RNA–Protein interactions for RNA: ENST00000581180.1

MKS1-210, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 899 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-210ENST00000581180 RIMS4Q9H426 269 aaPredicted RBP12.36□□□□□ -0.43
MKS1-210ENST00000581180 ZMAT3Q9HA38 289 aaKnown RBP12.36□□□□□ -0.43
MKS1-210ENST00000581180 CALYQ9NYX4 217 aa12.36□□□□□ -0.43
MKS1-210ENST00000581180 A0A075B6Q4 140 aa12.35□□□□□ -0.43
MKS1-210ENST00000581180 CENPVL3A0A0U1RRI6 287 aa12.35□□□□□ -0.43
MKS1-210ENST00000581180 hCG_1809904A0A1W2PP81 198 aa12.35□□□□□ -0.43
MKS1-210ENST00000581180 A0A1W2PPE2 198 aa12.35□□□□□ -0.43
MKS1-210ENST00000581180 A0A1W2PR64 198 aa12.35□□□□□ -0.43
MKS1-210ENST00000581180 A0A1W2PRV1 198 aa12.35□□□□□ -0.43
MKS1-210ENST00000581180 RNASEK-C17orf49H0YIS7 233 aa12.35□□□□□ -0.43
MKS1-210ENST00000581180 XRCC3O43542 346 aa12.35□□□□□ -0.43
MKS1-210ENST00000581180 ORC5O43913 435 aa12.35□□□□□ -0.43
MKS1-210ENST00000581180 HPGDSO60760 199 aa12.35□□□□□ -0.43
MKS1-210ENST00000581180 CLPXO76031 633 aa12.35□□□□□ -0.43
MKS1-210ENST00000581180 GSTP1P09211 210 aaKnown RBP12.35□□□□□ -0.43
MKS1-210ENST00000581180 IGHV1-8P0DP01 117 aa12.35□□□□□ -0.43
MKS1-210ENST00000581180 IGHV4-38-2P0DP08 117 aa12.35□□□□□ -0.43
MKS1-210ENST00000581180 HOXB4P17483 251 aaPredicted RBP12.35□□□□□ -0.43
MKS1-210ENST00000581180 RCC1P18754 421 aaPredicted RBP12.35□□□□□ -0.43
MKS1-210ENST00000581180 GZMHP20718 246 aa12.35□□□□□ -0.43
MKS1-210ENST00000581180 CDK2P24941 298 aa12.35□□□□□ -0.43
MKS1-210ENST00000581180 GDNFP39905 211 aa12.35□□□□□ -0.43
MKS1-210ENST00000581180 PRB3Q04118 309 aaPredicted RBP12.35□□□□□ -0.43
MKS1-210ENST00000581180 ARL6IP1Q15041 203 aa12.35□□□□□ -0.43
MKS1-210ENST00000581180 CDNFQ49AH0 187 aa12.35□□□□□ -0.43
MKS1-210ENST00000581180 TEX29Q8N6K0 151 aa12.35□□□□□ -0.43
MKS1-210ENST00000581180 NANPQ8TBE9 248 aa12.35□□□□□ -0.43
MKS1-210ENST00000581180 S100A16Q96FQ6 103 aaKnown RBP12.35□□□□□ -0.43
MKS1-210ENST00000581180 CMSS1Q9BQ75 279 aaKnown RBP12.35□□□□□ -0.43
MKS1-210ENST00000581180 DIABLOQ9NR28 239 aa12.35□□□□□ -0.43
MKS1-210ENST00000581180 CDC42EP3Q9UKI2 254 aa12.35□□□□□ -0.43
MKS1-210ENST00000581180 ELF5Q9UKW6 265 aaPredicted RBP12.35□□□□□ -0.43
MKS1-210ENST00000581180 TRAPPC2LQ9UL33 140 aa12.35□□□□□ -0.43
MKS1-210ENST00000581180 MXRA5Q9NR99 2828 aa12.34□□□□□ -0.43
MKS1-210ENST00000581180 ZFHX3Q15911 3703 aa12.34□□□□□ -0.43
MKS1-210ENST00000581180 TRAV18A0A075B6X5 111 aa12.34□□□□□ -0.43
MKS1-210ENST00000581180 TRAV40A0A0B4J280 105 aa12.34□□□□□ -0.43
MKS1-210ENST00000581180 POM121CA8CG34 1229 aa12.34□□□□□ -0.43
MKS1-210ENST00000581180 C12orf77C9JDV5 145 aa12.34□□□□□ -0.43
MKS1-210ENST00000581180 CTDSP2O14595 271 aa12.34□□□□□ -0.43
MKS1-210ENST00000581180 CRLF1O75462 422 aa12.34□□□□□ -0.43
MKS1-210ENST00000581180 ELK1P19419 428 aa12.34□□□□□ -0.43
MKS1-210ENST00000581180 HNF1AP20823 631 aa12.34□□□□□ -0.43
MKS1-210ENST00000581180 SSTR5P35346 364 aa12.34□□□□□ -0.43
MKS1-210ENST00000581180 KLRD1Q13241 179 aa12.34□□□□□ -0.43
MKS1-210ENST00000581180 PRAMEF5Q5TYX0 476 aa12.34□□□□□ -0.43
MKS1-210ENST00000581180 ZNF782Q6ZMW2 699 aaPredicted RBP12.34□□□□□ -0.43
MKS1-210ENST00000581180 ZNF554Q86TJ5 538 aa12.34□□□□□ -0.43
MKS1-210ENST00000581180 LHX4Q969G2 390 aa12.34□□□□□ -0.43
MKS1-210ENST00000581180 PHF21AQ96BD5 680 aa12.34□□□□□ -0.43
MKS1-210ENST00000581180 MIXL1Q9H2W2 232 aa12.34□□□□□ -0.43
MKS1-210ENST00000581180 C12orf4Q9NQ89 552 aa12.34□□□□□ -0.43
MKS1-210ENST00000581180 SESN1Q9Y6P5 492 aa12.34□□□□□ -0.43
MKS1-210ENST00000581180 TMEM235A6NFC5 223 aa12.33□□□□□ -0.44
MKS1-210ENST00000581180 MELTFP08582 738 aa12.33□□□□□ -0.44
MKS1-210ENST00000581180 CD3GP09693 182 aa12.33□□□□□ -0.44
MKS1-210ENST00000581180 OMGP23515 440 aa12.33□□□□□ -0.44
MKS1-210ENST00000581180 HMGN3Q15651 99 aa12.33□□□□□ -0.44
MKS1-210ENST00000581180 PNLIPRP3Q17RR3 467 aa12.33□□□□□ -0.44
MKS1-210ENST00000581180 CHRFAM7AQ494W8 412 aa12.33□□□□□ -0.44
MKS1-210ENST00000581180 C6orf183Q5T699 404 aa12.33□□□□□ -0.44
MKS1-210ENST00000581180 HACD4Q5VWC8 232 aa12.33□□□□□ -0.44
MKS1-210ENST00000581180 NCR3LG1Q68D85 454 aa12.33□□□□□ -0.44
MKS1-210ENST00000581180 TRAT1Q6PIZ9 186 aa12.33□□□□□ -0.44
MKS1-210ENST00000581180 BAIAP2L2Q6UXY1 529 aa12.33□□□□□ -0.44
MKS1-210ENST00000581180 MOB1BQ7L9L4 216 aa12.33□□□□□ -0.44
MKS1-210ENST00000581180 C5orf24Q7Z6I8 188 aa12.33□□□□□ -0.44
MKS1-210ENST00000581180 IZUMO1Q8IYV9 350 aa12.33□□□□□ -0.44
MKS1-210ENST00000581180 DTX3Q8N9I9 347 aa12.33□□□□□ -0.44
MKS1-210ENST00000581180 OR10A7Q8NGE5 316 aa12.33□□□□□ -0.44
MKS1-210ENST00000581180 RFESDQ8TAC1 157 aa12.33□□□□□ -0.44
MKS1-210ENST00000581180 ARL11Q969Q4 196 aa12.33□□□□□ -0.44
MKS1-210ENST00000581180 KIRREL1Q96J84 757 aa12.33□□□□□ -0.44
MKS1-210ENST00000581180 DCUN1D5Q9BTE7 237 aa12.33□□□□□ -0.44
MKS1-210ENST00000581180 BEX2Q9BXY8 128 aa12.33□□□□□ -0.44
MKS1-210ENST00000581180 AUNIPQ9H7T9 357 aa12.33□□□□□ -0.44
MKS1-210ENST00000581180 TAF9BQ9HBM6 251 aa12.33□□□□□ -0.44
MKS1-210ENST00000581180 Q9N2K0 584 aa12.33□□□□□ -0.44
MKS1-210ENST00000581180 IDI2-AS1Q9NZ38 188 aa12.33□□□□□ -0.44
MKS1-210ENST00000581180 NUP50Q9UKX7 468 aa12.33□□□□□ -0.44
MKS1-210ENST00000581180 IGHV3OR16-10A0A075B7F0 116 aa12.32□□□□□ -0.44
MKS1-210ENST00000581180 A0A087X0M5 115 aa12.32□□□□□ -0.44
MKS1-210ENST00000581180 A0A1B0GX30 115 aa12.32□□□□□ -0.44
MKS1-210ENST00000581180 F2RL2O00254 374 aa12.32□□□□□ -0.44
MKS1-210ENST00000581180 FCGR3AP08637 254 aa12.32□□□□□ -0.44
MKS1-210ENST00000581180 SRP14P37108 136 aaKnown RBP12.32□□□□□ -0.44
MKS1-210ENST00000581180 UBE2E1P51965 193 aa12.32□□□□□ -0.44
MKS1-210ENST00000581180 TAS2R20P59543 309 aa12.32□□□□□ -0.44
MKS1-210ENST00000581180 ARFRP1Q13795 201 aa12.32□□□□□ -0.44
MKS1-210ENST00000581180 TUSC1Q2TAM9 212 aa12.32□□□□□ -0.44
MKS1-210ENST00000581180 UTF1Q5T230 341 aa12.32□□□□□ -0.44
MKS1-210ENST00000581180 GPR157Q5UAW9 335 aa12.32□□□□□ -0.44
MKS1-210ENST00000581180 OR1L1Q8NH94 360 aa12.32□□□□□ -0.44
MKS1-210ENST00000581180 UBALD1Q8TB05 177 aa12.32□□□□□ -0.44
MKS1-210ENST00000581180 TMEM133Q9H2Q1 129 aa12.32□□□□□ -0.44
MKS1-210ENST00000581180 HEXA-AS1Q9H8Q6 139 aa12.32□□□□□ -0.44
MKS1-210ENST00000581180 CHMP1AQ9HD42 196 aaPredicted RBP12.32□□□□□ -0.44
MKS1-210ENST00000581180 IGHV1-69DA0A0B4J2H0 117 aa12.31□□□□□ -0.44
MKS1-210ENST00000581180 SSX5O60225 188 aa12.31□□□□□ -0.44
MKS1-210ENST00000581180 IGHV1-69P01742 117 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms