RNA–Protein interactions for RNA: ENST00000577636.5

SS18-207, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-207ENST00000577636 SURF2Q15527 256 aaPredicted RBP8.51□□□□□ -1.05
SS18-207ENST00000577636 ADIPOQQ15848 244 aa8.51□□□□□ -1.05
SS18-207ENST00000577636 SRSF7Q16629 238 aaKnown RBP eCLIP8.51□□□□□ -1.05
SS18-207ENST00000577636 ZFP69Q49AA0 526 aa8.51□□□□□ -1.05
SS18-207ENST00000577636 PAN3Q58A45 887 aaKnown RBP8.51□□□□□ -1.05
SS18-207ENST00000577636 PEG10Q86TG7 708 aaKnown RBP8.51□□□□□ -1.05
SS18-207ENST00000577636 WDR86Q86TI4 376 aa8.51□□□□□ -1.05
SS18-207ENST00000577636 SUMF2Q8NBJ7 301 aa8.51□□□□□ -1.05
SS18-207ENST00000577636 OR11L1Q8NGX0 322 aa8.51□□□□□ -1.05
SS18-207ENST00000577636 GTF3AQ92664 365 aaKnown RBP8.51□□□□□ -1.05
SS18-207ENST00000577636 DPCDQ9BVM2 203 aaPredicted RBP8.51□□□□□ -1.05
SS18-207ENST00000577636 TLNRD1Q9H1K6 362 aa8.51□□□□□ -1.05
SS18-207ENST00000577636 NARFLQ9H6Q4 476 aa8.51□□□□□ -1.05
SS18-207ENST00000577636 LPAR2Q9HBW0 351 aa8.51□□□□□ -1.05
SS18-207ENST00000577636 UFSP2Q9NUQ7 469 aa8.51□□□□□ -1.05
SS18-207ENST00000577636 RCC2Q9P258 522 aaKnown RBP8.51□□□□□ -1.05
SS18-207ENST00000577636 ZNF230Q9UIE0 474 aaPredicted RBP8.51□□□□□ -1.05
SS18-207ENST00000577636 ZNF222Q9UK12 451 aa8.51□□□□□ -1.05
SS18-207ENST00000577636 PLCE1Q9P212 2302 aa8.51□□□□□ -1.05
SS18-207ENST00000577636 LRRC30A6NM36 301 aa8.5□□□□□ -1.05
SS18-207ENST00000577636 F8VVB4 439 aa8.5□□□□□ -1.05
SS18-207ENST00000577636 F8VWA3 439 aa8.5□□□□□ -1.05
SS18-207ENST00000577636 BOLA2-SMG1P6H3BVE0 249 aa8.5□□□□□ -1.05
SS18-207ENST00000577636 SPRY3O43610 288 aa8.5□□□□□ -1.05
SS18-207ENST00000577636 CTXN2P0C2S0 81 aa8.5□□□□□ -1.05
SS18-207ENST00000577636 ZNF735P0CB33 412 aa8.5□□□□□ -1.05
SS18-207ENST00000577636 ANXA3P12429 323 aa8.5□□□□□ -1.05
SS18-207ENST00000577636 IRF2P14316 349 aa8.5□□□□□ -1.05
SS18-207ENST00000577636 DUSP1P28562 367 aa8.5□□□□□ -1.05
SS18-207ENST00000577636 GMFBP60983 142 aa8.5□□□□□ -1.05
SS18-207ENST00000577636 ERVK11-1P61568 191 aa8.5□□□□□ -1.05
SS18-207ENST00000577636 TNFAIP6P98066 277 aaPredicted RBP8.5□□□□□ -1.05
SS18-207ENST00000577636 CD83Q01151 205 aa8.5□□□□□ -1.05
SS18-207ENST00000577636 PDCD1Q15116 288 aa8.5□□□□□ -1.05
SS18-207ENST00000577636 C11orf91Q3C1V1 193 aa8.5□□□□□ -1.05
SS18-207ENST00000577636 LCE2DQ5TA82 110 aaPredicted RBP8.5□□□□□ -1.05
SS18-207ENST00000577636 PRAMEF6Q5VXH4 476 aa8.5□□□□□ -1.05
SS18-207ENST00000577636 FAHD2BQ6P2I3 314 aaPredicted RBP8.5□□□□□ -1.05
SS18-207ENST00000577636 BRICD5Q6PL45 260 aa8.5□□□□□ -1.05
SS18-207ENST00000577636 Q6ZR03 302 aa8.5□□□□□ -1.05
SS18-207ENST00000577636 MOB1BQ7L9L4 216 aa8.5□□□□□ -1.05
SS18-207ENST00000577636 FAM90A1Q86YD7 464 aa8.5□□□□□ -1.05
SS18-207ENST00000577636 OR10Z1Q8NGY1 313 aa8.5□□□□□ -1.05
SS18-207ENST00000577636 MAFIPQ8WZ33 124 aa8.5□□□□□ -1.05
SS18-207ENST00000577636 ERGIC1Q969X5 290 aa8.5□□□□□ -1.05
SS18-207ENST00000577636 FAHD2AQ96GK7 314 aa8.5□□□□□ -1.05
SS18-207ENST00000577636 MRPL37Q9BZE1 423 aaKnown RBP8.5□□□□□ -1.05
SS18-207ENST00000577636 EGLN1Q9GZT9 426 aa8.5□□□□□ -1.05
SS18-207ENST00000577636 DYNLRB1Q9NP97 96 aa8.5□□□□□ -1.05
SS18-207ENST00000577636 DNAJB11Q9UBS4 358 aa8.5□□□□□ -1.05
SS18-207ENST00000577636 IL19Q9UHD0 177 aa8.5□□□□□ -1.05
SS18-207ENST00000577636 C14orf166Q9Y224 244 aaKnown RBP8.5□□□□□ -1.05
SS18-207ENST00000577636 ARFGEF3Q5TH69 2177 aa8.49□□□□□ -1.05
SS18-207ENST00000577636 IGHV3-64DA0A0J9YX35 117 aa8.49□□□□□ -1.05
SS18-207ENST00000577636 ZSCAN5BA6NJL1 495 aa8.49□□□□□ -1.05
SS18-207ENST00000577636 SIRPB1O00241 398 aa8.49□□□□□ -1.05
SS18-207ENST00000577636 HSPB6O14558 160 aa8.49□□□□□ -1.05
SS18-207ENST00000577636 DIRAS3O95661 229 aa8.49□□□□□ -1.05
SS18-207ENST00000577636 HAND1O96004 215 aa8.49□□□□□ -1.05
SS18-207ENST00000577636 KNG1P01042 644 aa8.49□□□□□ -1.05
SS18-207ENST00000577636 TK1P04183 234 aa8.49□□□□□ -1.05
SS18-207ENST00000577636 OR5H8P0DN80 308 aa8.49□□□□□ -1.05
SS18-207ENST00000577636 PGAM2P15259 253 aa8.49□□□□□ -1.05
SS18-207ENST00000577636 TNFRSF1AP19438 455 aa8.49□□□□□ -1.05
SS18-207ENST00000577636 DVL1P1P54792 670 aaPredicted RBP8.49□□□□□ -1.05
SS18-207ENST00000577636 UBE2MP61081 183 aaKnown RBP8.49□□□□□ -1.05
SS18-207ENST00000577636 ZNF146Q15072 292 aa8.49□□□□□ -1.05
SS18-207ENST00000577636 ATPAF1Q5TC12 328 aaPredicted RBP8.49□□□□□ -1.05
SS18-207ENST00000577636 ZNF626Q68DY1 528 aa8.49□□□□□ -1.05
SS18-207ENST00000577636 LIN54Q6MZP7 749 aa8.49□□□□□ -1.05
SS18-207ENST00000577636 WDR82Q6UXN9 313 aa8.49□□□□□ -1.05
SS18-207ENST00000577636 Q6ZS49 121 aa8.49□□□□□ -1.05
SS18-207ENST00000577636 OVCH2Q7RTZ1 564 aa8.49□□□□□ -1.05
SS18-207ENST00000577636 RTN4RL2Q86UN3 420 aa8.49□□□□□ -1.05
SS18-207ENST00000577636 LRP11Q86VZ4 500 aa8.49□□□□□ -1.05
SS18-207ENST00000577636 PPP1R35Q8TAP8 253 aa8.49□□□□□ -1.05
SS18-207ENST00000577636 ZFAND1Q8TCF1 268 aa8.49□□□□□ -1.05
SS18-207ENST00000577636 ZNF431Q8TF32 576 aaPredicted RBP8.49□□□□□ -1.05
SS18-207ENST00000577636 ZNF418Q8TF45 676 aaPredicted RBP8.49□□□□□ -1.05
SS18-207ENST00000577636 LRRC29Q8WV35 223 aa8.49□□□□□ -1.05
SS18-207ENST00000577636 NEU4Q8WWR8 484 aaPredicted RBP8.49□□□□□ -1.05
SS18-207ENST00000577636 RDH5Q92781 318 aa8.49□□□□□ -1.05
SS18-207ENST00000577636 MEGF10Q96KG7 1140 aa8.49□□□□□ -1.05
SS18-207ENST00000577636 OR2V2Q96R30 315 aa8.49□□□□□ -1.05
SS18-207ENST00000577636 HDHD3Q9BSH5 251 aaPredicted RBP8.49□□□□□ -1.05
SS18-207ENST00000577636 TREM2Q9NZC2 230 aa8.49□□□□□ -1.05
SS18-207ENST00000577636 OR14J1Q9UGF5 321 aa8.49□□□□□ -1.05
SS18-207ENST00000577636 TRDCB7Z8K6 153 aa8.48□□□□□ -1.05
SS18-207ENST00000577636 IFNL4K9M1U5 179 aa8.48□□□□□ -1.05
SS18-207ENST00000577636 M0R233 179 aa8.48□□□□□ -1.05
SS18-207ENST00000577636 SDCBPO00560 298 aaPredicted RBP8.48□□□□□ -1.05
SS18-207ENST00000577636 PTBP3O95758 552 aaKnown RBP8.48□□□□□ -1.05
SS18-207ENST00000577636 OR2H2O95918 312 aa8.48□□□□□ -1.05
SS18-207ENST00000577636 HLA-AP01891 365 aaKnown RBP8.48□□□□□ -1.05
SS18-207ENST00000577636 OR4E1P0C645 316 aa8.48□□□□□ -1.05
SS18-207ENST00000577636 AKR1C4P17516 323 aa8.48□□□□□ -1.05
SS18-207ENST00000577636 VAMP1P23763 118 aa8.48□□□□□ -1.05
SS18-207ENST00000577636 FPR2P25090 351 aa8.48□□□□□ -1.05
SS18-207ENST00000577636 KCNJ3P48549 501 aa8.48□□□□□ -1.05
SS18-207ENST00000577636 PPOXP50336 477 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms