RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 C12orf4Q9NQ89 552 aa12.82□□□□□ -0.36
SS18-216ENST00000580751 MGAT4AQ9UM21 535 aa12.82□□□□□ -0.36
SS18-216ENST00000580751 ARHGAP32A7KAX9 2087 aa12.82□□□□□ -0.36
SS18-216ENST00000580751 A0A1W2PQ09 198 aa12.81□□□□□ -0.36
SS18-216ENST00000580751 SLC33A1O00400 549 aaPredicted RBP12.81□□□□□ -0.36
SS18-216ENST00000580751 MGST3O14880 152 aa12.81□□□□□ -0.36
SS18-216ENST00000580751 ORC5O43913 435 aa12.81□□□□□ -0.36
SS18-216ENST00000580751 NAT1P18440 290 aa12.81□□□□□ -0.36
SS18-216ENST00000580751 HNF1AP20823 631 aa12.81□□□□□ -0.36
SS18-216ENST00000580751 GDNFP39905 211 aa12.81□□□□□ -0.36
SS18-216ENST00000580751 OR3A1P47881 315 aa12.81□□□□□ -0.36
SS18-216ENST00000580751 CR1LQ2VPA4 569 aa12.81□□□□□ -0.36
SS18-216ENST00000580751 PAN3Q58A45 887 aaKnown RBP12.81□□□□□ -0.36
SS18-216ENST00000580751 STEAP3Q658P3 488 aa12.81□□□□□ -0.36
SS18-216ENST00000580751 Q6ZS49 121 aa12.81□□□□□ -0.36
SS18-216ENST00000580751 Q71RC1 249 aaPredicted RBP12.81□□□□□ -0.36
SS18-216ENST00000580751 LYSMD2Q8IV50 215 aa12.81□□□□□ -0.36
SS18-216ENST00000580751 TOMM5Q8N4H5 51 aa12.81□□□□□ -0.36
SS18-216ENST00000580751 DTX3Q8N9I9 347 aa12.81□□□□□ -0.36
SS18-216ENST00000580751 OR4S1Q8NGB4 309 aa12.81□□□□□ -0.36
SS18-216ENST00000580751 CMSS1Q9BQ75 279 aaKnown RBP12.81□□□□□ -0.36
SS18-216ENST00000580751 SULT4A1Q9BR01 284 aa12.81□□□□□ -0.36
SS18-216ENST00000580751 FAAP24Q9BTP7 215 aa12.81□□□□□ -0.36
SS18-216ENST00000580751 SHARPINQ9H0F6 387 aa12.81□□□□□ -0.36
SS18-216ENST00000580751 C7orf69Q9H7B7 122 aa12.81□□□□□ -0.36
SS18-216ENST00000580751 ABCB10Q9NRK6 738 aa12.81□□□□□ -0.36
SS18-216ENST00000580751 LPAR3Q9UBY5 353 aa12.81□□□□□ -0.36
SS18-216ENST00000580751 SETD2Q9BYW2 2564 aaPredicted RBP12.8□□□□□ -0.36
SS18-216ENST00000580751 NAV3Q8IVL0 2385 aa12.8□□□□□ -0.36
SS18-216ENST00000580751 A0A1W2PPH5 198 aa12.8□□□□□ -0.36
SS18-216ENST00000580751 ANKRD20A5PA0PJZ0 165 aa12.8□□□□□ -0.36
SS18-216ENST00000580751 FUOMA2VDF0 154 aa12.8□□□□□ -0.36
SS18-216ENST00000580751 CENPXA8MT69 81 aa12.8□□□□□ -0.36
SS18-216ENST00000580751 PPIAL4GP0DN37 164 aa12.8□□□□□ -0.36
SS18-216ENST00000580751 FAUP35544 74 aaKnown RBP12.8□□□□□ -0.36
SS18-216ENST00000580751 EDDM3BP56851 147 aa12.8□□□□□ -0.36
SS18-216ENST00000580751 RPL31P62899 125 aaKnown RBP12.8□□□□□ -0.36
SS18-216ENST00000580751 ASAH1Q13510 395 aa12.8□□□□□ -0.36
SS18-216ENST00000580751 EDDM3AQ14507 147 aa12.8□□□□□ -0.36
SS18-216ENST00000580751 ACTBL2Q562R1 376 aa12.8□□□□□ -0.36
SS18-216ENST00000580751 TRAPPC6BQ86SZ2 158 aa12.8□□□□□ -0.36
SS18-216ENST00000580751 TMEM229BQ8NBD8 167 aa12.8□□□□□ -0.36
SS18-216ENST00000580751 LY6G5BQ8NDX9 201 aa12.8□□□□□ -0.36
SS18-216ENST00000580751 TMPRSS13Q9BYE2 586 aa12.8□□□□□ -0.36
SS18-216ENST00000580751 PPA2Q9H2U2 334 aa12.8□□□□□ -0.36
SS18-216ENST00000580751 ZMAT3Q9HA38 289 aaKnown RBP12.8□□□□□ -0.36
SS18-216ENST00000580751 AK3Q9UIJ7 227 aa12.8□□□□□ -0.36
SS18-216ENST00000580751 AUP1Q9Y679 476 aa12.8□□□□□ -0.36
SS18-216ENST00000580751 FN1P02751 2386 aaKnown RBP12.8□□□□□ -0.36
SS18-216ENST00000580751 NIPBLQ6KC79 2804 aaeCLIP12.79□□□□□ -0.36
SS18-216ENST00000580751 MEIOCA2RUB1 952 aa12.79□□□□□ -0.36
SS18-216ENST00000580751 NAP1L6A6NFF2 107 aa12.79□□□□□ -0.36
SS18-216ENST00000580751 HSPB6O14558 160 aa12.79□□□□□ -0.36
SS18-216ENST00000580751 NAPSAO96009 420 aa12.79□□□□□ -0.36
SS18-216ENST00000580751 ERP29P30040 261 aaKnown RBP12.79□□□□□ -0.36
SS18-216ENST00000580751 P2RX3P56373 397 aa12.79□□□□□ -0.36
SS18-216ENST00000580751 TAS2R19P59542 299 aa12.79□□□□□ -0.36
SS18-216ENST00000580751 MEF2CQ06413 473 aaPredicted RBP12.79□□□□□ -0.36
SS18-216ENST00000580751 PAX8Q06710 450 aa12.79□□□□□ -0.36
SS18-216ENST00000580751 PDCD1Q15116 288 aa12.79□□□□□ -0.36
SS18-216ENST00000580751 FAM120AOSQ5T036 256 aa12.79□□□□□ -0.36
SS18-216ENST00000580751 MOB1BQ7L9L4 216 aa12.79□□□□□ -0.36
SS18-216ENST00000580751 ZNF554Q86TJ5 538 aa12.79□□□□□ -0.36
SS18-216ENST00000580751 HOGA1Q86XE5 327 aa12.79□□□□□ -0.36
SS18-216ENST00000580751 FAM185AQ8N0U4 392 aa12.79□□□□□ -0.36
SS18-216ENST00000580751 KIR3DL3Q8N743 410 aa12.79□□□□□ -0.36
SS18-216ENST00000580751 IFT46Q9NQC8 304 aa12.79□□□□□ -0.36
SS18-216ENST00000580751 C19orf12Q9NSK7 152 aa12.79□□□□□ -0.36
SS18-216ENST00000580751 ETAA1Q9NY74 926 aa12.79□□□□□ -0.36
SS18-216ENST00000580751 KLK11Q9UBX7 282 aa12.79□□□□□ -0.36
SS18-216ENST00000580751 CDC42EP3Q9UKI2 254 aa12.79□□□□□ -0.36
SS18-216ENST00000580751 hADV38S2A0JD32 116 aa12.78□□□□□ -0.36
SS18-216ENST00000580751 INAFM1C9JVW0 142 aa12.78□□□□□ -0.36
SS18-216ENST00000580751 SSX5O60225 188 aa12.78□□□□□ -0.36
SS18-216ENST00000580751 IFITM3Q01628 133 aa12.78□□□□□ -0.36
SS18-216ENST00000580751 MADCAM1Q13477 382 aa12.78□□□□□ -0.36
SS18-216ENST00000580751 KLF9Q13886 244 aaPredicted RBP12.78□□□□□ -0.36
SS18-216ENST00000580751 ATXN7L3Q14CW9 347 aaPredicted RBP12.78□□□□□ -0.36
SS18-216ENST00000580751 METTL11BQ5VVY1 283 aa12.78□□□□□ -0.36
SS18-216ENST00000580751 ZNF57Q68EA5 555 aaPredicted RBP12.78□□□□□ -0.36
SS18-216ENST00000580751 SLC35E4Q6ICL7 350 aa12.78□□□□□ -0.36
SS18-216ENST00000580751 MZT2BQ6NZ67 158 aa12.78□□□□□ -0.36
SS18-216ENST00000580751 MINDY2Q8NBR6 621 aa12.78□□□□□ -0.36
SS18-216ENST00000580751 NEK7Q8TDX7 302 aa12.78□□□□□ -0.36
SS18-216ENST00000580751 NUDCD2Q8WVJ2 157 aa12.78□□□□□ -0.36
SS18-216ENST00000580751 ONECUT1Q9UBC0 465 aa12.78□□□□□ -0.36
SS18-216ENST00000580751 KPTNQ9Y664 436 aa12.78□□□□□ -0.36
SS18-216ENST00000580751 TMEM30CPA0ZSE6 113 aa12.77□□□□□ -0.37
SS18-216ENST00000580751 LANCL1O43813 399 aa12.77□□□□□ -0.37
SS18-216ENST00000580751 DIRAS3O95661 229 aa12.77□□□□□ -0.37
SS18-216ENST00000580751 PTTG1O95997 202 aa12.77□□□□□ -0.37
SS18-216ENST00000580751 CD74P04233 296 aa12.77□□□□□ -0.37
SS18-216ENST00000580751 FCGR3AP08637 254 aa12.77□□□□□ -0.37
SS18-216ENST00000580751 AKAIN1P0CW23 69 aa12.77□□□□□ -0.37
SS18-216ENST00000580751 PTHLHP12272 177 aa12.77□□□□□ -0.37
SS18-216ENST00000580751 KIR2DS4P43632 304 aa12.77□□□□□ -0.37
SS18-216ENST00000580751 TAS2R46P59540 309 aa12.77□□□□□ -0.37
SS18-216ENST00000580751 GUCA2AQ02747 115 aa12.77□□□□□ -0.37
SS18-216ENST00000580751 MEF2DQ14814 521 aa12.77□□□□□ -0.37
SS18-216ENST00000580751 KIR2DS1Q14954 304 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms