RNA–Protein interactions for RNA: ENST00000580095.5

TOP3A-209, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 1 (best)

Gene TOP3A, Length 2,929 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-209ENST00000580095 TK1P04183 234 aa8.97□□□□□ -0.97
TOP3A-209ENST00000580095 PPP1CCP36873 323 aaKnown RBP8.97□□□□□ -0.97
TOP3A-209ENST00000580095 WNT5AP41221 380 aa8.97□□□□□ -0.97
TOP3A-209ENST00000580095 CEBPGP53567 150 aa8.97□□□□□ -0.97
TOP3A-209ENST00000580095 C10orf91Q5T1B1 145 aa8.97□□□□□ -0.97
TOP3A-209ENST00000580095 CLEC2AQ6UVW9 174 aa8.97□□□□□ -0.97
TOP3A-209ENST00000580095 P4HA3Q7Z4N8 544 aa8.97□□□□□ -0.97
TOP3A-209ENST00000580095 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.97□□□□□ -0.97
TOP3A-209ENST00000580095 CLCC1Q96S66 551 aa8.97□□□□□ -0.97
TOP3A-209ENST00000580095 SUCNR1Q9BXA5 334 aa8.97□□□□□ -0.97
TOP3A-209ENST00000580095 IGSF23A1L1A6 192 aa8.96□□□□□ -0.97
TOP3A-209ENST00000580095 SLC22A20A6NK97 555 aa8.96□□□□□ -0.97
TOP3A-209ENST00000580095 TRAPPC2LH3BP13 241 aa8.96□□□□□ -0.97
TOP3A-209ENST00000580095 RPL36A-HNRNPH2H7BZ11 118 aa8.96□□□□□ -0.97
TOP3A-209ENST00000580095 TXNL1O43396 289 aa8.96□□□□□ -0.97
TOP3A-209ENST00000580095 TMEM50AO95807 157 aa8.96□□□□□ -0.97
TOP3A-209ENST00000580095 MBP02144 154 aa8.96□□□□□ -0.97
TOP3A-209ENST00000580095 CD5P06127 495 aa8.96□□□□□ -0.97
TOP3A-209ENST00000580095 SNRNP70P08621 437 aaKnown RBP8.96□□□□□ -0.97
TOP3A-209ENST00000580095 CELA3BP08861 270 aa8.96□□□□□ -0.97
TOP3A-209ENST00000580095 EIF5AP63241 154 aaKnown RBP8.96□□□□□ -0.97
TOP3A-209ENST00000580095 PMP22Q01453 160 aa8.96□□□□□ -0.97
TOP3A-209ENST00000580095 RNF212Q495C1 297 aa8.96□□□□□ -0.97
TOP3A-209ENST00000580095 TMEM211Q6ICI0 200 aa8.96□□□□□ -0.97
TOP3A-209ENST00000580095 MCEMP1Q8IX19 187 aa8.96□□□□□ -0.97
TOP3A-209ENST00000580095 UBAC2Q8NBM4 344 aa8.96□□□□□ -0.97
TOP3A-209ENST00000580095 IP6K3Q96PC2 410 aa8.96□□□□□ -0.97
TOP3A-209ENST00000580095 RSRP1Q9BUV0 290 aa8.96□□□□□ -0.97
TOP3A-209ENST00000580095 PLEKHA2Q9HB19 425 aa8.96□□□□□ -0.97
TOP3A-209ENST00000580095 IL36GQ9NZH8 169 aa8.96□□□□□ -0.97
TOP3A-209ENST00000580095 B4GALT7Q9UBV7 327 aa8.96□□□□□ -0.97
TOP3A-209ENST00000580095 GTF3C1Q12789 2109 aa8.96□□□□□ -0.98
TOP3A-209ENST00000580095 MED12LQ86YW9 2145 aa8.96□□□□□ -0.98
TOP3A-209ENST00000580095 ATXN7O15265 892 aaPredicted RBP8.96□□□□□ -0.98
TOP3A-209ENST00000580095 OR13C7P0DN81 318 aa8.96□□□□□ -0.98
TOP3A-209ENST00000580095 ERVS71-1P61550 626 aa8.96□□□□□ -0.98
TOP3A-209ENST00000580095 RUNX1Q01196 453 aa8.96□□□□□ -0.98
TOP3A-209ENST00000580095 EWSR1Q01844 656 aaKnown RBP eCLIP8.96□□□□□ -0.98
TOP3A-209ENST00000580095 CEACAM21Q3KPI0 293 aa8.96□□□□□ -0.98
TOP3A-209ENST00000580095 RNFT1Q5M7Z0 435 aa8.96□□□□□ -0.98
TOP3A-209ENST00000580095 TGIF2LXQ8IUE1 241 aa8.96□□□□□ -0.98
TOP3A-209ENST00000580095 GCNT2Q8N0V5 402 aa8.96□□□□□ -0.98
TOP3A-209ENST00000580095 DTD1Q8TEA8 209 aa8.96□□□□□ -0.98
TOP3A-209ENST00000580095 SPRY4Q9C004 299 aa8.96□□□□□ -0.98
TOP3A-209ENST00000580095 TMEM222Q9H0R3 208 aa8.96□□□□□ -0.98
TOP3A-209ENST00000580095 Q9N2K0 584 aa8.96□□□□□ -0.98
TOP3A-209ENST00000580095 RPS10P5Q9NQ39 176 aa8.96□□□□□ -0.98
TOP3A-209ENST00000580095 PARP11Q9NR21 331 aa8.96□□□□□ -0.98
TOP3A-209ENST00000580095 FAM212BQ9NTI7 297 aaPredicted RBP8.96□□□□□ -0.98
TOP3A-209ENST00000580095 ZNF391Q9UJN7 358 aa8.96□□□□□ -0.98
TOP3A-209ENST00000580095 IGKV3D-15A0A087WSY6 115 aa8.95□□□□□ -0.98
TOP3A-209ENST00000580095 MARCH11A6NNE9 402 aa8.95□□□□□ -0.98
TOP3A-209ENST00000580095 FAM157AC9JC47 383 aa8.95□□□□□ -0.98
TOP3A-209ENST00000580095 GPR137BO60478 399 aa8.95□□□□□ -0.98
TOP3A-209ENST00000580095 MEOX1P50221 254 aa8.95□□□□□ -0.98
TOP3A-209ENST00000580095 RAB4BP61018 213 aa8.95□□□□□ -0.98
TOP3A-209ENST00000580095 CCL20P78556 96 aa8.95□□□□□ -0.98
TOP3A-209ENST00000580095 HABP2Q14520 560 aaPredicted RBP8.95□□□□□ -0.98
TOP3A-209ENST00000580095 GNMTQ14749 295 aa8.95□□□□□ -0.98
TOP3A-209ENST00000580095 AVPI1Q5T686 147 aa8.95□□□□□ -0.98
TOP3A-209ENST00000580095 DHRS7BQ6IAN0 325 aaPredicted RBP8.95□□□□□ -0.98
TOP3A-209ENST00000580095 UNQ6494/PRO21346Q6UXR6 183 aa8.95□□□□□ -0.98
TOP3A-209ENST00000580095 ZFP62Q8NB50 900 aaPredicted RBP8.95□□□□□ -0.98
TOP3A-209ENST00000580095 SUMF2Q8NBJ7 301 aa8.95□□□□□ -0.98
TOP3A-209ENST00000580095 TMEM171Q8WVE6 324 aa8.95□□□□□ -0.98
TOP3A-209ENST00000580095 POM121L2Q96KW2 1035 aa8.95□□□□□ -0.98
TOP3A-209ENST00000580095 RARRES2Q99969 163 aa8.95□□□□□ -0.98
TOP3A-209ENST00000580095 OPN3Q9H1Y3 402 aaPredicted RBP8.95□□□□□ -0.98
TOP3A-209ENST00000580095 SPACA1Q9HBV2 294 aa8.95□□□□□ -0.98
TOP3A-209ENST00000580095 PCNX2A6NKB5 2137 aa8.95□□□□□ -0.98
TOP3A-209ENST00000580095 M0R036 132 aa8.95□□□□□ -0.98
TOP3A-209ENST00000580095 TNFSF15O95150 251 aa8.95□□□□□ -0.98
TOP3A-209ENST00000580095 GAPDHP04406 335 aaKnown RBP8.95□□□□□ -0.98
TOP3A-209ENST00000580095 PLA2G5P39877 138 aa8.95□□□□□ -0.98
TOP3A-209ENST00000580095 NKX2-1P43699 371 aaPredicted RBP8.95□□□□□ -0.98
TOP3A-209ENST00000580095 FGF12P61328 243 aa8.95□□□□□ -0.98
TOP3A-209ENST00000580095 HNF4GQ14541 408 aa8.95□□□□□ -0.98
TOP3A-209ENST00000580095 PEA15Q15121 130 aa8.95□□□□□ -0.98
TOP3A-209ENST00000580095 ALKBH6Q3KRA9 238 aa8.95□□□□□ -0.98
TOP3A-209ENST00000580095 MKXQ8IYA7 352 aa8.95□□□□□ -0.98
TOP3A-209ENST00000580095 CCDC71LQ8N9Z2 235 aa8.95□□□□□ -0.98
TOP3A-209ENST00000580095 OR4D5Q8NGN0 318 aa8.95□□□□□ -0.98
TOP3A-209ENST00000580095 APOBEC3DQ96AK3 386 aaPredicted RBP8.95□□□□□ -0.98
TOP3A-209ENST00000580095 TMEM45BQ96B21 275 aa8.95□□□□□ -0.98
TOP3A-209ENST00000580095 C14orf79Q96F83 325 aa8.95□□□□□ -0.98
TOP3A-209ENST00000580095 HIST1H2AAQ96QV6 131 aa8.95□□□□□ -0.98
TOP3A-209ENST00000580095 OR1A1Q9P1Q5 309 aa8.95□□□□□ -0.98
TOP3A-209ENST00000580095 BORCS7-ASMTA0A0B4J1R7 106 aa8.94□□□□□ -0.98
TOP3A-209ENST00000580095 A0A0G2JRQ6 117 aa8.94□□□□□ -0.98
TOP3A-209ENST00000580095 ZNF724A8MTY0 619 aa8.94□□□□□ -0.98
TOP3A-209ENST00000580095 NAPSAO96009 420 aa8.94□□□□□ -0.98
TOP3A-209ENST00000580095 MT-CO3P00414 261 aa8.94□□□□□ -0.98
TOP3A-209ENST00000580095 TFF1P04155 84 aa8.94□□□□□ -0.98
TOP3A-209ENST00000580095 DANCRP0C864 163 aa8.94□□□□□ -0.98
TOP3A-209ENST00000580095 ZNF44P15621 663 aa8.94□□□□□ -0.98
TOP3A-209ENST00000580095 P2RY1P47900 373 aa8.94□□□□□ -0.98
TOP3A-209ENST00000580095 DVL1P1P54792 670 aaPredicted RBP8.94□□□□□ -0.98
TOP3A-209ENST00000580095 GUK1Q16774 197 aa8.94□□□□□ -0.98
TOP3A-209ENST00000580095 FAM53AQ6NSI3 398 aaPredicted RBP8.94□□□□□ -0.98
TOP3A-209ENST00000580095 SELENOHQ8IZQ5 122 aaKnown RBP8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms