RNA–Protein interactions for RNA: ENST00000577483.1

SSH2-205, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 1,630 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-205ENST00000577483 FAM27D1Q5T7N8 215 aa10.11□□□□□ -0.79
SSH2-205ENST00000577483 TMEM104Q8NE00 496 aa10.11□□□□□ -0.79
SSH2-205ENST00000577483 CCDC107Q8WV48 283 aa10.11□□□□□ -0.79
SSH2-205ENST00000577483 TOMM40LQ969M1 308 aa10.11□□□□□ -0.79
SSH2-205ENST00000577483 BANF2Q9H503 90 aa10.11□□□□□ -0.79
SSH2-205ENST00000577483 ERGIC3Q9Y282 383 aa10.11□□□□□ -0.79
SSH2-205ENST00000577483 OOSP1A8MZH6 123 aa10.11□□□□□ -0.79
SSH2-205ENST00000577483 PTGES3LE9PB15 166 aa10.11□□□□□ -0.79
SSH2-205ENST00000577483 ARHGDIBP52566 201 aa10.11□□□□□ -0.79
SSH2-205ENST00000577483 GPR176Q14439 515 aa10.11□□□□□ -0.79
SSH2-205ENST00000577483 NSUN5P1Q3KNT7 163 aa10.11□□□□□ -0.79
SSH2-205ENST00000577483 ABCA11PQ4W5N1 156 aa10.11□□□□□ -0.79
SSH2-205ENST00000577483 RNLSQ5VYX0 342 aa10.11□□□□□ -0.79
SSH2-205ENST00000577483 CCDC144NLQ6NUI1 221 aa10.11□□□□□ -0.79
SSH2-205ENST00000577483 ZNF497Q6ZNH5 498 aa10.11□□□□□ -0.79
SSH2-205ENST00000577483 NKAIN3Q8N8D7 197 aa10.11□□□□□ -0.79
SSH2-205ENST00000577483 OR10A7Q8NGE5 316 aa10.11□□□□□ -0.79
SSH2-205ENST00000577483 OR56B4Q8NH76 319 aa10.11□□□□□ -0.79
SSH2-205ENST00000577483 NEK7Q8TDX7 302 aa10.11□□□□□ -0.79
SSH2-205ENST00000577483 RPEQ96AT9 228 aa10.11□□□□□ -0.79
SSH2-205ENST00000577483 CITED2Q99967 270 aaPredicted RBP10.11□□□□□ -0.79
SSH2-205ENST00000577483 MND1Q9BWT6 205 aa10.11□□□□□ -0.79
SSH2-205ENST00000577483 AMMECR1Q9Y4X0 333 aaPredicted RBP10.11□□□□□ -0.79
SSH2-205ENST00000577483 TGP01266 2768 aa10.1□□□□□ -0.79
SSH2-205ENST00000577483 IGHV3-43A0A0B4J1X8 118 aa10.1□□□□□ -0.79
SSH2-205ENST00000577483 FAM90A18PA6NE21 464 aa10.1□□□□□ -0.79
SSH2-205ENST00000577483 FAM90A16PA6NEW6 464 aa10.1□□□□□ -0.79
SSH2-205ENST00000577483 FAM90A20PA6NIJ5 464 aa10.1□□□□□ -0.79
SSH2-205ENST00000577483 FAM90A9PA6NNJ1 464 aa10.1□□□□□ -0.79
SSH2-205ENST00000577483 FAM90A12PA8MX19 464 aa10.1□□□□□ -0.79
SSH2-205ENST00000577483 FAM90A5PA8MXJ8 464 aa10.1□□□□□ -0.79
SSH2-205ENST00000577483 AIPO00170 330 aa10.1□□□□□ -0.79
SSH2-205ENST00000577483 PEX14O75381 377 aa10.1□□□□□ -0.79
SSH2-205ENST00000577483 OPN1MWP04001 364 aa10.1□□□□□ -0.79
SSH2-205ENST00000577483 LPLP06858 475 aa10.1□□□□□ -0.79
SSH2-205ENST00000577483 SNRNP70P08621 437 aaKnown RBP10.1□□□□□ -0.79
SSH2-205ENST00000577483 FAM90A15PP0C7V4 464 aa10.1□□□□□ -0.79
SSH2-205ENST00000577483 FAM90A13PP0C7W8 464 aa10.1□□□□□ -0.79
SSH2-205ENST00000577483 FAM90A14PP0C7W9 464 aa10.1□□□□□ -0.79
SSH2-205ENST00000577483 FAM90A24PP0C7X0 464 aa10.1□□□□□ -0.79
SSH2-205ENST00000577483 OPN1MW2P0DN77 364 aa10.1□□□□□ -0.79
SSH2-205ENST00000577483 OPN1MW3P0DN78 364 aa10.1□□□□□ -0.79
SSH2-205ENST00000577483 IGHV3-43DP0DP04 118 aa10.1□□□□□ -0.79
SSH2-205ENST00000577483 MGMTP16455 207 aa10.1□□□□□ -0.79
SSH2-205ENST00000577483 MNDAP41218 407 aa10.1□□□□□ -0.79
SSH2-205ENST00000577483 LOXL3P58215 753 aa10.1□□□□□ -0.79
SSH2-205ENST00000577483 SLC35A2P78381 396 aa10.1□□□□□ -0.79
SSH2-205ENST00000577483 GABPB1Q06547 395 aaPredicted RBP10.1□□□□□ -0.79
SSH2-205ENST00000577483 IRF3Q14653 427 aa10.1□□□□□ -0.79
SSH2-205ENST00000577483 SIGIRRQ6IA17 410 aa10.1□□□□□ -0.79
SSH2-205ENST00000577483 CDH26Q8IXH8 852 aa10.1□□□□□ -0.79
SSH2-205ENST00000577483 DRAM1Q8N682 238 aa10.1□□□□□ -0.79
SSH2-205ENST00000577483 MRPS24Q96EL2 167 aaKnown RBP10.1□□□□□ -0.79
SSH2-205ENST00000577483 AKR1E2Q96JD6 320 aa10.1□□□□□ -0.79
SSH2-205ENST00000577483 Q96M66 194 aa10.1□□□□□ -0.79
SSH2-205ENST00000577483 PCDHB16Q9NRJ7 776 aa10.1□□□□□ -0.79
SSH2-205ENST00000577483 SC5DO75845 299 aa10.09□□□□□ -0.79
SSH2-205ENST00000577483 MT-ND4P03905 459 aa10.09□□□□□ -0.79
SSH2-205ENST00000577483 GZMHP20718 246 aa10.09□□□□□ -0.79
SSH2-205ENST00000577483 MAPK3P27361 379 aaPredicted RBP10.09□□□□□ -0.79
SSH2-205ENST00000577483 MADCAM1Q13477 382 aa10.09□□□□□ -0.79
SSH2-205ENST00000577483 ACSM3Q53FZ2 586 aa10.09□□□□□ -0.79
SSH2-205ENST00000577483 RAB12Q6IQ22 244 aa10.09□□□□□ -0.79
SSH2-205ENST00000577483 C10orf99Q6UWK7 81 aa10.09□□□□□ -0.79
SSH2-205ENST00000577483 UNQ9370/PRO34162Q6UXP9 181 aa10.09□□□□□ -0.79
SSH2-205ENST00000577483 LRRTM1Q86UE6 522 aa10.09□□□□□ -0.79
SSH2-205ENST00000577483 NDUFA11Q86Y39 141 aa10.09□□□□□ -0.79
SSH2-205ENST00000577483 OR4K15Q8NH41 348 aa10.09□□□□□ -0.79
SSH2-205ENST00000577483 CAPSLQ8WWF8 208 aa10.09□□□□□ -0.79
SSH2-205ENST00000577483 ARL11Q969Q4 196 aa10.09□□□□□ -0.79
SSH2-205ENST00000577483 FAM46BQ96A09 425 aa10.09□□□□□ -0.79
SSH2-205ENST00000577483 TMED9Q9BVK6 235 aa10.09□□□□□ -0.79
SSH2-205ENST00000577483 SELENOIQ9C0D9 397 aa10.09□□□□□ -0.79
SSH2-205ENST00000577483 C12orf77C9JDV5 145 aa10.08□□□□□ -0.8
SSH2-205ENST00000577483 MCRIP1C9JLW8 97 aa10.08□□□□□ -0.8
SSH2-205ENST00000577483 G3V4G9 280 aa10.08□□□□□ -0.8
SSH2-205ENST00000577483 SDCBPO00560 298 aaPredicted RBP10.08□□□□□ -0.8
SSH2-205ENST00000577483 HSD17B6O14756 317 aa10.08□□□□□ -0.8
SSH2-205ENST00000577483 ORC5O43913 435 aa10.08□□□□□ -0.8
SSH2-205ENST00000577483 CRTAPO75718 401 aaPredicted RBP10.08□□□□□ -0.8
SSH2-205ENST00000577483 SPHARQ15513 63 aa10.08□□□□□ -0.8
SSH2-205ENST00000577483 MED22Q15528 200 aa10.08□□□□□ -0.8
SSH2-205ENST00000577483 TCTEX1D4Q5JR98 221 aa10.08□□□□□ -0.8
SSH2-205ENST00000577483 SYT6Q5T7P8 510 aaPredicted RBP10.08□□□□□ -0.8
SSH2-205ENST00000577483 SLC16A12Q6ZSM3 486 aa10.08□□□□□ -0.8
SSH2-205ENST00000577483 GAPTQ8N292 157 aa10.08□□□□□ -0.8
SSH2-205ENST00000577483 OR5AU1Q8NGC0 362 aa10.08□□□□□ -0.8
SSH2-205ENST00000577483 OR10X1Q8NGY0 326 aa10.08□□□□□ -0.8
SSH2-205ENST00000577483 THRSPQ92748 146 aa10.08□□□□□ -0.8
SSH2-205ENST00000577483 MYDGFQ969H8 173 aa10.08□□□□□ -0.8
SSH2-205ENST00000577483 UQCC2Q9BRT2 126 aa10.08□□□□□ -0.8
SSH2-205ENST00000577483 KCNK15Q9H427 330 aa10.08□□□□□ -0.8
SSH2-205ENST00000577483 SPACA1Q9HBV2 294 aa10.08□□□□□ -0.8
SSH2-205ENST00000577483 GFOD1Q9NXC2 390 aa10.08□□□□□ -0.8
SSH2-205ENST00000577483 ETAA1Q9NY74 926 aa10.08□□□□□ -0.8
SSH2-205ENST00000577483 MOB4Q9Y3A3 225 aa10.08□□□□□ -0.8
SSH2-205ENST00000577483 FAM90A10PA6NDY2 464 aa10.07□□□□□ -0.8
SSH2-205ENST00000577483 FAM90A7PA6NKC0 464 aa10.07□□□□□ -0.8
SSH2-205ENST00000577483 FAM90A23PA8MXZ1 464 aa10.07□□□□□ -0.8
SSH2-205ENST00000577483 H3BUI4 141 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms