RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 ZNF501Q96CX3 271 aaPredicted RBP2.34□□□□□ -2.03
KPNB1-208ENST00000580019 FBXO17Q96EF6 278 aa2.34□□□□□ -2.03
KPNB1-208ENST00000580019 IMP4Q96G21 291 aaKnown RBP2.34□□□□□ -2.03
KPNB1-208ENST00000580019 SMARCD1Q96GM5 515 aa2.34□□□□□ -2.03
KPNB1-208ENST00000580019 OR10C1Q96KK4 312 aa2.34□□□□□ -2.03
KPNB1-208ENST00000580019 BIRC8Q96P09 236 aa2.34□□□□□ -2.03
KPNB1-208ENST00000580019 SFXN3Q9BWM7 321 aa2.34□□□□□ -2.03
KPNB1-208ENST00000580019 SUCNR1Q9BXA5 334 aa2.34□□□□□ -2.03
KPNB1-208ENST00000580019 OR11A1Q9GZK7 315 aa2.34□□□□□ -2.03
KPNB1-208ENST00000580019 TPK1Q9H3S4 243 aa2.34□□□□□ -2.03
KPNB1-208ENST00000580019 TRABDQ9H4I3 376 aa2.34□□□□□ -2.03
KPNB1-208ENST00000580019 HEBP1Q9NRV9 189 aa2.34□□□□□ -2.03
KPNB1-208ENST00000580019 DDX19AQ9NUU7 478 aaKnown RBP2.34□□□□□ -2.03
KPNB1-208ENST00000580019 TMEM100Q9NV29 134 aa2.34□□□□□ -2.03
KPNB1-208ENST00000580019 RAB26Q9ULW5 256 aa2.34□□□□□ -2.03
KPNB1-208ENST00000580019 FRYQ5TBA9 3013 aa2.34□□□□□ -2.03
KPNB1-208ENST00000580019 COL4A1P02462 1669 aa2.34□□□□□ -2.04
KPNB1-208ENST00000580019 WDFY3Q8IZQ1 3526 aa2.34□□□□□ -2.04
KPNB1-208ENST00000580019 SIPA1L3O60292 1781 aaPredicted RBP2.33□□□□□ -2.04
KPNB1-208ENST00000580019 OTOGLQ3ZCN5 2332 aa2.33□□□□□ -2.04
KPNB1-208ENST00000580019 TRAV8-2A0A0B4J237 113 aa2.33□□□□□ -2.04
KPNB1-208ENST00000580019 IGHV1-69DA0A0B4J2H0 117 aa2.33□□□□□ -2.04
KPNB1-208ENST00000580019 CIB4A0PJX0 185 aa2.33□□□□□ -2.04
KPNB1-208ENST00000580019 METTL15A6NJ78 407 aa2.33□□□□□ -2.04
KPNB1-208ENST00000580019 ARGFXA6NJG6 315 aa2.33□□□□□ -2.04
KPNB1-208ENST00000580019 GALR3O60755 368 aaPredicted RBP2.33□□□□□ -2.04
KPNB1-208ENST00000580019 VENTXO95231 258 aa2.33□□□□□ -2.04
KPNB1-208ENST00000580019 MOSP00540 346 aa2.33□□□□□ -2.04
KPNB1-208ENST00000580019 FABP3P05413 133 aa2.33□□□□□ -2.04
KPNB1-208ENST00000580019 IGKV5-2P06315 115 aa2.33□□□□□ -2.04
KPNB1-208ENST00000580019 CTSLP07711 333 aa2.33□□□□□ -2.04
KPNB1-208ENST00000580019 TDGF1P13385 188 aa2.33□□□□□ -2.04
KPNB1-208ENST00000580019 ALOX5APP20292 161 aa2.33□□□□□ -2.04
KPNB1-208ENST00000580019 TAC1P20366 129 aa2.33□□□□□ -2.04
KPNB1-208ENST00000580019 SSTR5P35346 364 aa2.33□□□□□ -2.04
KPNB1-208ENST00000580019 APLNRP35414 380 aa2.33□□□□□ -2.04
KPNB1-208ENST00000580019 DRD3P35462 400 aa2.33□□□□□ -2.04
KPNB1-208ENST00000580019 TALDO1P37837 337 aa2.33□□□□□ -2.04
KPNB1-208ENST00000580019 P2RY4P51582 365 aa2.33□□□□□ -2.04
KPNB1-208ENST00000580019 TDGF1P3P51864 188 aa2.33□□□□□ -2.04
KPNB1-208ENST00000580019 NDUFA8P51970 172 aa2.33□□□□□ -2.04
KPNB1-208ENST00000580019 SYNJ2BPP57105 145 aa2.33□□□□□ -2.04
KPNB1-208ENST00000580019 CXCL6P80162 114 aa2.33□□□□□ -2.04
KPNB1-208ENST00000580019 IFITM3Q01628 133 aa2.33□□□□□ -2.04
KPNB1-208ENST00000580019 SMAGPQ0VAQ4 97 aa2.33□□□□□ -2.04
KPNB1-208ENST00000580019 KRR1Q13601 381 aaKnown RBP2.33□□□□□ -2.04
KPNB1-208ENST00000580019 OR2F1Q13607 317 aa2.33□□□□□ -2.04
KPNB1-208ENST00000580019 POU6F1Q14863 301 aa2.33□□□□□ -2.04
KPNB1-208ENST00000580019 NSDHLQ15738 373 aa2.33□□□□□ -2.04
KPNB1-208ENST00000580019 MOGQ16653 247 aa2.33□□□□□ -2.04
KPNB1-208ENST00000580019 ATP6AP1LQ52LC2 224 aa2.33□□□□□ -2.04
KPNB1-208ENST00000580019 CLEC12AQ5QGZ9 265 aa2.33□□□□□ -2.04
KPNB1-208ENST00000580019 METTL21CQ5VZV1 264 aa2.33□□□□□ -2.04
KPNB1-208ENST00000580019 PAMR1Q6UXH9 720 aa2.33□□□□□ -2.04
KPNB1-208ENST00000580019 RASSF6Q6ZTQ3 369 aa2.33□□□□□ -2.04
KPNB1-208ENST00000580019 TAC4Q86UU9 113 aa2.33□□□□□ -2.04
KPNB1-208ENST00000580019 COMMD7Q86VX2 200 aa2.33□□□□□ -2.04
KPNB1-208ENST00000580019 PRSS58Q8IYP2 241 aa2.33□□□□□ -2.04
KPNB1-208ENST00000580019 CCNYL1Q8N7R7 359 aa2.33□□□□□ -2.04
KPNB1-208ENST00000580019 GPR26Q8NDV2 337 aa2.33□□□□□ -2.04
KPNB1-208ENST00000580019 OR2D3Q8NGH3 330 aa2.33□□□□□ -2.04
KPNB1-208ENST00000580019 OR4C13Q8NGP0 309 aa2.33□□□□□ -2.04
KPNB1-208ENST00000580019 ZNF420Q8TAQ5 688 aaPredicted RBP2.33□□□□□ -2.04
KPNB1-208ENST00000580019 NEK7Q8TDX7 302 aa2.33□□□□□ -2.04
KPNB1-208ENST00000580019 DYDC1Q8WWB3 177 aa2.33□□□□□ -2.04
KPNB1-208ENST00000580019 CYGBQ8WWM9 190 aa2.33□□□□□ -2.04
KPNB1-208ENST00000580019 PYDC1Q8WXC3 89 aa2.33□□□□□ -2.04
KPNB1-208ENST00000580019 MRPL48Q96GC5 212 aaKnown RBP2.33□□□□□ -2.04
KPNB1-208ENST00000580019 ZIM3Q96PE6 472 aa2.33□□□□□ -2.04
KPNB1-208ENST00000580019 PHB2Q99623 299 aa2.33□□□□□ -2.04
KPNB1-208ENST00000580019 DOK1Q99704 481 aa2.33□□□□□ -2.04
KPNB1-208ENST00000580019 NRIP2Q9BQI9 281 aa2.33□□□□□ -2.04
KPNB1-208ENST00000580019 TIPINQ9BVW5 301 aa2.33□□□□□ -2.04
KPNB1-208ENST00000580019 TSGA10Q9BZW7 698 aa2.33□□□□□ -2.04
KPNB1-208ENST00000580019 LINC00597Q9H2U6 94 aa2.33□□□□□ -2.04
KPNB1-208ENST00000580019 FBXL15Q9H469 300 aa2.33□□□□□ -2.04
KPNB1-208ENST00000580019 SCRT2Q9NQ03 307 aa2.33□□□□□ -2.04
KPNB1-208ENST00000580019 CCL28Q9NRJ3 127 aa2.33□□□□□ -2.04
KPNB1-208ENST00000580019 DMAC2Q9NW81 257 aa2.33□□□□□ -2.04
KPNB1-208ENST00000580019 GID8Q9NWU2 228 aa2.33□□□□□ -2.04
KPNB1-208ENST00000580019 GLTPQ9NZD2 209 aa2.33□□□□□ -2.04
KPNB1-208ENST00000580019 VPS29Q9UBQ0 182 aa2.33□□□□□ -2.04
KPNB1-208ENST00000580019 PCYOX1Q9UHG3 505 aa2.33□□□□□ -2.04
KPNB1-208ENST00000580019 PRO0628Q9UI54 55 aa2.33□□□□□ -2.04
KPNB1-208ENST00000580019 SIGLEC7Q9Y286 467 aa2.33□□□□□ -2.04
KPNB1-208ENST00000580019 ALG5Q9Y673 324 aa2.33□□□□□ -2.04
KPNB1-208ENST00000580019 SPTA1P02549 2419 aa2.33□□□□□ -2.04
KPNB1-208ENST00000580019 GBF1Q92538 1859 aa2.33□□□□□ -2.04
KPNB1-208ENST00000580019 HECTD1Q9ULT8 2610 aa2.32□□□□□ -2.04
KPNB1-208ENST00000580019 ANKRD36CQ5JPF3 1778 aa2.32□□□□□ -2.04
KPNB1-208ENST00000580019 IGHV3OR16-10A0A075B7F0 116 aa2.32□□□□□ -2.04
KPNB1-208ENST00000580019 SMIM26A0A096LP01 95 aa2.32□□□□□ -2.04
KPNB1-208ENST00000580019 CENPVL3A0A0U1RRI6 287 aa2.32□□□□□ -2.04
KPNB1-208ENST00000580019 A0A1B0GV72 72 aa2.32□□□□□ -2.04
KPNB1-208ENST00000580019 GNG14A0A1W2PPG7 69 aa2.32□□□□□ -2.04
KPNB1-208ENST00000580019 RBFOX3A6NFN3 312 aa2.32□□□□□ -2.04
KPNB1-208ENST00000580019 SMIM9A6NGZ8 99 aa2.32□□□□□ -2.04
KPNB1-208ENST00000580019 CLDN24A6NM45 220 aa2.32□□□□□ -2.04
KPNB1-208ENST00000580019 C2orf74A8MZ97 194 aa2.32□□□□□ -2.04
KPNB1-208ENST00000580019 PSMD12O00232 456 aaPredicted RBP2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms