RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772	SGTB	Q96EQ0	304 aa		3.61	□□□□□ -1.83
MSI2-216	ENST00000582772	PELI1	Q96FA3	418 aa		3.61	□□□□□ -1.83
MSI2-216	ENST00000582772	ERMAP	Q96PL5	475 aa	Predicted RBP	3.61	□□□□□ -1.83
MSI2-216	ENST00000582772	ABHD1	Q96SE0	405 aa		3.61	□□□□□ -1.83
MSI2-216	ENST00000582772	TEX12	Q9BXU0	123 aa		3.61	□□□□□ -1.83
MSI2-216	ENST00000582772	NMNAT2	Q9BZQ4	307 aa		3.61	□□□□□ -1.83
MSI2-216	ENST00000582772	ZCCHC4	Q9H5U6	513 aa		3.61	□□□□□ -1.83
MSI2-216	ENST00000582772	GNB4	Q9HAV0	340 aa		3.61	□□□□□ -1.83
MSI2-216	ENST00000582772	CACYBP	Q9HB71	228 aa	Known RBP	3.61	□□□□□ -1.83
MSI2-216	ENST00000582772	SRA1	Q9HD15	236 aa	Known RBP	3.61	□□□□□ -1.83
MSI2-216	ENST00000582772	KRCC1	Q9NPI7	259 aa	Predicted RBP	3.61	□□□□□ -1.83
MSI2-216	ENST00000582772	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	3.61	□□□□□ -1.83
MSI2-216	ENST00000582772	RBFOX1	Q9NWB1	397 aa	Known RBP	3.61	□□□□□ -1.83
MSI2-216	ENST00000582772	HAO2	Q9NYQ3	351 aa		3.61	□□□□□ -1.83
MSI2-216	ENST00000582772	RNF7	Q9UBF6	113 aa		3.61	□□□□□ -1.83
MSI2-216	ENST00000582772	EXTL2	Q9UBQ6	330 aa		3.61	□□□□□ -1.83
MSI2-216	ENST00000582772	BAIAP2	Q9UQB8	552 aa		3.61	□□□□□ -1.83
MSI2-216	ENST00000582772	KLHDC2	Q9Y2U9	406 aa		3.61	□□□□□ -1.83
MSI2-216	ENST00000582772	ADAM18	Q9Y3Q7	739 aa		3.61	□□□□□ -1.83
MSI2-216	ENST00000582772	WSB1	Q9Y6I7	421 aa		3.61	□□□□□ -1.83
MSI2-216	ENST00000582772	LOC100509620	A0A075B734	347 aa		3.6	□□□□□ -1.83
MSI2-216	ENST00000582772		A0A087WUJ7	227 aa		3.6	□□□□□ -1.83
MSI2-216	ENST00000582772	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	3.6	□□□□□ -1.83
MSI2-216	ENST00000582772	TRAV1-2	A0A0B4J238	106 aa		3.6	□□□□□ -1.83
MSI2-216	ENST00000582772	TRAV10	A0A0B4J240	114 aa		3.6	□□□□□ -1.83
MSI2-216	ENST00000582772	NBDY	A0A0U1RRE5	68 aa		3.6	□□□□□ -1.83
MSI2-216	ENST00000582772	LOC102725191	A0A1B0GVB3	256 aa		3.6	□□□□□ -1.83
MSI2-216	ENST00000582772	ANKRD34B	A5PLL1	514 aa		3.6	□□□□□ -1.83
MSI2-216	ENST00000582772	FAM172BP	A6NC97	362 aa		3.6	□□□□□ -1.83
MSI2-216	ENST00000582772	OR11H12	B2RN74	326 aa		3.6	□□□□□ -1.83
MSI2-216	ENST00000582772	INMT-MINDY4	F8WBC2	141 aa		3.6	□□□□□ -1.83
MSI2-216	ENST00000582772	LINC01619	G3V211	115 aa		3.6	□□□□□ -1.83
MSI2-216	ENST00000582772	ARPC1B	O15143	372 aa	Known RBP	3.6	□□□□□ -1.83
MSI2-216	ENST00000582772	AKR7A2	O43488	359 aa		3.6	□□□□□ -1.83
MSI2-216	ENST00000582772	NDUFB2	O95178	105 aa		3.6	□□□□□ -1.83
MSI2-216	ENST00000582772	IFNA21	P01568	189 aa		3.6	□□□□□ -1.83
MSI2-216	ENST00000582772	IFNA17	P01571	189 aa		3.6	□□□□□ -1.83
MSI2-216	ENST00000582772	UCHL1	P09936	223 aa		3.6	□□□□□ -1.83
MSI2-216	ENST00000582772	DUX4L4	P0CJ87	422 aa		3.6	□□□□□ -1.83
MSI2-216	ENST00000582772	ZNF3	P17036	446 aa		3.6	□□□□□ -1.83
MSI2-216	ENST00000582772	ZNF43	P17038	809 aa		3.6	□□□□□ -1.83
MSI2-216	ENST00000582772	SPI1	P17947	270 aa		3.6	□□□□□ -1.83
MSI2-216	ENST00000582772	AQP2	P41181	271 aa		3.6	□□□□□ -1.83
MSI2-216	ENST00000582772	CD200	P41217	278 aa		3.6	□□□□□ -1.83
MSI2-216	ENST00000582772	CDKN2A	P42771	156 aa	Known RBP	3.6	□□□□□ -1.83
MSI2-216	ENST00000582772	GDI2	P50395	445 aa	Known RBP	3.6	□□□□□ -1.83
MSI2-216	ENST00000582772	SLURP1	P55000	103 aa		3.6	□□□□□ -1.83
MSI2-216	ENST00000582772	NANOS3	P60323	173 aa	Known RBP	3.6	□□□□□ -1.83
MSI2-216	ENST00000582772	ERVK-25	P63136	954 aa		3.6	□□□□□ -1.83
MSI2-216	ENST00000582772	HOXA4	Q00056	320 aa	Predicted RBP	3.6	□□□□□ -1.83
MSI2-216	ENST00000582772	HSF2	Q03933	536 aa		3.6	□□□□□ -1.83
MSI2-216	ENST00000582772	CDK5R1	Q15078	307 aa		3.6	□□□□□ -1.83
MSI2-216	ENST00000582772	FCN2	Q15485	313 aa		3.6	□□□□□ -1.83
MSI2-216	ENST00000582772	OR8B8	Q15620	311 aa		3.6	□□□□□ -1.83
MSI2-216	ENST00000582772	OR7A5	Q15622	319 aa		3.6	□□□□□ -1.83
MSI2-216	ENST00000582772	RNASE12	Q5GAN4	147 aa	Known RBP	3.6	□□□□□ -1.83
MSI2-216	ENST00000582772	ALG10B	Q5I7T1	473 aa		3.6	□□□□□ -1.83
MSI2-216	ENST00000582772	C9orf152	Q5JTZ5	239 aa		3.6	□□□□□ -1.83
MSI2-216	ENST00000582772	CCDC144NL	Q6NUI1	221 aa		3.6	□□□□□ -1.83
MSI2-216	ENST00000582772	PRSS45	Q7RTY3	260 aa		3.6	□□□□□ -1.83
MSI2-216	ENST00000582772	SLC36A1	Q7Z2H8	476 aa		3.6	□□□□□ -1.83
MSI2-216	ENST00000582772	FAM122B	Q7Z309	247 aa		3.6	□□□□□ -1.83
MSI2-216	ENST00000582772	NOXA1	Q86UR1	476 aa		3.6	□□□□□ -1.83
MSI2-216	ENST00000582772	CATSPERD	Q86XM0	798 aa		3.6	□□□□□ -1.83
MSI2-216	ENST00000582772	IZUMO1	Q8IYV9	350 aa		3.6	□□□□□ -1.83
MSI2-216	ENST00000582772	TCTE3	Q8IZS6	198 aa		3.6	□□□□□ -1.83
MSI2-216	ENST00000582772	SAMD12	Q8N8I0	201 aa		3.6	□□□□□ -1.83
MSI2-216	ENST00000582772	OR2K2	Q8NGT1	345 aa		3.6	□□□□□ -1.83
MSI2-216	ENST00000582772	TRMT10A	Q8TBZ6	339 aa	Known RBP	3.6	□□□□□ -1.83
MSI2-216	ENST00000582772	ENKUR	Q8TC29	256 aa		3.6	□□□□□ -1.83
MSI2-216	ENST00000582772	ACOT12	Q8WYK0	555 aa		3.6	□□□□□ -1.83
MSI2-216	ENST00000582772	GHSR	Q92847	366 aa		3.6	□□□□□ -1.83
MSI2-216	ENST00000582772	HAVCR1	Q96D42	359 aa		3.6	□□□□□ -1.83
MSI2-216	ENST00000582772	SLC25A38	Q96DW6	304 aa		3.6	□□□□□ -1.83
MSI2-216	ENST00000582772		Q96M85	177 aa		3.6	□□□□□ -1.83
MSI2-216	ENST00000582772	MOGAT1	Q96PD6	335 aa		3.6	□□□□□ -1.83
MSI2-216	ENST00000582772	NMNAT3	Q96T66	252 aa		3.6	□□□□□ -1.83
MSI2-216	ENST00000582772	MARVELD1	Q9BSK0	173 aa		3.6	□□□□□ -1.83
MSI2-216	ENST00000582772	HDHD2	Q9H0R4	259 aa		3.6	□□□□□ -1.83
MSI2-216	ENST00000582772	EVA1A	Q9H8M9	152 aa		3.6	□□□□□ -1.83
MSI2-216	ENST00000582772	ELOVL3	Q9HB03	270 aa		3.6	□□□□□ -1.83
MSI2-216	ENST00000582772	NRIP3	Q9NQ35	241 aa		3.6	□□□□□ -1.83
MSI2-216	ENST00000582772	MOB4	Q9Y3A3	225 aa		3.6	□□□□□ -1.83
MSI2-216	ENST00000582772	TMED7-TICAM2	A0A0A6YYA0	188 aa		3.59	□□□□□ -1.83
MSI2-216	ENST00000582772	TEX13C	A0A0J9YWL9	993 aa		3.59	□□□□□ -1.83
MSI2-216	ENST00000582772	FAM240B	A0A1B0GVZ2	78 aa		3.59	□□□□□ -1.83
MSI2-216	ENST00000582772	TMEM72	A0PK05	275 aa		3.59	□□□□□ -1.83
MSI2-216	ENST00000582772	C7orf66	A4D0T2	115 aa		3.59	□□□□□ -1.83
MSI2-216	ENST00000582772	C5orf49	A4QMS7	147 aa		3.59	□□□□□ -1.83
MSI2-216	ENST00000582772	ACOD1	A6NK06	481 aa		3.59	□□□□□ -1.83
MSI2-216	ENST00000582772	CENPX	A8MT69	81 aa		3.59	□□□□□ -1.83
MSI2-216	ENST00000582772	NOTO	A8MTQ0	251 aa		3.59	□□□□□ -1.83
MSI2-216	ENST00000582772		F5H5P2	479 aa		3.59	□□□□□ -1.83
MSI2-216	ENST00000582772		H7C1C5	153 aa		3.59	□□□□□ -1.83
MSI2-216	ENST00000582772	PSMD9	O00233	223 aa		3.59	□□□□□ -1.83
MSI2-216	ENST00000582772	DCTN6	O00399	190 aa		3.59	□□□□□ -1.83
MSI2-216	ENST00000582772	UBE2C	O00762	179 aa		3.59	□□□□□ -1.83
MSI2-216	ENST00000582772	ARPC3	O15145	178 aa		3.59	□□□□□ -1.83
MSI2-216	ENST00000582772	NDUFB3	O43676	98 aa		3.59	□□□□□ -1.83
MSI2-216	ENST00000582772	GSTZ1	O43708	216 aa	Predicted RBP	3.59	□□□□□ -1.83

Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms