RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 CYB5R3P00387 301 aaPredicted RBP10.54□□□□□ -0.72
VMP1-202ENST00000585847 H2AFB2P0C5Z0 115 aa10.54□□□□□ -0.72
VMP1-202ENST00000585847 PTHLHP12272 177 aa10.54□□□□□ -0.72
VMP1-202ENST00000585847 EGR1P18146 543 aa10.54□□□□□ -0.72
VMP1-202ENST00000585847 HLA-DMAP28067 261 aa10.54□□□□□ -0.72
VMP1-202ENST00000585847 PDLIM4P50479 330 aa10.54□□□□□ -0.72
VMP1-202ENST00000585847 RAB25P57735 213 aa10.54□□□□□ -0.72
VMP1-202ENST00000585847 TSPAN5P62079 268 aa10.54□□□□□ -0.72
VMP1-202ENST00000585847 CLEC12BQ2HXU8 276 aa10.54□□□□□ -0.72
VMP1-202ENST00000585847 LPCAT3Q6P1A2 487 aa10.54□□□□□ -0.72
VMP1-202ENST00000585847 SLC36A1Q7Z2H8 476 aa10.54□□□□□ -0.72
VMP1-202ENST00000585847 OR51S1Q8NGJ8 323 aa10.54□□□□□ -0.72
VMP1-202ENST00000585847 ANGPTL6Q8NI99 470 aa10.54□□□□□ -0.72
VMP1-202ENST00000585847 ASB13Q8WXK3 278 aa10.54□□□□□ -0.72
VMP1-202ENST00000585847 CCL17Q92583 94 aa10.54□□□□□ -0.72
VMP1-202ENST00000585847 UPRTQ96BW1 309 aa10.54□□□□□ -0.72
VMP1-202ENST00000585847 GINS4Q9BRT9 223 aa10.54□□□□□ -0.72
VMP1-202ENST00000585847 ST6GALNAC5Q9BVH7 336 aa10.54□□□□□ -0.72
VMP1-202ENST00000585847 ZNF665Q9H7R5 613 aa10.54□□□□□ -0.72
VMP1-202ENST00000585847 CHODLQ9H9P2 273 aa10.54□□□□□ -0.72
VMP1-202ENST00000585847 ZNF222Q9UK12 451 aa10.54□□□□□ -0.72
VMP1-202ENST00000585847 FBN3Q75N90 2809 aa10.53□□□□□ -0.72
VMP1-202ENST00000585847 UBE2QL1A1L167 161 aa10.53□□□□□ -0.72
VMP1-202ENST00000585847 RFPL4AA6NLU0 287 aa10.53□□□□□ -0.72
VMP1-202ENST00000585847 RFPL4AL1F8VTS6 287 aa10.53□□□□□ -0.72
VMP1-202ENST00000585847 TMEM178BH3BS89 294 aa10.53□□□□□ -0.72
VMP1-202ENST00000585847 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.53□□□□□ -0.72
VMP1-202ENST00000585847 WNT9BO14905 357 aa10.53□□□□□ -0.72
VMP1-202ENST00000585847 FABP7O15540 132 aa10.53□□□□□ -0.72
VMP1-202ENST00000585847 ZNF737O75373 536 aa10.53□□□□□ -0.72
VMP1-202ENST00000585847 PSG2P11465 335 aa10.53□□□□□ -0.72
VMP1-202ENST00000585847 FPR2P25090 351 aa10.53□□□□□ -0.72
VMP1-202ENST00000585847 BCAP31P51572 246 aa10.53□□□□□ -0.72
VMP1-202ENST00000585847 IL13RA1P78552 427 aa10.53□□□□□ -0.72
VMP1-202ENST00000585847 HLA-DRB3P79483 266 aa10.53□□□□□ -0.72
VMP1-202ENST00000585847 MSMO1Q15800 293 aa10.53□□□□□ -0.72
VMP1-202ENST00000585847 DHRS11Q6UWP2 260 aa10.53□□□□□ -0.72
VMP1-202ENST00000585847 CLEC9AQ6UXN8 241 aa10.53□□□□□ -0.72
VMP1-202ENST00000585847 LHFPL1Q86WI0 220 aa10.53□□□□□ -0.72
VMP1-202ENST00000585847 GIMAP1Q8WWP7 306 aa10.53□□□□□ -0.72
VMP1-202ENST00000585847 TIMD4Q96H15 378 aa10.53□□□□□ -0.72
VMP1-202ENST00000585847 ZNF486Q96H40 463 aaPredicted RBP10.53□□□□□ -0.72
VMP1-202ENST00000585847 Q96MF0 132 aa10.53□□□□□ -0.72
VMP1-202ENST00000585847 SMR3AQ99954 134 aa10.53□□□□□ -0.72
VMP1-202ENST00000585847 CABLES2Q9BTV7 478 aa10.53□□□□□ -0.72
VMP1-202ENST00000585847 EHFQ9NZC4 300 aa10.53□□□□□ -0.72
VMP1-202ENST00000585847 OR6C3Q9NZP0 311 aa10.53□□□□□ -0.72
VMP1-202ENST00000585847 KAAG1Q9UBP8 84 aa10.53□□□□□ -0.72
VMP1-202ENST00000585847 PPIAL4EA0A075B759 164 aa10.52□□□□□ -0.73
VMP1-202ENST00000585847 PPIAL4DF5H284 164 aa10.52□□□□□ -0.73
VMP1-202ENST00000585847 K7N7A8 449 aa10.52□□□□□ -0.73
VMP1-202ENST00000585847 SIRPB1O00241 398 aa10.52□□□□□ -0.73
VMP1-202ENST00000585847 SIGLEC5O15389 551 aa10.52□□□□□ -0.73
VMP1-202ENST00000585847 ZNF205O95201 554 aa10.52□□□□□ -0.73
VMP1-202ENST00000585847 IGHV2-70P01814 119 aa10.52□□□□□ -0.73
VMP1-202ENST00000585847 ZNF735P0CB33 412 aa10.52□□□□□ -0.73
VMP1-202ENST00000585847 PPIAL4FP0DN26 164 aa10.52□□□□□ -0.73
VMP1-202ENST00000585847 OR5H8P0DN80 308 aa10.52□□□□□ -0.73
VMP1-202ENST00000585847 GZMHP20718 246 aa10.52□□□□□ -0.73
VMP1-202ENST00000585847 UCP3P55916 312 aa10.52□□□□□ -0.73
VMP1-202ENST00000585847 TATDN3Q17R31 274 aa10.52□□□□□ -0.73
VMP1-202ENST00000585847 ZNF788Q6ZQV5 615 aa10.52□□□□□ -0.73
VMP1-202ENST00000585847 FAM185AQ8N0U4 392 aa10.52□□□□□ -0.73
VMP1-202ENST00000585847 GVQW1Q8N7I0 195 aa10.52□□□□□ -0.73
VMP1-202ENST00000585847 ZNF565Q8N9K5 539 aa10.52□□□□□ -0.73
VMP1-202ENST00000585847 MRPL30Q8TCC3 161 aaKnown RBP10.52□□□□□ -0.73
VMP1-202ENST00000585847 ZFAND1Q8TCF1 268 aa10.52□□□□□ -0.73
VMP1-202ENST00000585847 FAM168AQ92567 244 aa10.52□□□□□ -0.73
VMP1-202ENST00000585847 BPESC1Q9GZL8 116 aa10.52□□□□□ -0.73
VMP1-202ENST00000585847 TINAGL1Q9GZM7 467 aaPredicted RBP10.52□□□□□ -0.73
VMP1-202ENST00000585847 IL36RNQ9UBH0 155 aa10.52□□□□□ -0.73
VMP1-202ENST00000585847 OR14J1Q9UGF5 321 aa10.52□□□□□ -0.73
VMP1-202ENST00000585847 PPIAL4AQ9Y536 164 aa10.52□□□□□ -0.73
VMP1-202ENST00000585847 NSD1Q96L73 2696 aaPredicted RBP10.52□□□□□ -0.73
VMP1-202ENST00000585847 IGKV1D-17A0A075B6S4 117 aa10.51□□□□□ -0.73
VMP1-202ENST00000585847 TMEM82A0PJX8 343 aa10.51□□□□□ -0.73
VMP1-202ENST00000585847 MEIS3P1A6NDR6 274 aa10.51□□□□□ -0.73
VMP1-202ENST00000585847 TNFRSF13BO14836 293 aaPredicted RBP10.51□□□□□ -0.73
VMP1-202ENST00000585847 CREBL2O60519 120 aaPredicted RBP10.51□□□□□ -0.73
VMP1-202ENST00000585847 PFDN1O60925 122 aa10.51□□□□□ -0.73
VMP1-202ENST00000585847 B3GALNT1O75752 331 aa10.51□□□□□ -0.73
VMP1-202ENST00000585847 DUSP1P28562 367 aa10.51□□□□□ -0.73
VMP1-202ENST00000585847 S100GP29377 79 aa10.51□□□□□ -0.73
VMP1-202ENST00000585847 CD80P33681 288 aa10.51□□□□□ -0.73
VMP1-202ENST00000585847 OR3A1P47881 315 aa10.51□□□□□ -0.73
VMP1-202ENST00000585847 CCR6P51684 374 aa10.51□□□□□ -0.73
VMP1-202ENST00000585847 P2RX3P56373 397 aa10.51□□□□□ -0.73
VMP1-202ENST00000585847 TMEM33P57088 247 aa10.51□□□□□ -0.73
VMP1-202ENST00000585847 COL10A1Q03692 680 aa10.51□□□□□ -0.73
VMP1-202ENST00000585847 MEF2CQ06413 473 aaPredicted RBP10.51□□□□□ -0.73
VMP1-202ENST00000585847 HMGN3Q15651 99 aa10.51□□□□□ -0.73
VMP1-202ENST00000585847 CARTPTQ16568 116 aa10.51□□□□□ -0.73
VMP1-202ENST00000585847 CR1LQ2VPA4 569 aa10.51□□□□□ -0.73
VMP1-202ENST00000585847 TMEM155Q4W5P6 130 aa10.51□□□□□ -0.73
VMP1-202ENST00000585847 AVPI1Q5T686 147 aa10.51□□□□□ -0.73
VMP1-202ENST00000585847 OR52W1Q6IF63 320 aa10.51□□□□□ -0.73
VMP1-202ENST00000585847 CLEC2AQ6UVW9 174 aa10.51□□□□□ -0.73
VMP1-202ENST00000585847 CIARTQ8N365 385 aaPredicted RBP10.51□□□□□ -0.73
VMP1-202ENST00000585847 ASCC1Q8N9N2 400 aaKnown RBP10.51□□□□□ -0.73
VMP1-202ENST00000585847 OR4S1Q8NGB4 309 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms