000588667 FGFRL1Q8N441 504 aa16.66■□□□□ 0.26
ATG4D-208ENST00000588667 TMEM185AQ8NFB2 350 aa16.66■□□□□ 0.26
ATG4D-208ENST00000588667 BEX2Q9BXY8 128 aa16.66■□□□□ 0.26
ATG4D-208ENST00000588667 DPAGT1Q9H3H5 408 aa16.66■□□□□ 0.26
ATG4D-208ENST00000588667 C7orf69Q9H7B7 122 aa16.66■□□□□ 0.26
ATG4D-208ENST00000588667 SEBOXQ9HB31 216 aaPredicted RBP16.66■□□□□ 0.26
ATG4D-208ENST00000588667 SPACA1Q9HBV2 294 aa16.66■□□□□ 0.26
ATG4D-208ENST00000588667 IL36RNQ9UBH0 155 aa16.66■□□□□ 0.26
ATG4D-208ENST00000588667 hCG_2014768A0A024R1R8 64 aa16.65■□□□□ 0.26
ATG4D-208ENST00000588667 KIR2DS1A0A191URI9 304 aa16.65■□□□□ 0.26
ATG4D-208ENST00000588667 AKAIN1P0CW23 69 aa16.65■□□□□ 0.26
ATG4D-208ENST00000588667 SNU13P55769 128 aaKnown RBP16.65■□□□□ 0.26
ATG4D-208ENST00000588667 TEX29Q8N6K0 151 aa16.65■□□□□ 0.26
ATG4D-208ENST00000588667 OCSTAMPQ9BR26 566 aa16.65■□□□□ 0.26
ATG4D-208ENST00000588667 COPZ2Q9P299 210 aa16.65■□□□□ 0.26
ATG4D-208ENST00000588667 MXRA5Q9NR99 2828 aa16.64■□□□□ 0.25
ATG4D-208ENST00000588667 ZNF736B4DX44 427 aaPredicted RBP16.64■□□□□ 0.25
ATG4D-208ENST00000588667 HAND1O96004 215 aa16.64■□□□□ 0.25
ATG4D-208ENST00000588667 LIPFP07098 398 aa16.64■□□□□ 0.25
ATG4D-208ENST00000588667 BTCP35070 178 aa16.64■□□□□ 0.25
ATG4D-208ENST00000588667 PAX8Q06710 450 aa16.64■□□□□ 0.25
ATG4D-208ENST00000588667 ATAD3CQ5T2N8 411 aa16.64■□□□□ 0.25
ATG4D-208ENST00000588667 STEAP1BQ6NZ63 245 aa16.64■□□□□ 0.25
ATG4D-208ENST00000588667 IL17RELQ6ZVW7 336 aa16.64■□□□□ 0.25
ATG4D-208ENST00000588667 FAAP24Q9BTP7 215 aa16.64■□□□□ 0.25
ATG4D-208ENST00000588667 MCUBQ9NWR8 336 aa16.64■□□□□ 0.25
ATG4D-208ENST00000588667 METRNQ9UJH8 293 aa16.64■□□□□ 0.25
ATG4D-208ENST00000588667 RPUSD1Q9UJJ7 312 aaKnown RBP16.64■□□□□ 0.25
ATG4D-208ENST00000588667 AVPP01185 164 aa16.63■□□□□ 0.25
ATG4D-208ENST00000588667 NDUFB7P17568 137 aa16.63■□□□□ 0.25
ATG4D-208ENST00000588667 COL10A1Q03692 680 aa16.63■□□□□ 0.25
ATG4D-208ENST00000588667 PLA1AQ53H76 456 aa16.63■□□□□ 0.25
ATG4D-208ENST00000588667 SULT4A1Q9BR01 284 aa16.63■□□□□ 0.25
ATG4D-208ENST00000588667 DCTN5Q9BTE1 182 aa16.63■□□□□ 0.25
ATG4D-208ENST00000588667 FAM234AQ9H0X4 552 aa16.63■□□□□ 0.25
ATG4D-208ENST00000588667 RCC2Q9P258 522 aaKnown RBP16.63■□□□□ 0.25
ATG4D-208ENST00000588667 OPN4Q9UHM6 478 aa16.63■□□□□ 0.25
ATG4D-208ENST00000588667 GLS2Q9UI32 602 aa16.63■□□□□ 0.25
ATG4D-208ENST00000588667 ANAPC10Q9UM13 185 aa16.63■□□□□ 0.25
ATG4D-208ENST00000588667 AUP1Q9Y679 476 aa16.63■□□□□ 0.25
ATG4D-208ENST00000588667 DSCAML1Q8TD84 2053 aa16.63■□□□□ 0.25
ATG4D-208ENST00000588667 CD3DP04234 171 aa16.63■□□□□ 0.25
ATG4D-208ENST00000588667 FCER2P06734 321 aa16.63■□□□□ 0.25
ATG4D-208ENST00000588667 TBPP20226 339 aa16.63■□□□□ 0.25
ATG4D-208ENST00000588667 PDCD1Q15116 288 aa16.63■□□□□ 0.25
ATG4D-208ENST00000588667 C1orf229Q6ZS94 237 aaPredicted RBP16.63■□□□□ 0.25
ATG4D-208ENST00000588667 GVQW1Q8N7I0 195 aa16.63■□□□□ 0.25
ATG4D-208ENST00000588667 ASCC1Q8N9N2 400 aaKnown RBP16.63■□□□□ 0.25
ATG4D-208ENST00000588667 OR4C16Q8NGL9 310 aa16.63■□□□□ 0.25
ATG4D-208ENST00000588667 C8orf46Q8TAG6 207 aa16.63■□□□□ 0.25
ATG4D-208ENST00000588667 H1FXQ92522 213 aaKnown RBP16.63■□□□□ 0.25
ATG4D-208ENST00000588667 CMSS1Q9BQ75 279 aaKnown RBP16.63■□□□□ 0.25
ATG4D-208ENST00000588667 MMP28Q9H239 520 aa16.63■□□□□ 0.25
ATG4D-208ENST00000588667 IFT22Q9H7X7 185 aa16.63■□□□□ 0.25
ATG4D-208ENST00000588667 ZNF581Q9P0T4 197 aa16.63■□□□□ 0.25
ATG4D-208ENST00000588667 ZNF737O75373 536 aa16.62■□□□□ 0.25
ATG4D-208ENST00000588667 RAB3DO95716 219 aa16.62■□□□□ 0.25
ATG4D-208ENST00000588667 CD74P04233 296 aa16.62■□□□□ 0.25
ATG4D-208ENST00000588667 HLA-DMAP28067 261 aa16.62■□□□□ 0.25
ATG4D-208ENST00000588667 DUSP1P28562 367 aa16.62■□□□□ 0.25
ATG4D-208ENST00000588667 LY6G5BQ8NDX9 201 aa16.62■□□□□ 0.25
ATG4D-208ENST00000588667 CREB3L1Q96BA8 519 aa16.62■□□□□ 0.25
ATG4D-208ENST00000588667 DMRTB1Q96MA1 342 aa16.62■□□□□ 0.25
ATG4D-208ENST00000588667 AK3Q9UIJ7 227 aa16.62■□□□□ 0.25
ATG4D-208ENST00000588667 TRBV23-1A0A0A0MS06 115 aa16.61■□□□□ 0.25
ATG4D-208ENST00000588667 K7N7A8 449 aa16.61■□□□□ 0.25
ATG4D-208ENST00000588667 SH2D1BO14796 132 aa16.61■□□□□ 0.25
ATG4D-208ENST00000588667 TK1P04183 234 aa16.61■□□□□ 0.25
ATG4D-208ENST00000588667 GLAP06280 429 aa16.61■□□□□ 0.25
ATG4D-208ENST00000588667 FAM157CP0CG43 387 aa16.61■□□□□ 0.25
ATG4D-208ENST00000588667 PPIAL4GP0DN37 164 aa16.61■□□□□ 0.25
ATG4D-208ENST00000588667 SRD5A1P18405 259 aa16.61■□□□□ 0.25
ATG4D-208ENST00000588667 NAT1P18440 290 aa16.61■□□□□ 0.25
ATG4D-208ENST00000588667 SRP14P37108 136 aaKnown RBP16.61■□□□□ 0.25
ATG4D-208ENST00000588667 MEF2DQ14814 521 aa16.61■□□□□ 0.25
ATG4D-208ENST00000588667 HOGA1Q86XE5 327 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms